RNA–Protein interactions for RNA: YMR030W

RSF1, Transcript of Protein required for respiratory growth, yeast

Gene RSF1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSF1	YMR030W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
RSF1	YMR030W	YGL138C	P53122	345 aa		4.26	□□□□□ -1.73
RSF1	YMR030W	RTT102	P53330	157 aa		4.26	□□□□□ -1.73
RSF1	YMR030W	YNL146W	P53906	100 aa		4.26	□□□□□ -1.73
RSF1	YMR030W	SLG1	P54867	378 aa		4.26	□□□□□ -1.73
RSF1	YMR030W	NGL3	Q03210	505 aa		4.26	□□□□□ -1.73
RSF1	YMR030W	CWC21	Q03375	135 aa	Known RBP	4.26	□□□□□ -1.73
RSF1	YMR030W	GYL1	Q04322	720 aa		4.26	□□□□□ -1.73
RSF1	YMR030W	TLG2	Q08144	397 aa		4.26	□□□□□ -1.73
RSF1	YMR030W	IES4	Q08561	116 aa		4.26	□□□□□ -1.73
RSF1	YMR030W	YPT6	Q99260	215 aa		4.26	□□□□□ -1.73
RSF1	YMR030W	FKS1	P38631	1876 aa	Known RBP	4.26	□□□□□ -1.73
RSF1	YMR030W	PEP4	P07267	405 aa	Known RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	RPL20A	P0CX23	172 aa	Known RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	RPL20B	P0CX24	172 aa	Predicted RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	TCP1	P12612	559 aa	Known RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	ATR1	P13090	542 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	ATS1	P31386	333 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	COT1	P32798	439 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	TIF3	P34167	436 aa	Known RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	SEF1	P34228	1148 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	MTC4	P38335	694 aa	Known RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	YPT35	P38815	214 aa	Known RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	LCL3	P53153	274 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	DRN1	P53255	507 aa	Known RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	RET3	P53600	189 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	BOR1	P53838	576 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	PGA2	P53903	129 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	NCS2	P53923	493 aa	Predicted RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	TOF2	Q02208	771 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	ADA2	Q02336	434 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	MRPL51	Q06090	140 aa	Predicted RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	VPS74	Q06385	345 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	YLH47	Q06493	454 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	AYT1	Q12226	474 aa		4.25	□□□□□ -1.73
RSF1	YMR030W	LSP1	Q12230	341 aa	Known RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	HSH49	Q99181	213 aa	Predicted RBP	4.25	□□□□□ -1.73
RSF1	YMR030W	SUC2	P00724	532 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	RAD52	P06778	471 aa	Known RBP	4.24	□□□□□ -1.73
RSF1	YMR030W	MRP13	P12686	339 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	EXO70	P19658	623 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	PRR1	P28708	518 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	AGA1	P32323	725 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	CSE1	P33307	960 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	BMH2	P34730	273 aa	Known RBP	4.24	□□□□□ -1.73
RSF1	YMR030W	VTC2	P43585	828 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	RLI1	Q03195	608 aa	Known RBP	4.24	□□□□□ -1.73
RSF1	YMR030W	FIN1	Q03898	291 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	IVY1	Q04934	453 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	ECM7	Q06200	448 aa		4.24	□□□□□ -1.73
RSF1	YMR030W	SPE3	Q12074	293 aa	Known RBP	4.24	□□□□□ -1.73
RSF1	YMR030W	THR4	P16120	514 aa	Known RBP	4.23	□□□□□ -1.73
RSF1	YMR030W	VPS3	P23643	1011 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	PMU1	P36069	295 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	CHS6	P40955	746 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	IDP2	P41939	412 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	EPL1	P43572	832 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	YGR066C	P53242	292 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	IPI3	P53877	555 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	THP1	Q08231	455 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	RSA1	Q08932	381 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	RCN2	Q12044	265 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	SMC6	Q12749	1114 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	YJR112W-A	Q3E743	109 aa		4.23	□□□□□ -1.73
RSF1	YMR030W	GAL80	P04387	435 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	EST1	P17214	699 aa	Predicted RBP	4.22	□□□□□ -1.73
RSF1	YMR030W	PAP1	P29468	568 aa	Known RBP	4.22	□□□□□ -1.73
RSF1	YMR030W	GPI10	P30777	616 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	FRE1	P32791	686 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	TCD2	P36101	447 aa	Known RBP	4.22	□□□□□ -1.73
RSF1	YMR030W	AVT5	P38176	459 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	SHO1	P40073	367 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	ALG8	P40351	577 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	FYV8	P46949	817 aa	Known RBP	4.22	□□□□□ -1.73
RSF1	YMR030W	IRC15	Q02733	499 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	SHS1	Q07657	551 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	YLL056C	Q12177	298 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	CEX1	Q12453	761 aa		4.22	□□□□□ -1.73
RSF1	YMR030W	BRR1	Q99177	341 aa	Predicted RBP	4.22	□□□□□ -1.73
RSF1	YMR030W	RPL4A	P10664	362 aa	Known RBP	4.21	□□□□□ -1.74
RSF1	YMR030W	FRS2	P15625	503 aa	Known RBP	4.21	□□□□□ -1.74
RSF1	YMR030W	RPC53	P25441	422 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	TUL1	P36096	758 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	TCM62	P38228	572 aa	Known RBP	4.21	□□□□□ -1.74
RSF1	YMR030W	MMS4	P38257	691 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	OPY1	P38271	328 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	MSR1	P38714	643 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	PCF11	P39081	626 aa	Predicted RBP	4.21	□□□□□ -1.74
RSF1	YMR030W	BTT1	P40314	149 aa	Predicted RBP	4.21	□□□□□ -1.74
RSF1	YMR030W	RPL4B	P49626	362 aa	Known RBP	4.21	□□□□□ -1.74
RSF1	YMR030W	IMD4	P50094	524 aa	Known RBP	4.21	□□□□□ -1.74
RSF1	YMR030W	CAF130	P53280	1122 aa	Predicted RBP	4.21	□□□□□ -1.74
RSF1	YMR030W	RBG2	P53295	368 aa	Known RBP	4.21	□□□□□ -1.74
RSF1	YMR030W	ARP5	P53946	755 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	YPQ1	Q12010	308 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	YDR056C	Q12025	205 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	HRT3	Q12347	344 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	YLR422W	Q06409	1932 aa		4.21	□□□□□ -1.74
RSF1	YMR030W	HEM2	P05373	342 aa		4.2	□□□□□ -1.74
RSF1	YMR030W	HSC82	P15108	705 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 308.7 ms