RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C RHO2P06781 192 aa2.98□□□□□ -1.93
SSN8YNL025C RAD3P06839 778 aa2.98□□□□□ -1.93
SSN8YNL025C RPL31BP0C2H9 113 aaKnown RBP2.98□□□□□ -1.93
SSN8YNL025C ALG1P16661 449 aa2.98□□□□□ -1.93
SSN8YNL025C SEC62P21825 274 aa2.98□□□□□ -1.93
SSN8YNL025C DPB2P24482 689 aaPredicted RBP2.98□□□□□ -1.93
SSN8YNL025C HXT1P32465 570 aa2.98□□□□□ -1.93
SSN8YNL025C SOF1P33750 489 aaKnown RBP2.98□□□□□ -1.93
SSN8YNL025C PAD1P33751 242 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SSN8YNL025C ADE17P38009 592 aaKnown RBP2.98□□□□□ -1.93
SSN8YNL025C EFM2P38347 419 aa2.98□□□□□ -1.93
SSN8YNL025C SEC72P39742 193 aaKnown RBP2.98□□□□□ -1.93
SSN8YNL025C RPN11P43588 306 aaKnown RBP2.98□□□□□ -1.93
SSN8YNL025C MRX5P47007 382 aa2.98□□□□□ -1.93
SSN8YNL025C DPB11P47027 764 aaPredicted RBP2.98□□□□□ -1.93
SSN8YNL025C RFX1P48743 811 aa2.98□□□□□ -1.93
SSN8YNL025C RIB4P50861 169 aaPredicted RBP2.98□□□□□ -1.93
SSN8YNL025C YGL185CP53100 379 aa2.98□□□□□ -1.93
SSN8YNL025C SSU72P53538 206 aaPredicted RBP2.98□□□□□ -1.93
SSN8YNL025C DBP6P53734 629 aaKnown RBP2.98□□□□□ -1.93
SSN8YNL025C RPM2Q02773 1202 aa2.98□□□□□ -1.93
SSN8YNL025C URH1Q04179 340 aa2.98□□□□□ -1.93
SSN8YNL025C IVY1Q04934 453 aa2.98□□□□□ -1.93
SSN8YNL025C SPC2Q04969 178 aa2.98□□□□□ -1.93
SSN8YNL025C VPS74Q06385 345 aa2.98□□□□□ -1.93
SSN8YNL025C ARR3Q06598 404 aa2.98□□□□□ -1.93
SSN8YNL025C MRPL35Q06678 367 aa2.98□□□□□ -1.93
SSN8YNL025C YDL144CQ07589 356 aa2.98□□□□□ -1.93
SSN8YNL025C DIS3Q08162 1001 aaKnown RBP2.98□□□□□ -1.93
SSN8YNL025C SIL1Q08199 421 aa2.98□□□□□ -1.93
SSN8YNL025C GPN2Q08726 347 aaPredicted RBP2.98□□□□□ -1.93
SSN8YNL025C SLF1Q12034 447 aaKnown RBP2.98□□□□□ -1.93
SSN8YNL025C SRO7Q12038 1033 aa2.98□□□□□ -1.93
SSN8YNL025C USV1Q12132 391 aa2.98□□□□□ -1.93
SSN8YNL025C LSP1Q12230 341 aaKnown RBP2.98□□□□□ -1.93
SSN8YNL025C VAM3Q12241 283 aa2.98□□□□□ -1.93
SSN8YNL025C RRD2Q12461 358 aa2.98□□□□□ -1.93
SSN8YNL025C NCB2Q92317 146 aa2.98□□□□□ -1.93
SSN8YNL025C PGK1P00560 416 aaKnown RBP2.97□□□□□ -1.93
SSN8YNL025C RAD7P06779 565 aa2.97□□□□□ -1.93
SSN8YNL025C PUT2P07275 575 aa2.97□□□□□ -1.93
SSN8YNL025C MAS1P10507 462 aa2.97□□□□□ -1.93
SSN8YNL025C CKA2P19454 339 aa2.97□□□□□ -1.93
SSN8YNL025C ZRC1P20107 442 aa2.97□□□□□ -1.93
SSN8YNL025C KGD1P20967 1014 aaKnown RBP2.97□□□□□ -1.93
SSN8YNL025C CMK2P22517 447 aa2.97□□□□□ -1.93
SSN8YNL025C YSR3P23501 404 aa2.97□□□□□ -1.93
SSN8YNL025C YCP4P25349 247 aaKnown RBP2.97□□□□□ -1.93
SSN8YNL025C PUP3P25451 205 aaKnown RBP2.97□□□□□ -1.93
SSN8YNL025C PBN1P25580 416 aa2.97□□□□□ -1.93
SSN8YNL025C IMG1P25626 169 aa2.97□□□□□ -1.93
SSN8YNL025C DEP1P31385 405 aa2.97□□□□□ -1.93
SSN8YNL025C ECT1P33412 323 aa2.97□□□□□ -1.93
SSN8YNL025C TIF3P34167 436 aaKnown RBP2.97□□□□□ -1.93
SSN8YNL025C LHS1P36016 881 aa2.97□□□□□ -1.93
SSN8YNL025C MRPL7P36519 292 aa2.97□□□□□ -1.93
SSN8YNL025C AAP1P37898 856 aaKnown RBP2.97□□□□□ -1.93
SSN8YNL025C MAK5P38112 773 aaPredicted RBP2.97□□□□□ -1.93
SSN8YNL025C EHT1P38295 451 aa2.97□□□□□ -1.93
SSN8YNL025C VHC1P38329 1120 aa2.97□□□□□ -1.93
SSN8YNL025C ERG7P38604 731 aa2.97□□□□□ -1.93
SSN8YNL025C SPC97P38863 823 aa2.97□□□□□ -1.93
SSN8YNL025C YNL195CP40168 261 aa2.97□□□□□ -1.93
SSN8YNL025C CDC40P40968 455 aaPredicted RBP2.97□□□□□ -1.93
SSN8YNL025C AIM22P47051 409 aa2.97□□□□□ -1.93
SSN8YNL025C MPS3P47069 682 aa2.97□□□□□ -1.93
SSN8YNL025C RPS7BP48164 190 aaKnown RBP2.97□□□□□ -1.93
SSN8YNL025C RMR1P53060 241 aa2.97□□□□□ -1.93
SSN8YNL025C YGR067CP53243 804 aa2.97□□□□□ -1.93
SSN8YNL025C SPC98P53540 846 aa2.97□□□□□ -1.93
SSN8YNL025C CUS2P53830 285 aaPredicted RBP2.97□□□□□ -1.93
SSN8YNL025C YMR209CQ03648 457 aa2.97□□□□□ -1.93
SSN8YNL025C USA1Q03714 838 aa2.97□□□□□ -1.93
SSN8YNL025C RTT103Q05543 409 aa2.97□□□□□ -1.93
SSN8YNL025C STE23Q06010 1027 aa2.97□□□□□ -1.93
SSN8YNL025C RGC1Q06108 1083 aaKnown RBP2.97□□□□□ -1.93
SSN8YNL025C YFT2Q06676 274 aa2.97□□□□□ -1.93
SSN8YNL025C POS5Q06892 414 aa2.97□□□□□ -1.93
SSN8YNL025C RTT109Q07794 436 aa2.97□□□□□ -1.93
SSN8YNL025C NSE1Q07913 336 aa2.97□□□□□ -1.93
SSN8YNL025C PAM18Q07914 168 aa2.97□□□□□ -1.93
SSN8YNL025C BSC6Q08280 497 aa2.97□□□□□ -1.93
SSN8YNL025C YDR262WQ12331 272 aa2.97□□□□□ -1.93
SSN8YNL025C ATG31Q12421 196 aa2.97□□□□□ -1.93
SSN8YNL025C AI5_BETAQ9ZZX0 354 aa2.97□□□□□ -1.93
SSN8YNL025C CFT1Q06632 1357 aaKnown RBP2.97□□□□□ -1.93
SSN8YNL025C TDH2P00358 332 aaKnown RBP2.96□□□□□ -1.94
SSN8YNL025C TDH3P00359 332 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
SSN8YNL025C MRP13P12686 339 aa2.96□□□□□ -1.94
SSN8YNL025C PRP16P15938 1071 aaPredicted RBP2.96□□□□□ -1.94
SSN8YNL025C TUP1P16649 713 aa2.96□□□□□ -1.94
SSN8YNL025C UTR1P21373 530 aa2.96□□□□□ -1.94
SSN8YNL025C HXT2P23585 541 aa2.96□□□□□ -1.94
SSN8YNL025C DAL2P25335 343 aa2.96□□□□□ -1.94
SSN8YNL025C YUR1P26725 428 aa2.96□□□□□ -1.94
SSN8YNL025C RFA2P26754 273 aaKnown RBP2.96□□□□□ -1.94
SSN8YNL025C YIM1P28625 365 aa2.96□□□□□ -1.94
SSN8YNL025C YPS1P32329 569 aa2.96□□□□□ -1.94
SSN8YNL025C SIP1P32578 815 aa2.96□□□□□ -1.94
SSN8YNL025C RAD23P32628 398 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms