RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeastyeast

Gene RPB8, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB8YOR224C VTC2P43585 828 aa3.48□□□□□ -1.85
RPB8YOR224C IBD2P53892 351 aa3.48□□□□□ -1.85
RPB8YOR224C PAL1Q05518 499 aaKnown RBP3.48□□□□□ -1.85
RPB8YOR224C NUP192P47054 1683 aa3.48□□□□□ -1.85
RPB8YOR224C RPI1P23250 407 aaKnown RBP3.47□□□□□ -1.85
RPB8YOR224C RNA14P25298 677 aaKnown RBP3.47□□□□□ -1.85
RPB8YOR224C NAM9P27929 486 aa3.47□□□□□ -1.85
RPB8YOR224C APE2P32454 952 aaKnown RBP3.47□□□□□ -1.85
RPB8YOR224C RPN12P32496 274 aa3.47□□□□□ -1.85
RPB8YOR224C GYP6P32806 458 aa3.47□□□□□ -1.85
RPB8YOR224C SEC66P33754 206 aa3.47□□□□□ -1.85
RPB8YOR224C NCA3P46955 337 aa3.47□□□□□ -1.85
RPB8YOR224C YIP1P53039 248 aa3.47□□□□□ -1.85
RPB8YOR224C ARK1P53974 638 aa3.47□□□□□ -1.85
RPB8YOR224C RQC1Q05468 723 aaKnown RBP3.47□□□□□ -1.85
RPB8YOR224C TY3B-IQ7LHG5 1498 aaKnown RBP3.47□□□□□ -1.85
RPB8YOR224C SRV2P17555 526 aaKnown RBP3.46□□□□□ -1.86
RPB8YOR224C RIB5P38145 238 aa3.46□□□□□ -1.86
RPB8YOR224C VHC1P38329 1120 aa3.46□□□□□ -1.86
RPB8YOR224C PTH1P38876 190 aaKnown RBP3.46□□□□□ -1.86
RPB8YOR224C SMF1P38925 575 aa3.46□□□□□ -1.86
RPB8YOR224C YMR147WP40218 223 aaKnown RBP3.46□□□□□ -1.86
RPB8YOR224C OST1P41543 476 aaKnown RBP3.46□□□□□ -1.86
RPB8YOR224C LAM5P43560 674 aa3.46□□□□□ -1.86
RPB8YOR224C RRT5P43607 289 aa3.46□□□□□ -1.86
RPB8YOR224C ART5P53244 586 aaKnown RBP3.46□□□□□ -1.86
RPB8YOR224C ELP3Q02908 557 aaKnown RBP3.46□□□□□ -1.86
RPB8YOR224C HSP31Q04432 237 aa3.46□□□□□ -1.86
RPB8YOR224C TSR1Q07381 788 aaKnown RBP3.46□□□□□ -1.86
RPB8YOR224C RED1P14291 827 aa3.45□□□□□ -1.86
RPB8YOR224C SDH3P33421 198 aa3.45□□□□□ -1.86
RPB8YOR224C ESL1P40456 1118 aa3.45□□□□□ -1.86
RPB8YOR224C IRC6P43615 237 aa3.45□□□□□ -1.86
RPB8YOR224C SSN8P47821 323 aa3.45□□□□□ -1.86
RPB8YOR224C JJJ1P53863 590 aa3.45□□□□□ -1.86
RPB8YOR224C MRP51Q02950 344 aa3.45□□□□□ -1.86
RPB8YOR224C TAP42Q04372 366 aa3.45□□□□□ -1.86
RPB8YOR224C VTA1Q06263 330 aa3.45□□□□□ -1.86
RPB8YOR224C RRP12Q12754 1228 aaKnown RBP3.45□□□□□ -1.86
RPB8YOR224C YLR278CQ05854 1341 aa3.44□□□□□ -1.86
RPB8YOR224C CLB3P24870 427 aa3.44□□□□□ -1.86
RPB8YOR224C ROX1P25042 368 aa3.44□□□□□ -1.86
RPB8YOR224C LDB16P25587 256 aa3.44□□□□□ -1.86
RPB8YOR224C YEL045CP32616 141 aa3.44□□□□□ -1.86
RPB8YOR224C NIP100P33420 868 aa3.44□□□□□ -1.86
RPB8YOR224C HCS1P34243 683 aa3.44□□□□□ -1.86
RPB8YOR224C TRS85P46944 698 aa3.44□□□□□ -1.86
RPB8YOR224C ECM27P47144 725 aa3.44□□□□□ -1.86
RPB8YOR224C SHE10P53075 577 aa3.44□□□□□ -1.86
RPB8YOR224C TOF1P53840 1238 aa3.44□□□□□ -1.86
RPB8YOR224C COG4Q06096 861 aa3.44□□□□□ -1.86
RPB8YOR224C SIL1Q08199 421 aa3.44□□□□□ -1.86
RPB8YOR224C YPR022CQ12139 1133 aa3.44□□□□□ -1.86
RPB8YOR224C PKH2Q12236 1081 aaKnown RBP3.44□□□□□ -1.86
RPB8YOR224C GRX6Q12438 231 aa3.44□□□□□ -1.86
RPB8YOR224C YLR419WQ06698 1435 aaKnown RBP3.44□□□□□ -1.86
RPB8YOR224C SPS22P25380 463 aa3.43□□□□□ -1.86
RPB8YOR224C YIM1P28625 365 aa3.43□□□□□ -1.86
RPB8YOR224C HXT3P32466 567 aaKnown RBP3.43□□□□□ -1.86
RPB8YOR224C PRP21P32524 280 aaPredicted RBP3.43□□□□□ -1.86
RPB8YOR224C STB6P36085 766 aa3.43□□□□□ -1.86
RPB8YOR224C MRPL4P36517 319 aa3.43□□□□□ -1.86
RPB8YOR224C ARA1P38115 344 aa3.43□□□□□ -1.86
RPB8YOR224C NAB3P38996 802 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
RPB8YOR224C TFG2P41896 400 aaPredicted RBP3.43□□□□□ -1.86
RPB8YOR224C FRE4P53746 719 aa3.43□□□□□ -1.86
RPB8YOR224C ADD37Q03233 198 aa3.43□□□□□ -1.86
RPB8YOR224C REX4Q08237 289 aa3.43□□□□□ -1.86
RPB8YOR224C TIM18Q08749 192 aa3.43□□□□□ -1.86
RPB8YOR224C RTN2Q12443 393 aa3.43□□□□□ -1.86
RPB8YOR224C PSK1P31374 1356 aa3.42□□□□□ -1.86
RPB8YOR224C GPH1P06738 902 aaKnown RBP3.42□□□□□ -1.86
RPB8YOR224C ECM25P32525 599 aa3.42□□□□□ -1.86
RPB8YOR224C SAS3P34218 831 aa3.42□□□□□ -1.86
RPB8YOR224C YHR054CP38780 354 aa3.42□□□□□ -1.86
RPB8YOR224C MTC6P38849 526 aa3.42□□□□□ -1.86
RPB8YOR224C MST28P39552 234 aa3.42□□□□□ -1.86
RPB8YOR224C YGR210CP42942 411 aa3.42□□□□□ -1.86
RPB8YOR224C BTN2P53286 410 aa3.42□□□□□ -1.86
RPB8YOR224C KTR5P53966 522 aaPredicted RBP3.42□□□□□ -1.86
RPB8YOR224C HIS4P00815 799 aaKnown RBP3.41□□□□□ -1.86
RPB8YOR224C SLY1P22213 666 aa3.41□□□□□ -1.86
RPB8YOR224C TIP1P27654 210 aaPredicted RBP3.41□□□□□ -1.86
RPB8YOR224C MIX23P38162 196 aa3.41□□□□□ -1.86
RPB8YOR224C RFS1P38234 210 aaKnown RBP3.41□□□□□ -1.86
RPB8YOR224C FMS1P50264 508 aa3.41□□□□□ -1.86
RPB8YOR224C SYF1Q04048 859 aaPredicted RBP3.41□□□□□ -1.86
RPB8YOR224C YLR287CQ05881 355 aa3.41□□□□□ -1.86
RPB8YOR224C ERV2Q12284 196 aa3.41□□□□□ -1.86
RPB8YOR224C RRD2Q12461 358 aa3.41□□□□□ -1.86
RPB8YOR224C TEF1P02994 458 aaKnown RBP3.4□□□□□ -1.87
RPB8YOR224C ARG4P04076 463 aaPredicted RBP3.4□□□□□ -1.87
RPB8YOR224C ARO2P28777 376 aaKnown RBP3.4□□□□□ -1.87
RPB8YOR224C PIM1P36775 1133 aa3.4□□□□□ -1.87
RPB8YOR224C NTC20P38302 140 aaPredicted RBP3.4□□□□□ -1.87
RPB8YOR224C LYS1P38998 373 aaRIP-Chip data3.4□□□□□ -1.87not detected
RPB8YOR224C CCT2P39076 527 aaKnown RBP3.4□□□□□ -1.87
RPB8YOR224C PRM5P40476 318 aa3.4□□□□□ -1.87
RPB8YOR224C RPS0BP46654 252 aaKnown RBP3.4□□□□□ -1.87
RPB8YOR224C DLD2P46681 530 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms