RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 AdnpQ9Z103 1108 aaKnown RBP16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 A0A286YCQ6 122 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Kcnh2O35219 1162 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 ChkbO55229 394 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rps6ka1P18653 724 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Flt3Q00342 1000 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Oxr1Q4KMM3 866 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Krt14Q61781 484 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ddx19bQ8BZY3 494 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Golph3Q9CRA5 298 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ears2Q9CXJ1 523 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Sept14Q9DA97 430 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 DexiQ9WUQ7 95 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ttc38A3KMP2 465 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gna15P30678 374 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Hnrnph2P70333 449 aaKnown RBP16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Dpcr1Q3TNW5 500 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ttbk2Q3UVR3 1243 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rasa3Q60790 834 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Herc4Q6PAV2 1057 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Tcp10aQ80W76 438 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Dock2Q8C3J5 1828 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Lgi2Q8K4Z0 550 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rnf34Q99KR6 376 aa16.43■□□□□ 0.22
Nup54-201ENSMUST00000038514 Zfp646Q6NV66 1788 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Hnrnph1O35737 449 aaKnown RBP16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 TyrobpO54885 114 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Myo1fP70248 1099 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gdpd4Q3TT99 632 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Slc2a13Q3UHK1 637 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Specc1Q5SXY1 1067 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Tsga10Q6NY15 697 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gga2Q6P5E6 603 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Dpp8Q80YA7 892 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gpcpd1Q8C0L9 675 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Q91Z58 1206 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Arfgap2Q99K28 520 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 4930550L24RikQ99PA7 320 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Stx17Q9D0I4 301 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ebag9Q9D0V7 213 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Cul5Q9D5V5 780 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Vav3Q9R0C8 847 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 EmcnQ9R0H2 261 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gm5737A0A140LI11 423 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Kiaa1522A2A7S8 1013 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Mcm5P49718 733 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rgs9bpQ148R9 237 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 KaznQ69ZS8 779 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Lrrc42Q8R2U7 421 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ces1Q8VCC2 565 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Mettl13Q91YR5 698 aa16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 SetQ9EQU5 289 aaKnown RBP16.42■□□□□ 0.22
Nup54-201ENSMUST00000038514 Osbpl9A2A8Z1 736 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Spocd1B1ASB6 936 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ctnnd1P30999 938 aaKnown RBP16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Serpinc1P32261 465 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Eps15P42567 897 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Hdgfl1Q2VPR5 283 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Q6PD19 689 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Tbx18Q9EPZ6 613 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Irx5Q9JKQ4 484 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Tnip1Q9WUU8 647 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Pitpnm2Q6ZPQ6 1335 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Cetn3O35648 167 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gna14P30677 355 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Nr2f2P43135 414 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Bend4P86174 541 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Cacna2d4Q5RJF7 1116 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Arhgap44Q5SSM3 814 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Foxd1Q61345 456 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Sin3bQ62141 1098 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Lrrcc1Q69ZB0 1026 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Haus6Q6NV99 933 aaKnown RBP16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Dhx37Q6NZL1 1150 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Haus1Q8BHX1 278 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gpr180Q8BPS4 441 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Lsm14bQ8CGC4 385 aaKnown RBP16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Calcoco1Q8CGU1 691 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rbm41Q8JZV4 413 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Atp6v0a4Q920R6 833 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Actn2Q9JI91 894 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Fmnl1Q9JL26 1094 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gkap1Q9JMB0 366 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Cul1Q9WTX6 776 aa16.41■□□□□ 0.22
Nup54-201ENSMUST00000038514 Fam71aB7XG49 585 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Mmp15O54732 657 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Stat3P42227 770 aaKnown RBP16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Cdc25aP48964 514 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rbm46P86049 533 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 RelaQ04207 549 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Muc3aQ3U5A2 218 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Mcf2lQ64096 1149 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Anks6Q6GQX6 883 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ddx10Q80Y44 875 aaKnown RBP16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rassf10Q8BL43 508 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Kiaa0319lQ8K135 1048 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rbm5Q91YE7 815 aaKnown RBP16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Senp2Q91ZX6 588 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 Dhx58Q99J87 678 aa16.4■□□□□ 0.22
Nup54-201ENSMUST00000038514 MefvQ9JJ26 767 aa16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms