RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeast

Gene SME1, Length 285 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SME1	YOR159C	YIL067C	P40514	678 aa		3.22	□□□□□ -1.89
SME1	YOR159C	GCD10	P41814	478 aa		3.22	□□□□□ -1.89
SME1	YOR159C	RRN11	Q04712	507 aa		3.22	□□□□□ -1.89
SME1	YOR159C	YOR387C	Q08910	206 aa		3.22	□□□□□ -1.89
SME1	YOR159C	YPL199C	Q08954	240 aa		3.22	□□□□□ -1.89
SME1	YOR159C	MED1	Q12321	566 aa		3.22	□□□□□ -1.89
SME1	YOR159C	HHF1	P02309	103 aa	Known RBP	3.21	□□□□□ -1.9
SME1	YOR159C	ARG3	P05150	338 aa		3.21	□□□□□ -1.9
SME1	YOR159C	MRP7	P12687	371 aa		3.21	□□□□□ -1.9
SME1	YOR159C	SPT15	P13393	240 aa	Known RBP	3.21	□□□□□ -1.9
SME1	YOR159C	RAD14	P28519	371 aa		3.21	□□□□□ -1.9
SME1	YOR159C	HXT14	P42833	540 aa		3.21	□□□□□ -1.9
SME1	YOR159C	ARK1	P53974	638 aa		3.21	□□□□□ -1.9
SME1	YOR159C	PNG1	Q02890	363 aa		3.21	□□□□□ -1.9
SME1	YOR159C	ODC1	Q03028	310 aa		3.21	□□□□□ -1.9
SME1	YOR159C	PBA1	Q05778	276 aa		3.21	□□□□□ -1.9
SME1	YOR159C	ESA1	Q08649	445 aa		3.21	□□□□□ -1.9
SME1	YOR159C	RRI2	Q12348	645 aa		3.21	□□□□□ -1.9
SME1	YOR159C	RRP12	Q12754	1228 aa	Known RBP	3.21	□□□□□ -1.9
SME1	YOR159C	SPB1	P25582	841 aa	Predicted RBP	3.2	□□□□□ -1.9
SME1	YOR159C	IDH2	P28241	369 aa	Known RBP	3.2	□□□□□ -1.9
SME1	YOR159C	GPI10	P30777	616 aa		3.2	□□□□□ -1.9
SME1	YOR159C	SEC66	P33754	206 aa		3.2	□□□□□ -1.9
SME1	YOR159C	RRT5	P43607	289 aa		3.2	□□□□□ -1.9
SME1	YOR159C	YGR149W	P48236	432 aa		3.2	□□□□□ -1.9
SME1	YOR159C	RMD9	P53140	646 aa	Known RBP	3.2	□□□□□ -1.9
SME1	YOR159C	GOR1	P53839	350 aa		3.2	□□□□□ -1.9
SME1	YOR159C	IBD2	P53892	351 aa		3.2	□□□□□ -1.9
SME1	YOR159C	NCS2	P53923	493 aa	Predicted RBP	3.2	□□□□□ -1.9
SME1	YOR159C	BUD21	Q08492	214 aa	Predicted RBP	3.2	□□□□□ -1.9
SME1	YOR159C	MUM3	Q08750	479 aa		3.2	□□□□□ -1.9
SME1	YOR159C	THP3	Q12049	470 aa	Known RBP	3.2	□□□□□ -1.9
SME1	YOR159C	BUG1	Q12191	341 aa		3.2	□□□□□ -1.9
SME1	YOR159C	CHS1	P08004	1131 aa		3.19	□□□□□ -1.9
SME1	YOR159C	NAM9	P27929	486 aa		3.19	□□□□□ -1.9
SME1	YOR159C	GYP6	P32806	458 aa		3.19	□□□□□ -1.9
SME1	YOR159C	UTP9	P38882	575 aa	Known RBP	3.19	□□□□□ -1.9
SME1	YOR159C	YMR147W	P40218	223 aa	Known RBP	3.19	□□□□□ -1.9
SME1	YOR159C	DSL1	P53847	754 aa		3.19	□□□□□ -1.9
SME1	YOR159C	YLR108C	Q12259	485 aa		3.19	□□□□□ -1.9
SME1	YOR159C	AHC1	Q12433	566 aa		3.19	□□□□□ -1.9
SME1	YOR159C	RPL40A	P0CH08	128 aa	Known RBP	3.18	□□□□□ -1.9
SME1	YOR159C	RPL40B	P0CH09	128 aa	Known RBP	3.18	□□□□□ -1.9
SME1	YOR159C	SAM1	P10659	382 aa	Known RBP	3.18	□□□□□ -1.9
SME1	YOR159C	ATP10	P18496	279 aa		3.18	□□□□□ -1.9
SME1	YOR159C	SAM2	P19358	384 aa	Known RBP	3.18	□□□□□ -1.9
SME1	YOR159C	CPR4	P25334	318 aa		3.18	□□□□□ -1.9
SME1	YOR159C	YCR041W	P37265	110 aa		3.18	□□□□□ -1.9
SME1	YOR159C	THI2	P38141	450 aa		3.18	□□□□□ -1.9
SME1	YOR159C	RFS1	P38234	210 aa	Known RBP	3.18	□□□□□ -1.9
SME1	YOR159C	OTU2	P38747	307 aa	Known RBP	3.18	□□□□□ -1.9
SME1	YOR159C	MET18	P40469	1032 aa		3.18	□□□□□ -1.9
SME1	YOR159C	WWM1	P43582	211 aa	Known RBP	3.18	□□□□□ -1.9
SME1	YOR159C	ART5	P53244	586 aa	Known RBP	3.18	□□□□□ -1.9
SME1	YOR159C	PCP1	P53259	346 aa		3.18	□□□□□ -1.9
SME1	YOR159C	ELP3	Q02908	557 aa	Known RBP	3.18	□□□□□ -1.9
SME1	YOR159C	MRP51	Q02950	344 aa		3.18	□□□□□ -1.9
SME1	YOR159C	GIR2	Q03768	265 aa	Predicted RBP	3.18	□□□□□ -1.9
SME1	YOR159C	SPS4	P09937	338 aa		3.17	□□□□□ -1.9
SME1	YOR159C	APE3	P37302	537 aa	Known RBP	3.17	□□□□□ -1.9
SME1	YOR159C	SHC1	P39000	512 aa		3.17	□□□□□ -1.9
SME1	YOR159C	YGR210C	P42942	411 aa		3.17	□□□□□ -1.9
SME1	YOR159C	VTC2	P43585	828 aa		3.17	□□□□□ -1.9
SME1	YOR159C	SSN8	P47821	323 aa		3.17	□□□□□ -1.9
SME1	YOR159C	BTN2	P53286	410 aa		3.17	□□□□□ -1.9
SME1	YOR159C	JJJ1	P53863	590 aa		3.17	□□□□□ -1.9
SME1	YOR159C	TAP42	Q04372	366 aa		3.17	□□□□□ -1.9
SME1	YOR159C	RQC1	Q05468	723 aa	Known RBP	3.17	□□□□□ -1.9
SME1	YOR159C	PAL1	Q05518	499 aa	Known RBP	3.17	□□□□□ -1.9
SME1	YOR159C	ERV2	Q12284	196 aa		3.17	□□□□□ -1.9
SME1	YOR159C	ARO2	P28777	376 aa	Known RBP	3.16	□□□□□ -1.9
SME1	YOR159C	YEL045C	P32616	141 aa		3.16	□□□□□ -1.9
SME1	YOR159C	SDH3	P33421	198 aa		3.16	□□□□□ -1.9
SME1	YOR159C	PTH1	P38876	190 aa	Known RBP	3.16	□□□□□ -1.9
SME1	YOR159C	PRE5	P40302	234 aa	Known RBP	3.16	□□□□□ -1.9
SME1	YOR159C	LAM5	P43560	674 aa		3.16	□□□□□ -1.9
SME1	YOR159C	TRS85	P46944	698 aa		3.16	□□□□□ -1.9
SME1	YOR159C	YIP1	P53039	248 aa		3.16	□□□□□ -1.9
SME1	YOR159C	YDR387C	Q04162	555 aa		3.16	□□□□□ -1.9
SME1	YOR159C	TSR1	Q07381	788 aa	Known RBP	3.16	□□□□□ -1.9
SME1	YOR159C	PMD1	P32634	1753 aa		3.15	□□□□□ -1.9
SME1	YOR159C	ACC1	Q00955	2233 aa	Known RBP	3.15	□□□□□ -1.9
SME1	YOR159C	SUP35	P05453	685 aa	Known RBP	3.15	□□□□□ -1.91
SME1	YOR159C	MET17	P06106	444 aa		3.15	□□□□□ -1.91
SME1	YOR159C	RPL3	P14126	387 aa	Known RBP	3.15	□□□□□ -1.91
SME1	YOR159C	CKA1	P15790	372 aa		3.15	□□□□□ -1.91
SME1	YOR159C	ICL1	P28240	557 aa	Predicted RBP	3.15	□□□□□ -1.91
SME1	YOR159C	APE2	P32454	952 aa	Known RBP	3.15	□□□□□ -1.91
SME1	YOR159C	NIP100	P33420	868 aa		3.15	□□□□□ -1.91
SME1	YOR159C	MIX23	P38162	196 aa		3.15	□□□□□ -1.91
SME1	YOR159C	OST1	P41543	476 aa	Known RBP	3.15	□□□□□ -1.91
SME1	YOR159C	TFG2	P41896	400 aa	Predicted RBP	3.15	□□□□□ -1.91
SME1	YOR159C	IRC6	P43615	237 aa		3.15	□□□□□ -1.91
SME1	YOR159C	TOF1	P53840	1238 aa		3.15	□□□□□ -1.91
SME1	YOR159C	MRPL19	P53875	158 aa		3.15	□□□□□ -1.91
SME1	YOR159C	SUB1	P54000	292 aa	Known RBP	3.15	□□□□□ -1.91
SME1	YOR159C	HSP31	Q04432	237 aa		3.15	□□□□□ -1.91
SME1	YOR159C	TSR2	Q06672	205 aa	Known RBP	3.15	□□□□□ -1.91
SME1	YOR159C	BSC6	Q08280	497 aa		3.15	□□□□□ -1.91
SME1	YOR159C	PKH2	Q12236	1081 aa	Known RBP	3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms