RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W RPT3P33298 428 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W PRP18P33411 251 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W MAC1P35192 417 aa2.14□□□□□ -2.07
SEC16YPL085W DHR2P36009 735 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W YKL077WP36081 392 aa2.14□□□□□ -2.07
SEC16YPL085W BAP2P38084 609 aa2.14□□□□□ -2.07
SEC16YPL085W NTC20P38302 140 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W OSH7P38755 437 aa2.14□□□□□ -2.07
SEC16YPL085W XDJ1P39102 459 aa2.14□□□□□ -2.07
SEC16YPL085W NOP16P40007 231 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W ART5P53244 586 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W LSM3P57743 89 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W GCN5Q03330 439 aa2.14□□□□□ -2.07
SEC16YPL085W RAD30Q04049 632 aa2.14□□□□□ -2.07
SEC16YPL085W CDA1Q06702 301 aa2.14□□□□□ -2.07
SEC16YPL085W FDH1Q08911 376 aa2.14□□□□□ -2.07
SEC16YPL085W AHC1Q12433 566 aa2.14□□□□□ -2.07
SEC16YPL085W ATP6P00854 259 aa2.14□□□□□ -2.07
SEC16YPL085W PRP2P20095 876 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W BUD5P25300 642 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W YCL049CP25577 312 aa2.14□□□□□ -2.07
SEC16YPL085W POT1P27796 417 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SEC16YPL085W CAP1P28495 268 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W MRPL6P32904 214 aa2.14□□□□□ -2.07
SEC16YPL085W ICS2P38284 255 aa2.14□□□□□ -2.07
SEC16YPL085W TAT2P38967 592 aa2.14□□□□□ -2.07
SEC16YPL085W UBP5P39944 805 aa2.14□□□□□ -2.07
SEC16YPL085W LYS12P40495 371 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W SER33P40510 469 aa2.14□□□□□ -2.07
SEC16YPL085W DUS1P53759 423 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W YMR034CQ05131 434 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W ORM2Q06144 216 aa2.14□□□□□ -2.07
SEC16YPL085W SIA1Q12212 622 aa2.14□□□□□ -2.07
SEC16YPL085W JLP1Q12358 412 aa2.14□□□□□ -2.07
SEC16YPL085W TRM10Q12400 293 aa2.14□□□□□ -2.07
SEC16YPL085W RAD7P06779 565 aa2.14□□□□□ -2.07
SEC16YPL085W SST2P11972 698 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W GLN4P13188 809 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W CBS1P14066 229 aa2.14□□□□□ -2.07
SEC16YPL085W UGA1P17649 471 aa2.14□□□□□ -2.07
SEC16YPL085W VMA16P23968 213 aa2.14□□□□□ -2.07
SEC16YPL085W RPC19P28000 142 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W CDC13P32797 924 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W SLC1P33333 303 aa2.14□□□□□ -2.07
SEC16YPL085W NUP120P35729 1037 aa2.14□□□□□ -2.07
SEC16YPL085W ETR1P38071 380 aa2.14□□□□□ -2.07
SEC16YPL085W DED81P38707 554 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W GIM4P40005 111 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W FAF1P40546 346 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W OPT1P40897 799 aa2.14□□□□□ -2.07
SEC16YPL085W PHB2P50085 310 aa2.14□□□□□ -2.07
SEC16YPL085W ATP22P50273 684 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W SNF12P53628 566 aa2.14□□□□□ -2.07
SEC16YPL085W NOC4Q06512 552 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W HRD1Q08109 551 aa2.14□□□□□ -2.07
SEC16YPL085W YOL075CQ08234 1294 aa2.14□□□□□ -2.07
SEC16YPL085W ZEO1Q08245 113 aa2.14□□□□□ -2.07
SEC16YPL085W YOR365CQ08844 703 aa2.14□□□□□ -2.07
SEC16YPL085W MLH3Q12083 715 aa2.14□□□□□ -2.07
SEC16YPL085W YAR066WP0CX18 203 aa2.14□□□□□ -2.07
SEC16YPL085W YHR214WP0CX19 203 aa2.14□□□□□ -2.07
SEC16YPL085W PDA1P16387 420 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W SEC2P17065 759 aa2.14□□□□□ -2.07
SEC16YPL085W VAN1P23642 535 aa2.14□□□□□ -2.07
SEC16YPL085W RIM2P38127 377 aa2.14□□□□□ -2.07
SEC16YPL085W TRR2P38816 342 aa2.14□□□□□ -2.07
SEC16YPL085W ACO2P39533 789 aa2.14□□□□□ -2.07
SEC16YPL085W GDH3P39708 457 aa2.14□□□□□ -2.07
SEC16YPL085W EAF6P47128 113 aa2.14□□□□□ -2.07
SEC16YPL085W FRE4P53746 719 aa2.14□□□□□ -2.07
SEC16YPL085W IBD2P53892 351 aa2.14□□□□□ -2.07
SEC16YPL085W DYN3Q04949 312 aa2.14□□□□□ -2.07
SEC16YPL085W MRPL51Q06090 140 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W THP3Q12049 470 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W YPL066WQ12194 479 aa2.14□□□□□ -2.07
SEC16YPL085W TRP4P07285 380 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W CDC3P32457 520 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W BCS1P32839 456 aa2.14□□□□□ -2.07
SEC16YPL085W PET112P33893 541 aa2.14□□□□□ -2.07
SEC16YPL085W IST2P38250 946 aa2.14□□□□□ -2.07
SEC16YPL085W PEX32P38292 413 aa2.14□□□□□ -2.07
SEC16YPL085W VMA22P38784 181 aa2.14□□□□□ -2.07
SEC16YPL085W YHR138CP38841 114 aaPredicted RBP2.14□□□□□ -2.07
SEC16YPL085W BAT1P38891 393 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W ELO1P39540 310 aa2.14□□□□□ -2.07
SEC16YPL085W SEN34P39707 275 aa2.14□□□□□ -2.07
SEC16YPL085W GAB1P41733 394 aa2.14□□□□□ -2.07
SEC16YPL085W ATG36P46983 293 aa2.14□□□□□ -2.07
SEC16YPL085W SRB7P47822 140 aa2.14□□□□□ -2.07
SEC16YPL085W ARI1P53111 347 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W BUD9P53226 547 aa2.14□□□□□ -2.07
SEC16YPL085W MRPS16Q02608 121 aa2.14□□□□□ -2.07
SEC16YPL085W YPL113CQ02961 396 aa2.14□□□□□ -2.07
SEC16YPL085W SCS7Q03529 384 aa2.14□□□□□ -2.07
SEC16YPL085W RAD33Q04231 177 aa2.14□□□□□ -2.07
SEC16YPL085W MFB1Q04922 465 aa2.14□□□□□ -2.07
SEC16YPL085W BOP2Q06150 570 aa2.14□□□□□ -2.07
SEC16YPL085W SIL1Q08199 421 aa2.14□□□□□ -2.07
SEC16YPL085W YRR1Q12172 810 aa2.14□□□□□ -2.07
SEC16YPL085W HSP42Q12329 375 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms