RNA–Protein interactions for RNA: snR83

snR83, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR83, Length 306 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR83	snR83	YGL039W	P53183	348 aa	Known RBP	3.18	□□□□□ -1.9
snR83	snR83	HSP31	Q04432	237 aa		3.18	□□□□□ -1.9
snR83	snR83	TIM18	Q08749	192 aa		3.18	□□□□□ -1.9
snR83	snR83	RRI2	Q12348	645 aa		3.18	□□□□□ -1.9
snR83	snR83	YPK9	Q12697	1472 aa		3.17	□□□□□ -1.9
snR83	snR83	RPI1	P23250	407 aa	Known RBP	3.17	□□□□□ -1.9
snR83	snR83	PPH22	P23595	377 aa		3.17	□□□□□ -1.9
snR83	snR83	DAL2	P25335	343 aa		3.17	□□□□□ -1.9
snR83	snR83	RVS161	P25343	265 aa	Known RBP	3.17	□□□□□ -1.9
snR83	snR83	HXT1	P32465	570 aa		3.17	□□□□□ -1.9
snR83	snR83	SPR1	P32603	445 aa		3.17	□□□□□ -1.9
snR83	snR83	PAN6	P40459	309 aa		3.17	□□□□□ -1.9
snR83	snR83	ECM27	P47144	725 aa		3.17	□□□□□ -1.9
snR83	snR83	YIF1	P53845	314 aa	Known RBP	3.17	□□□□□ -1.9
snR83	snR83	YLR152C	P54072	576 aa		3.17	□□□□□ -1.9
snR83	snR83	HXT11	P54862	567 aa		3.17	□□□□□ -1.9
snR83	snR83	HER2	Q03557	464 aa		3.17	□□□□□ -1.9
snR83	snR83	GIR2	Q03768	265 aa	Predicted RBP	3.17	□□□□□ -1.9
snR83	snR83	PPM1	Q04081	328 aa		3.17	□□□□□ -1.9
snR83	snR83	NUP159	P40477	1460 aa		3.16	□□□□□ -1.9
snR83	snR83	MET17	P06106	444 aa		3.16	□□□□□ -1.9
snR83	snR83	MRP7	P12687	371 aa		3.16	□□□□□ -1.9
snR83	snR83	RPL3	P14126	387 aa	Known RBP	3.16	□□□□□ -1.9
snR83	snR83	ITR1	P30605	584 aa		3.16	□□□□□ -1.9
snR83	snR83	UTP9	P38882	575 aa	Known RBP	3.16	□□□□□ -1.9
snR83	snR83	FRE4	P53746	719 aa		3.16	□□□□□ -1.9
snR83	snR83	GRX6	Q12438	231 aa		3.16	□□□□□ -1.9
snR83	snR83	HIS4	P00815	799 aa	Known RBP	3.15	□□□□□ -1.91
snR83	snR83	SLY1	P22213	666 aa		3.15	□□□□□ -1.91
snR83	snR83	HXT3	P32466	567 aa	Known RBP	3.15	□□□□□ -1.91
snR83	snR83	VHC1	P38329	1120 aa		3.15	□□□□□ -1.91
snR83	snR83	MSG5	P38590	489 aa		3.15	□□□□□ -1.91
snR83	snR83	OTU2	P38747	307 aa	Known RBP	3.15	□□□□□ -1.91
snR83	snR83	SMF1	P38925	575 aa		3.15	□□□□□ -1.91
snR83	snR83	TRP1	P00912	224 aa		3.14	□□□□□ -1.91
snR83	snR83	TOP1	P04786	769 aa		3.14	□□□□□ -1.91
snR83	snR83	GPH1	P06738	902 aa	Known RBP	3.14	□□□□□ -1.91
snR83	snR83	RPS8A	P0CX39	200 aa	Known RBP	3.14	□□□□□ -1.91
snR83	snR83	RPS8B	P0CX40	200 aa	Known RBP	3.14	□□□□□ -1.91
snR83	snR83	MNS1	P32906	549 aa		3.14	□□□□□ -1.91
snR83	snR83	IRC6	P43615	237 aa		3.14	□□□□□ -1.91
snR83	snR83	YMR181C	Q03231	154 aa		3.14	□□□□□ -1.91
snR83	snR83	SIL1	Q08199	421 aa		3.14	□□□□□ -1.91
snR83	snR83	SNX3	Q08826	162 aa	Known RBP	3.14	□□□□□ -1.91
snR83	snR83	NTE1	Q04958	1679 aa		3.14	□□□□□ -1.91
snR83	snR83	TEF1	P02994	458 aa	Known RBP	3.13	□□□□□ -1.91
snR83	snR83	RIP1	P08067	215 aa		3.13	□□□□□ -1.91
snR83	snR83	CKA1	P15790	372 aa		3.13	□□□□□ -1.91
snR83	snR83	ROX1	P25042	368 aa		3.13	□□□□□ -1.91
snR83	snR83	YBR137W	P38276	179 aa		3.13	□□□□□ -1.91
snR83	snR83	YHR054C	P38780	354 aa		3.13	□□□□□ -1.91
snR83	snR83	LYS1	P38998	373 aa	RIP-Chip data	3.13	□□□□□ -1.91	not detected
snR83	snR83	ESL1	P40456	1118 aa		3.13	□□□□□ -1.91
snR83	snR83	SAS2	P40963	338 aa		3.13	□□□□□ -1.91
snR83	snR83	MNP1	P53163	194 aa	Predicted RBP	3.13	□□□□□ -1.91
snR83	snR83	SHY1	P53266	389 aa		3.13	□□□□□ -1.91
snR83	snR83	YNR048W	P53740	393 aa		3.13	□□□□□ -1.91
snR83	snR83	CWC25	P53854	179 aa	Known RBP	3.13	□□□□□ -1.91
snR83	snR83	PEX25	Q02969	394 aa		3.13	□□□□□ -1.91
snR83	snR83	SYF1	Q04048	859 aa	Predicted RBP	3.13	□□□□□ -1.91
snR83	snR83	BUD21	Q08492	214 aa	Predicted RBP	3.13	□□□□□ -1.91
snR83	snR83	TRM732	Q03496	1420 aa		3.12	□□□□□ -1.91
snR83	snR83	MMS22	Q06164	1454 aa		3.12	□□□□□ -1.91
snR83	snR83	SOD1	P00445	154 aa	Known RBP	3.12	□□□□□ -1.91
snR83	snR83	ARG4	P04076	463 aa	Predicted RBP	3.12	□□□□□ -1.91
snR83	snR83	KKQ8	P36004	724 aa		3.12	□□□□□ -1.91
snR83	snR83	MTM1	P53320	366 aa		3.12	□□□□□ -1.91
snR83	snR83	MDG1	P53885	366 aa		3.12	□□□□□ -1.91
snR83	snR83	YMR027W	Q04371	470 aa		3.12	□□□□□ -1.91
snR83	snR83	VTA1	Q06263	330 aa		3.12	□□□□□ -1.91
snR83	snR83	WTM1	Q12363	437 aa	Known RBP	3.12	□□□□□ -1.91
snR83	snR83	TY1B-JR2	P47100	1755 aa	Known RBP	3.12	□□□□□ -1.91
snR83	snR83	TY1B-ER2	Q03619	1755 aa		3.12	□□□□□ -1.91
snR83	snR83	TY1B-MR1	Q04214	1755 aa		3.12	□□□□□ -1.91
snR83	snR83	TY1B-MR2	Q04670	1755 aa	Known RBP	3.12	□□□□□ -1.91
snR83	snR83	TY1B-LR1	Q12088	1755 aa	Known RBP	3.12	□□□□□ -1.91
snR83	snR83	TY1B-NL1	Q12112	1755 aa		3.12	□□□□□ -1.91
snR83	snR83	TY1B-GR1	Q12141	1755 aa		3.12	□□□□□ -1.91
snR83	snR83	TY1B-BL	Q12490	1755 aa		3.12	□□□□□ -1.91
snR83	snR83	NFT1	P0CE68	1218 aa		3.11	□□□□□ -1.91
snR83	snR83	SEC63	P14906	663 aa		3.11	□□□□□ -1.91
snR83	snR83	MUD1	P32605	298 aa	Known RBP	3.11	□□□□□ -1.91
snR83	snR83	HMS2	P47175	358 aa		3.11	□□□□□ -1.91
snR83	snR83	MRPL19	P53875	158 aa		3.11	□□□□□ -1.91
snR83	snR83	SGT1	Q08446	395 aa		3.11	□□□□□ -1.91
snR83	snR83	NUP170	P38181	1502 aa		3.1	□□□□□ -1.91
snR83	snR83	PDR15	Q04182	1529 aa	Known RBP	3.1	□□□□□ -1.91
snR83	snR83	LSB5	P25369	354 aa		3.1	□□□□□ -1.91
snR83	snR83	PRS1	P32895	427 aa	Known RBP	3.1	□□□□□ -1.91
snR83	snR83	HCS1	P34243	683 aa		3.1	□□□□□ -1.91
snR83	snR83	ARA1	P38115	344 aa		3.1	□□□□□ -1.91
snR83	snR83	NDE1	P40215	560 aa		3.1	□□□□□ -1.91
snR83	snR83	RPA49	Q01080	415 aa	Predicted RBP	3.1	□□□□□ -1.91
snR83	snR83	REX4	Q08237	289 aa		3.1	□□□□□ -1.91
snR83	snR83	ORT1	Q12375	292 aa		3.1	□□□□□ -1.91
snR83	snR83	RTN2	Q12443	393 aa		3.1	□□□□□ -1.91
snR83	snR83	SPO14	P36126	1683 aa		3.09	□□□□□ -1.91
snR83	snR83	NAT1	P12945	854 aa	Known RBP	3.09	□□□□□ -1.91
snR83	snR83	POP5	P28005	173 aa		3.09	□□□□□ -1.91
snR83	snR83	SAS3	P34218	831 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 27 ms