RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 ItkQ03526 625 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Map3k10Q66L42 940 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 MtbpQ8BJS8 894 aaKnown RBP24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Dach2Q925Q8 634 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ccdc62E9PVD1 701 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ivns1abpQ920Q8 642 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 GdaQ9R111 454 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Nrg3O35181 713 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Gap43P06837 227 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Pald1P70261 859 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Epc1Q8C9X6 813 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ccdc194A0A140LIT1 234 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Tcp11x2A2AEI7 503 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Lrrc32G3XA59 663 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Krt4P07744 525 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Foxp2P58463 714 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Dpcr1Q3TNW5 500 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ddx31Q6NZQ2 687 aaKnown RBP24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ipo5Q8BKC5 1097 aaKnown RBP24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Heatr3Q8BQM4 679 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Setd3Q91WC0 594 aa24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Bzw1Q9CQC6 419 aaKnown RBP24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Hic2Q9JLZ6 619 aaKnown RBP24.88■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Col1a2Q01149 1372 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Arl4aP61213 200 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ppm1kQ8BXN7 372 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Def8Q99J78 448 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Lrriq4A6H6A4 596 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Lsg1Q3UM18 644 aaKnown RBP24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Bud13Q8R149 637 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Pomgnt1Q91X88 660 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ppp1r2Q9DCL8 206 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Med14A2ABV5 1459 aaKnown RBP24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Aoc3O70423 765 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 GssP51855 474 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Frmd8Q3UFK8 466 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Itih3Q61704 889 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Cdc26Q99JP4 85 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Lins1Q3U1D0 764 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 GypcQ78HU7 95 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 EngaseQ8BX80 734 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Pip4k2cQ91XU3 421 aa24.87■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Gucy2cQ3UWA6 1072 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Large2Q5XPT3 690 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Irak1Q62406 710 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Fbxo18Q8K2I9 1042 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Cyth2P63034 400 aaKnown RBP24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Stambpl1Q76N33 436 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ddx19bQ8BZY3 494 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Frmd4bQ920B0 1035 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Nos1Q9Z0J4 1429 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Gm29133A0A1B0GT72 266 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 1700011I03RikE9PYL8 271 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Patl1Q3TC46 770 aaKnown RBP24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Pramef12Q9D2F1 463 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Trmt44Q9D2Q2 713 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Rnf14Q9JI90 485 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Zfp408H7BX78 710 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Nck2O55033 380 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 G3bp2P97379 482 aaKnown RBP24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Slc7a1Q09143 622 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Sult1d1Q3UZZ6 295 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Elf1Q60775 612 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Kcna6Q61923 529 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ulbp1Q8HWA3 334 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Trmt112Q9DCG9 125 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Zscan12Q9Z1D7 501 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 AlkP97793 1621 aa24.86■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 StrnO55106 780 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Slc26a6Q8CIW6 758 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Apba1B2RUJ5 842 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Zfp212G3X8R7 492 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Lyve1Q8BHC0 318 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Pm20d1Q8C165 503 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 IkbipQ9DBZ1 373 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Srgap2Q91Z67 1071 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Add2Q9QYB8 725 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ap1g2O88512 791 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Bcap29Q61334 240 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Adprhl2Q8CG72 370 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Pnpt1Q8K1R3 783 aaKnown RBP24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Gimap4Q99JY3 219 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Serpinb3bQ9D1Q5 387 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Abca5Q8K448 1642 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Atp10aO54827 1508 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Caprin1Q60865 707 aaKnown RBP24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Zc3h6Q8BYK8 1177 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Snx24Q9CRB0 169 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Rmdn1Q9DCV4 305 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Rnf4Q9QZS2 194 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Peg12Q9WVA7 283 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Map3k4O08648 1597 aa24.85■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Top3aO70157 1003 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Lnx1O70263 728 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Gbp10Q000W5 611 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 GmncQ3URY2 333 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 WaplQ65Z40 1200 aaKnown RBP24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Mcl1P97287 331 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Gsdmc4Q3TR54 480 aa24.84■■□□□ 1.57
Sh3rf1-201ENSMUST00000034060 Ccdc33Q3ULW6 985 aa24.84■■□□□ 1.57
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms