RNA–Protein interactions for RNA: ENSMUST00000022330.8

Ldb3-203, Transcript of LIM domain-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ldb3, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-203ENSMUST00000022330 Pcdhb12Q91Y07 789 aa13.56□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Pcdha7Q91Y13 937 aa13.56□□□□□ -0.24
Ldb3-203ENSMUST00000022330 IydQ9DCX8 285 aa13.56□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Copb1Q9JIF7 953 aa13.56□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Tex21Q9R0U9 575 aa13.56□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Celf2Q9Z0H4 508 aaKnown RBP13.56□□□□□ -0.24
Ldb3-203ENSMUST00000022330 UtrnE9Q6R7 3430 aa13.56□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Cntnap2Q9CPW0 1332 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Pip4k2aO70172 405 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 MyocO70624 490 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Becn1O88597 448 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Idh1O88844 414 aaKnown RBP13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Sox5P35710 763 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Epb41l4aP52963 686 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 CebpzP53569 1052 aaKnown RBP13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Samsn1P57725 372 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Hmgb1P63158 215 aaKnown RBP13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Traf5P70191 558 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Pou2f2Q00196 463 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Sox10Q04888 466 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Specc1lQ2KN98 1118 aaKnown RBP13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Nom1Q3UFM5 854 aaKnown RBP13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Slc9a2Q3ZAS0 814 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Scarf1Q5ND28 820 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Nab2Q61127 525 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Nop9Q8BMC4 636 aaKnown RBP13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Spata32Q8C5V0 334 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Lrrc41Q8K1C9 807 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Pstpip2Q99M15 334 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Lrp2bpQ9D4C6 346 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 PpihQ9D868 188 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 SelenooQ9DBC0 667 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Myl7Q9QVP4 175 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Phtf1Q9QZ09 761 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Btbd19S4R1I0 287 aa13.55□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Gm45208A0A140LJ36 292 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Dhtkd1A2ATU0 921 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Spocd1B1ASB6 936 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Gjd2O54851 321 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Pbx1P41778 430 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Psmc5P62196 406 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 PtgdrP70263 357 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Cep126Q0VBV7 1103 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Olfm4Q3UZZ4 505 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Rnf207Q3V3A7 635 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Trappc3lQ4KL14 181 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Cacna2d4Q5RJF7 1116 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Tbx2Q60707 711 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Cdc37Q61081 379 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Igbp1Q61249 340 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Mcm7Q61881 719 aaKnown RBP13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Tgoln2Q62314 363 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Btnl9Q8BJE2 536 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Arid5bQ8BM75 1188 aaKnown RBP13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Mrpl58Q8R035 206 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 RnpepQ8VCT3 650 aaKnown RBP13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Tbx18Q9EPZ6 613 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Ush1cQ9ES64 910 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Smchd1Q6P5D8 2007 aaKnown RBP13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Zfp984A2A7A2 547 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Gm4985A2ALC6 410 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Lrrc38A2VDH3 298 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Ppef1O35655 650 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Mrgprb1Q3UG61 350 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Eif3j1Q3UGC7 261 aaKnown RBP13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Spdye4aQ5IBH6 268 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Ankrd40Q5SUE8 363 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Ecm1Q61508 559 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 March6Q6ZQ89 909 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Ano2Q8CFW1 1002 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Nxf1Q99JX7 618 aaKnown RBP13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Kif17Q99PW8 1038 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Ribc1Q9D0B8 379 aa13.54□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Rabgap1A2AWA9 1064 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Vmn2r78K7N6U5 853 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Timm44O35857 452 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 GmnnO88513 206 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 UgcgO88693 394 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Cdk4P30285 303 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Hmgcs2P54869 508 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Tpm2P58774 284 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Ly9Q01965 654 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Fgfr4Q03142 799 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Spryd7Q3TFQ1 196 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Naa35Q6PHQ8 725 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Nsun6Q7TS68 476 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Csgalnact2Q8C1F4 542 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Rpap3Q9D706 660 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 AmfrQ9R049 643 aa13.53□□□□□ -0.24
Ldb3-203ENSMUST00000022330 Ace3D0G895 737 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 Wdr78E9PYY5 807 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 Mcm5P49718 733 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 Il6stQ00560 917 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 SelpQ01102 768 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 Wdr70Q3TWF6 657 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 Gm1587Q3UT80 123 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 Gba2Q69ZF3 918 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 Antxr2Q6DFX2 487 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 Msantd2Q6NZR2 559 aa13.52□□□□□ -0.25
Ldb3-203ENSMUST00000022330 D130040H23RikQ8BII3 405 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms