RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSC1	YOR142W	PHO87	P25360	923 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	SSH4	P32343	579 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	CAT2	P32796	670 aa	Known RBP	6.26	□□□□□ -1.41
LSC1	YOR142W	PTR2	P32901	601 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	MBP1	P39678	833 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	MRX1	P40050	688 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	YIL001W	P40560	513 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	SEC26	P41810	973 aa	Known RBP	6.26	□□□□□ -1.41
LSC1	YOR142W	TIM54	P47045	478 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	ATF2	P53296	535 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	SUB1	P54000	292 aa	Known RBP	6.26	□□□□□ -1.41
LSC1	YOR142W	OAZ1	Q02803	292 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	VPS16	Q03308	798 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	DFG5	Q05031	458 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	YHC1	Q05900	231 aa	Known RBP	6.26	□□□□□ -1.41
LSC1	YOR142W	VPS74	Q06385	345 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	DIA2	Q08496	732 aa	Predicted RBP	6.26	□□□□□ -1.41
LSC1	YOR142W	GET4	Q12125	312 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	NTO1	Q12311	748 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	NSI1	Q12457	570 aa		6.26	□□□□□ -1.41
LSC1	YOR142W	STE7	P06784	515 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	HOM3	P10869	527 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	MRP13	P12686	339 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	CDC26	P14724	124 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	MSS116	P15424	664 aa	Known RBP	6.25	□□□□□ -1.41
LSC1	YOR142W	STP22	P25604	385 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	ARE1	P25628	610 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	PHO91	P27514	894 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	NUD1	P32336	851 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	SEF1	P34228	1148 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	AUR1	P36107	401 aa	Predicted RBP	6.25	□□□□□ -1.41
LSC1	YOR142W	STP2	P38704	541 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	VPS41	P38959	992 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	AIM2	P39721	246 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	UTP25	P40498	721 aa	Known RBP	6.25	□□□□□ -1.41
LSC1	YOR142W	BAP3	P41815	604 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	MTR3	P48240	250 aa	Predicted RBP	6.25	□□□□□ -1.41
LSC1	YOR142W	LCL3	P53153	274 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	YML119W	Q03208	357 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	ISR1	Q06098	443 aa	Known RBP	6.25	□□□□□ -1.41
LSC1	YOR142W	PUN1	Q06991	263 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	SNF8	Q12483	233 aa		6.25	□□□□□ -1.41
LSC1	YOR142W	ATP4	P05626	244 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	RAP1	P11938	827 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	UNG1	P12887	359 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	DAP2	P18962	818 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	YJU2	P28320	278 aa	Predicted RBP	6.24	□□□□□ -1.41
LSC1	YOR142W	SSO1	P32867	290 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	DOA1	P36037	715 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	SPC42	P36094	363 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	GLG1	P36143	616 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	MRPL17	P36528	281 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
LSC1	YOR142W	FRT2	P39734	528 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	ICE2	P40499	491 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	MPS3	P47069	682 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	CDH1	P53197	566 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	UBP2	Q01476	1272 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	YPL071C	Q02864	156 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	EFR3	Q03653	782 aa	Known RBP	6.24	□□□□□ -1.41
LSC1	YOR142W	YMR010W	Q03687	405 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	REH1	Q06709	432 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	NBA1	Q08229	501 aa	Known RBP	6.24	□□□□□ -1.41
LSC1	YOR142W	YOL131W	Q08270	108 aa		6.24	□□□□□ -1.41
LSC1	YOR142W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
LSC1	YOR142W	PRP8	P33334	2413 aa	Known RBP	6.24	□□□□□ -1.41
LSC1	YOR142W	YPT1	P01123	206 aa	Known RBP	6.23	□□□□□ -1.41
LSC1	YOR142W	CCA1	P21269	546 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	PMT2	P31382	759 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	HPM1	P40481	377 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	YJL043W	P47053	257 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	MAL11	P53048	616 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	USE1	P53146	245 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	ARC35	P53731	342 aa	Known RBP	6.23	□□□□□ -1.41
LSC1	YOR142W	RHO4	Q00246	291 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	SNP1	Q00916	300 aa	Predicted RBP	6.23	□□□□□ -1.41
LSC1	YOR142W	GAD1	Q04792	585 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	MDM30	Q05930	598 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	YPR174C	Q06616	221 aa	Predicted RBP	6.23	□□□□□ -1.41
LSC1	YOR142W	MLH3	Q12083	715 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	RRP36	Q12481	300 aa	Predicted RBP	6.23	□□□□□ -1.41
LSC1	YOR142W	YOR019W	Q99248	730 aa		6.23	□□□□□ -1.41
LSC1	YOR142W	PRP4	P20053	465 aa	Known RBP	6.22	□□□□□ -1.41
LSC1	YOR142W	APN1	P22936	367 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	CPR3	P25719	182 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	ORC2	P32833	620 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	LST4	P34239	828 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	TSC10	P38342	320 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	GIP2	P40036	548 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	GAB1	P41733	394 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	RAX1	Q08760	435 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	YPR202W	Q08993	238 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	AKR2	Q12013	749 aa		6.22	□□□□□ -1.41
LSC1	YOR142W	TY1A-DR4	O74302	440 aa		6.21	□□□□□ -1.42
LSC1	YOR142W	ATP6	P00854	259 aa		6.21	□□□□□ -1.42
LSC1	YOR142W	ARG3	P05150	338 aa		6.21	□□□□□ -1.42
LSC1	YOR142W	TY1A-H	P0C2I4	478 aa	Known RBP	6.21	□□□□□ -1.42
LSC1	YOR142W	TY1A-A	P0CX57	440 aa		6.21	□□□□□ -1.42
LSC1	YOR142W	TY1A-PR1	P0CX58	440 aa		6.21	□□□□□ -1.42
LSC1	YOR142W	TY1A-OR	P0CX59	440 aa		6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms