RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 AIM36Q03798 255 aa-0.72□□□□□ -2.52
snR38snR38 SOV1Q04748 898 aa-0.72□□□□□ -2.52
snR38snR38 EIS1Q05050 843 aaKnown RBP-0.72□□□□□ -2.52
snR38snR38 PHM6Q05637 104 aa-0.72□□□□□ -2.52
snR38snR38 RTT109Q07794 436 aa-0.72□□□□□ -2.52
snR38snR38 NUS1Q12063 375 aa-0.72□□□□□ -2.52
snR38snR38 YOR012WQ12351 137 aa-0.72□□□□□ -2.52
snR38snR38 SNU66Q12420 587 aaPredicted RBP-0.72□□□□□ -2.52
snR38snR38 MET2P08465 486 aa-0.73□□□□□ -2.53
snR38snR38 HPR1P17629 752 aaKnown RBP-0.73□□□□□ -2.53
snR38snR38 EPT1P22140 391 aa-0.73□□□□□ -2.53
snR38snR38 IMG1P25626 169 aa-0.73□□□□□ -2.53
snR38snR38 SOL2P37262 315 aa-0.73□□□□□ -2.53
snR38snR38 RBG1P39729 369 aa-0.73□□□□□ -2.53
snR38snR38 POP1P41812 875 aa-0.73□□□□□ -2.53
snR38snR38 YJL027CP47063 138 aaPredicted RBP-0.73□□□□□ -2.53
snR38snR38 YIP1P53039 248 aa-0.73□□□□□ -2.53
snR38snR38 COG1P53079 417 aa-0.73□□□□□ -2.53
snR38snR38 TOF2Q02208 771 aa-0.73□□□□□ -2.53
snR38snR38 CGI121Q03705 181 aaKnown RBP-0.73□□□□□ -2.53
snR38snR38 SKG3Q06315 1026 aa-0.73□□□□□ -2.53
snR38snR38 TPK1P06244 397 aa-0.74□□□□□ -2.53
snR38snR38 PEP4P07267 405 aaKnown RBP-0.74□□□□□ -2.53
snR38snR38 PUP3P25451 205 aaKnown RBP-0.74□□□□□ -2.53
snR38snR38 PAP1P29468 568 aaKnown RBP-0.74□□□□□ -2.53
snR38snR38 TCD2P36101 447 aaKnown RBP-0.74□□□□□ -2.53
snR38snR38 COX14P39103 70 aa-0.74□□□□□ -2.53
snR38snR38 LSM4P40070 187 aaKnown RBP-0.74□□□□□ -2.53
snR38snR38 SYG1P40528 902 aa-0.74□□□□□ -2.53
snR38snR38 CPR6P53691 371 aaKnown RBP-0.74□□□□□ -2.53
snR38snR38 YNR048WP53740 393 aa-0.74□□□□□ -2.53
snR38snR38 STD1Q02794 444 aa-0.74□□□□□ -2.53
snR38snR38 YML131WQ03102 365 aa-0.74□□□□□ -2.53
snR38snR38 MSC1Q03104 513 aa-0.74□□□□□ -2.53
snR38snR38 FAR1P21268 830 aa-0.75□□□□□ -2.53
snR38snR38 PWP1P21304 576 aaKnown RBP-0.75□□□□□ -2.53
snR38snR38 ANR2P36090 516 aaPredicted RBP-0.75□□□□□ -2.53
snR38snR38 PTI1P39927 425 aaPredicted RBP-0.75□□□□□ -2.53
snR38snR38 JLP2P40206 208 aa-0.75□□□□□ -2.53
snR38snR38 AIP1P46680 615 aaKnown RBP-0.75□□□□□ -2.53
snR38snR38 RPL37AP49166 88 aaKnown RBP-0.75□□□□□ -2.53
snR38snR38 TOS2P50078 622 aa-0.75□□□□□ -2.53
snR38snR38 PEX14P53112 341 aa-0.75□□□□□ -2.53
snR38snR38 EFM6P53970 246 aa-0.75□□□□□ -2.53
snR38snR38 SMC5Q08204 1093 aa-0.75□□□□□ -2.53
snR38snR38 SGT1Q08446 395 aa-0.75□□□□□ -2.53
snR38snR38 TY3A-GQ12173 290 aa-0.75□□□□□ -2.53
snR38snR38 COX17Q12287 69 aa-0.75□□□□□ -2.53
snR38snR38 TY3A-IQ99219 290 aa-0.75□□□□□ -2.53
snR38snR38 YOL085CQ99345 113 aa-0.75□□□□□ -2.53
snR38snR38 HSC82P15108 705 aaKnown RBP-0.76□□□□□ -2.53
snR38snR38 COX10P21592 462 aa-0.76□□□□□ -2.53
snR38snR38 RAD23P32628 398 aaKnown RBP-0.76□□□□□ -2.53
snR38snR38 KDX1P36005 433 aa-0.76□□□□□ -2.53
snR38snR38 AIM24P47127 394 aa-0.76□□□□□ -2.53
snR38snR38 VPS4P52917 437 aa-0.76□□□□□ -2.53
snR38snR38 VID30P53076 958 aa-0.76□□□□□ -2.53
snR38snR38 PAP2P53632 584 aaKnown RBP-0.76□□□□□ -2.53
snR38snR38 RIM20Q12033 661 aa-0.76□□□□□ -2.53
snR38snR38 YPR063CQ12160 140 aa-0.76□□□□□ -2.53
snR38snR38 YHR086W-AQ3E746 53 aa-0.76□□□□□ -2.53
snR38snR38 TDH2P00358 332 aaKnown RBP-0.77□□□□□ -2.53
snR38snR38 TDH3P00359 332 aaKnown RBP RIP-Chip data-0.77□□□□□ -2.53not detected
snR38snR38 CUP2P15315 225 aa-0.77□□□□□ -2.53
snR38snR38 CLB4P24871 460 aa-0.77□□□□□ -2.53
snR38snR38 SYN8P31377 255 aa-0.77□□□□□ -2.53
snR38snR38 TFB1P32776 642 aa-0.77□□□□□ -2.53
snR38snR38 CLB6P32943 380 aa-0.77□□□□□ -2.53
snR38snR38 YCH1P42937 148 aa-0.77□□□□□ -2.53
snR38snR38 AIM22P47051 409 aa-0.77□□□□□ -2.53
snR38snR38 ECM27P47144 725 aa-0.77□□□□□ -2.53
snR38snR38 FRE4P53746 719 aa-0.77□□□□□ -2.53
snR38snR38 BCH1Q05029 724 aa-0.77□□□□□ -2.53
snR38snR38 ASA1Q06822 443 aa-0.77□□□□□ -2.53
snR38snR38 LOT6Q07923 191 aa-0.77□□□□□ -2.53
snR38snR38 KRE1P17260 313 aa-0.78□□□□□ -2.53
snR38snR38 ERG8P24521 451 aa-0.78□□□□□ -2.53
snR38snR38 ITR1P30605 584 aa-0.78□□□□□ -2.53
snR38snR38 SPS19P32573 292 aaKnown RBP-0.78□□□□□ -2.53
snR38snR38 PDC2P32896 925 aa-0.78□□□□□ -2.53
snR38snR38 YBR144CP34215 104 aa-0.78□□□□□ -2.53
snR38snR38 SMP1P38128 452 aa-0.78□□□□□ -2.53
snR38snR38 RRT13P40042 185 aa-0.78□□□□□ -2.53
snR38snR38 UFE1P41834 346 aa-0.78□□□□□ -2.53
snR38snR38 PET130P47065 347 aa-0.78□□□□□ -2.53
snR38snR38 DAN1P47178 298 aa-0.78□□□□□ -2.53
snR38snR38 APT1P49435 187 aaKnown RBP-0.78□□□□□ -2.53
snR38snR38 AZR1P50080 613 aa-0.78□□□□□ -2.53
snR38snR38 MRM2P53123 320 aa-0.78□□□□□ -2.53
snR38snR38 TEP1P53916 434 aa-0.78□□□□□ -2.53
snR38snR38 NCS2P53923 493 aaPredicted RBP-0.78□□□□□ -2.53
snR38snR38 VMS1Q04311 632 aaKnown RBP-0.78□□□□□ -2.53
snR38snR38 PSK2Q08217 1101 aa-0.78□□□□□ -2.53
snR38snR38 RAV1P47104 1357 aa-0.79□□□□□ -2.54
snR38snR38 SSB1P11484 613 aaKnown RBP-0.79□□□□□ -2.54
snR38snR38 CTA1P15202 515 aa-0.79□□□□□ -2.54
snR38snR38 ATP11P32453 318 aa-0.79□□□□□ -2.54
snR38snR38 SBE22P38814 852 aa-0.79□□□□□ -2.54
snR38snR38 SSB2P40150 613 aaKnown RBP-0.79□□□□□ -2.54
snR38snR38 SLZ1P40167 298 aa-0.79□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms