RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Pdzd9Q9D9M4 266 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Ap1m1P35585 423 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Trpc6Q61143 930 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Cyp24a1Q64441 514 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Msl1Q6PDM1 616 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Tnrc6bQ8BKI2 1810 aaKnown RBP11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 AceP09470 1312 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Tac1P41539 130 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Sap30bpQ02614 308 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Iqsec3Q3TES0 1195 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Pls1Q3V0K9 630 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Prdm4Q80V63 803 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Pank4Q80YV4 820 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Zfp317Q8C0Q5 607 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Q8C5C9 218 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Rbm31yQ9D3U4 565 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Kif13aQ9EQW7 1749 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Rgs22G3UYX5 1258 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Lig1P37913 916 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Hspa9P38647 679 aaKnown RBP11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Nek1P51954 1203 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Stx1bP61264 288 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Mark3Q03141 753 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Atp4aQ64436 1033 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Srrm3Q80WV7 648 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Tbl3Q8C4J7 801 aaKnown RBP11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Strip2Q8C9H6 844 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Riok3Q9DBU3 519 aaKnown RBP11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Gm4758L7N258 96 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Lrrc36Q3V0M2 755 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Sept8Q8CHH9 429 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Ccdc88cQ6VGS5 2009 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Gm6657A0A1B0GRJ3 277 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Olfr310B2RVZ1 332 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Apol6B7ZC55 329 aa11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Cops2P61202 443 aaKnown RBP11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 MarsQ68FL6 902 aaKnown RBP11.51□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Pdzd8B9EJ80 1147 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Ddx55Q6ZPL9 600 aaKnown RBP11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Acot11Q8VHQ9 594 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Creb3l3Q91XE9 479 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Pcdhb2Q91Y00 799 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Depdc5P61460 1591 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Mapk6Q61532 720 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Dnajc6Q80TZ3 938 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Tspyl4Q8VD63 406 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Asxl2Q8BZ32 1370 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Dnmt1P13864 1620 aaKnown RBP11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Ugt1a5B2RT14 529 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Krt72Q6IME9 520 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Trim35Q8C006 501 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Fip1l1Q9D824 581 aaKnown RBP11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Atp7bQ64446 1462 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Pfdn4Q3UWL8 134 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Adat2Q6P6J0 191 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Fam161bQ8CB59 589 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Nek8Q91ZR4 698 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Ndst4Q9EQW8 872 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Neurl4Q5NCX5 1563 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Esr2O08537 530 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Psmd14O35593 310 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Gnat1P20612 350 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Pla2g4aP47713 748 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Jdp2P97875 163 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Znf667Q2TL60 609 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Stxbp3Q60770 592 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Trpc1Q61056 793 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 SrlQ7TQ48 910 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Dars2Q8BIP0 653 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Syde2E9PUP1 1314 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Sdccag3A2AIW0 432 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 C2cd2E9Q3C1 696 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 C1qbpO35658 278 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Yeats2Q3TUF7 1407 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Kat6bQ8BRB7 1872 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Tex13cD3YU32 604 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Serpinb8O08800 374 aaKnown RBP11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Vti1aO89116 217 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Slc9a2Q3ZAS0 814 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Nlrp14Q6B966 993 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Atp2b4Q6Q477 1205 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Erich5Q8K0S2 362 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Grtp1Q9D3N8 359 aa11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Scyl1Q9EQC5 806 aaKnown RBP11.5□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Znf711A2ANX9 761 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Calb1P12658 261 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Hspa1lP16627 641 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 VdrP48281 422 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Smap1Q91VZ6 440 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Q922C1 641 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Galnt15Q9D2N8 638 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 1700029H14RikE9PY36 240 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Letm2Q7TNU7 480 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Tmem119Q8R138 280 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Gucy2eP52785 1108 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Nsun2Q1HFZ0 757 aaKnown RBP11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Nlrx1Q3TL44 975 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Lamc2Q61092 1191 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Pdik1lQ8QZR7 341 aa11.49□□□□□ -0.57
Nipbl-201ENSMUST00000052965 Ccdc103Q9D9P2 237 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms