RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W FUN30P31380 1131 aa4.43□□□□□ -1.7
RCL1YOL010W HIR2P32480 875 aa4.43□□□□□ -1.7
RCL1YOL010W UBC6P33296 250 aaPredicted RBP4.43□□□□□ -1.7
RCL1YOL010W MAL32P38158 584 aa4.43□□□□□ -1.7
RCL1YOL010W MRP21P38175 177 aa4.43□□□□□ -1.7
RCL1YOL010W TPA1P40032 644 aaKnown RBP4.43□□□□□ -1.7
RCL1YOL010W NDC80P40460 691 aa4.43□□□□□ -1.7
RCL1YOL010W DPH1P40487 425 aaKnown RBP4.43□□□□□ -1.7
RCL1YOL010W TAH11P47112 604 aa4.43□□□□□ -1.7
RCL1YOL010W HOC1P47124 396 aa4.43□□□□□ -1.7
RCL1YOL010W YGR250CP53316 781 aaKnown RBP4.43□□□□□ -1.7
RCL1YOL010W SNZ1Q03148 297 aa4.43□□□□□ -1.7
RCL1YOL010W TRS31Q03337 283 aa4.43□□□□□ -1.7
RCL1YOL010W RNH1Q04740 348 aa4.43□□□□□ -1.7
RCL1YOL010W SML1Q04964 104 aa4.43□□□□□ -1.7
RCL1YOL010W YLR352WQ06479 807 aa4.43□□□□□ -1.7
RCL1YOL010W YDL211CQ12121 372 aa4.43□□□□□ -1.7
RCL1YOL010W YGR161W-CQ3E744 92 aa4.43□□□□□ -1.7
RCL1YOL010W AMD1P15274 810 aaKnown RBP4.42□□□□□ -1.7
RCL1YOL010W MET8P15807 274 aa4.42□□□□□ -1.7
RCL1YOL010W PRP16P15938 1071 aaPredicted RBP4.42□□□□□ -1.7
RCL1YOL010W GLK1P17709 500 aaKnown RBP4.42□□□□□ -1.7
RCL1YOL010W MAK32P23060 363 aa4.42□□□□□ -1.7
RCL1YOL010W MRPL25P23369 157 aa4.42□□□□□ -1.7
RCL1YOL010W MEF1P25039 761 aa4.42□□□□□ -1.7
RCL1YOL010W AAD3P25612 363 aa4.42□□□□□ -1.7
RCL1YOL010W MGT1P26188 188 aa4.42□□□□□ -1.7
RCL1YOL010W SMI1P32566 505 aa4.42□□□□□ -1.7
RCL1YOL010W MSG5P38590 489 aa4.42□□□□□ -1.7
RCL1YOL010W YER034WP40022 185 aaKnown RBP4.42□□□□□ -1.7
RCL1YOL010W ARB1P40024 610 aaKnown RBP4.42□□□□□ -1.7
RCL1YOL010W VMA13P41807 478 aaKnown RBP4.42□□□□□ -1.7
RCL1YOL010W BPL1P48445 690 aaPredicted RBP4.42□□□□□ -1.7
RCL1YOL010W YGR016WP53209 190 aa4.42□□□□□ -1.7
RCL1YOL010W IMO32P53219 342 aa4.42□□□□□ -1.7
RCL1YOL010W PEX8P53248 589 aa4.42□□□□□ -1.7
RCL1YOL010W MKC7P53379 596 aa4.42□□□□□ -1.7
RCL1YOL010W PRP38Q00723 242 aaPredicted RBP4.42□□□□□ -1.7
RCL1YOL010W UTP6Q02354 440 aaKnown RBP4.42□□□□□ -1.7
RCL1YOL010W YPL068CQ02749 293 aa4.42□□□□□ -1.7
RCL1YOL010W PET117Q02771 107 aa4.42□□□□□ -1.7
RCL1YOL010W YMR111CQ04461 462 aaPredicted RBP4.42□□□□□ -1.7
RCL1YOL010W ATG38Q05789 226 aaKnown RBP4.42□□□□□ -1.7
RCL1YOL010W YOL159CQ08300 171 aa4.42□□□□□ -1.7
RCL1YOL010W YDR056CQ12025 205 aa4.42□□□□□ -1.7
RCL1YOL010W IMA3P0CW40 589 aa4.41□□□□□ -1.7
RCL1YOL010W IMA4P0CW41 589 aa4.41□□□□□ -1.7
RCL1YOL010W SPO16P17122 198 aa4.41□□□□□ -1.7
RCL1YOL010W PET123P17558 318 aa4.41□□□□□ -1.7
RCL1YOL010W CLB1P24868 471 aa4.41□□□□□ -1.7
RCL1YOL010W SED4P25365 1065 aa4.41□□□□□ -1.7
RCL1YOL010W MRE11P32829 692 aa4.41□□□□□ -1.7
RCL1YOL010W YPT52P36018 234 aaKnown RBP4.41□□□□□ -1.7
RCL1YOL010W PBP2P38151 413 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
RCL1YOL010W EXO84P38261 753 aa4.41□□□□□ -1.7
RCL1YOL010W YSW1P38280 609 aa4.41□□□□□ -1.7
RCL1YOL010W YHR127WP38833 243 aaKnown RBP4.41□□□□□ -1.7
RCL1YOL010W CCT4P39078 528 aaKnown RBP4.41□□□□□ -1.7
RCL1YOL010W SEO1P39709 593 aa4.41□□□□□ -1.7
RCL1YOL010W RAD17P48581 401 aa4.41□□□□□ -1.7
RCL1YOL010W ATP22P50273 684 aaPredicted RBP4.41□□□□□ -1.7
RCL1YOL010W BOP3P53958 396 aa4.41□□□□□ -1.7
RCL1YOL010W COG6P53959 839 aa4.41□□□□□ -1.7
RCL1YOL010W RPL22BP56628 122 aaKnown RBP4.41□□□□□ -1.7
RCL1YOL010W TFB2Q02939 513 aa4.41□□□□□ -1.7
RCL1YOL010W YML119WQ03208 357 aa4.41□□□□□ -1.7
RCL1YOL010W NHX1Q04121 633 aa4.41□□□□□ -1.7
RCL1YOL010W TDA9Q04545 1251 aa4.41□□□□□ -1.7
RCL1YOL010W ORM2Q06144 216 aa4.41□□□□□ -1.7
RCL1YOL010W DBP9Q06218 594 aaKnown RBP4.41□□□□□ -1.7
RCL1YOL010W SWA2Q06677 668 aa4.41□□□□□ -1.7
RCL1YOL010W IMA2Q08295 589 aa4.41□□□□□ -1.7
RCL1YOL010W YPR022CQ12139 1133 aa4.41□□□□□ -1.7
RCL1YOL010W NCE102Q12207 173 aaRIP-Chip data4.41□□□□□ -1.7not detected
RCL1YOL010W PHO5P00635 467 aa4.4□□□□□ -1.71
RCL1YOL010W NSP1P14907 823 aaKnown RBP4.4□□□□□ -1.71
RCL1YOL010W ATP12P22135 325 aa4.4□□□□□ -1.71
RCL1YOL010W URA10P30402 227 aa4.4□□□□□ -1.71
RCL1YOL010W TIP20P33891 701 aa4.4□□□□□ -1.71
RCL1YOL010W MTR2P34232 184 aaKnown RBP4.4□□□□□ -1.71
RCL1YOL010W YKL100CP34248 587 aa4.4□□□□□ -1.71
RCL1YOL010W RRP1P35178 278 aaPredicted RBP4.4□□□□□ -1.71
RCL1YOL010W OLA1P38219 394 aaKnown RBP4.4□□□□□ -1.71
RCL1YOL010W TDP1P38319 544 aa4.4□□□□□ -1.71
RCL1YOL010W YLF2P38746 405 aa4.4□□□□□ -1.71
RCL1YOL010W SWD1P39706 426 aa4.4□□□□□ -1.71
RCL1YOL010W SPF1P39986 1215 aaKnown RBP4.4□□□□□ -1.71
RCL1YOL010W ATG21Q02887 496 aa4.4□□□□□ -1.71
RCL1YOL010W RAD33Q04231 177 aa4.4□□□□□ -1.71
RCL1YOL010W ROY1Q04847 553 aa4.4□□□□□ -1.71
RCL1YOL010W TEF1P02994 458 aaKnown RBP4.39□□□□□ -1.71
RCL1YOL010W CMD1P06787 147 aaKnown RBP4.39□□□□□ -1.71
RCL1YOL010W YML002WP0CF17 737 aa4.39□□□□□ -1.71
RCL1YOL010W RSR1P13856 272 aa4.39□□□□□ -1.71
RCL1YOL010W CLN2P20438 545 aa4.39□□□□□ -1.71
RCL1YOL010W ARG1P22768 420 aa4.39□□□□□ -1.71
RCL1YOL010W ADE1P27616 306 aa4.39□□□□□ -1.71
RCL1YOL010W URA7P28274 579 aaKnown RBP4.39□□□□□ -1.71
RCL1YOL010W MF(ALPHA)2P32435 120 aa4.39□□□□□ -1.71
RCL1YOL010W CDC12P32468 407 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms