RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W SVL3Q03088 825 aaKnown RBP9.49□□□□□ -0.89
SHH4YLR164W WTM1Q12363 437 aaKnown RBP9.49□□□□□ -0.89
SHH4YLR164W TIM9O74700 87 aa9.48□□□□□ -0.89
SHH4YLR164W ARP2P32381 391 aaKnown RBP9.48□□□□□ -0.89
SHH4YLR164W SUI1P32911 108 aaKnown RBP9.48□□□□□ -0.89
SHH4YLR164W YBR241CP38142 488 aa9.48□□□□□ -0.89
SHH4YLR164W VHR1P40522 640 aa9.48□□□□□ -0.89
SHH4YLR164W TED1P40533 473 aa9.48□□□□□ -0.89
SHH4YLR164W CFD1P40558 293 aa9.48□□□□□ -0.89
SHH4YLR164W ESF2P53743 316 aaKnown RBP9.48□□□□□ -0.89
SHH4YLR164W IGO1P53897 168 aa9.48□□□□□ -0.89
SHH4YLR164W YNL095CP53932 642 aa9.48□□□□□ -0.89
SHH4YLR164W UGO1Q03327 502 aa9.48□□□□□ -0.89
SHH4YLR164W PEX12Q04370 399 aa9.48□□□□□ -0.89
SHH4YLR164W PSY3Q12318 242 aa9.48□□□□□ -0.89
SHH4YLR164W PFK27Q12471 397 aaPredicted RBP9.48□□□□□ -0.89
SHH4YLR164W TOR2P32600 2474 aaKnown RBP9.48□□□□□ -0.89
SHH4YLR164W HTA1P04911 132 aaKnown RBP9.47□□□□□ -0.89
SHH4YLR164W SUI3P09064 285 aaKnown RBP9.47□□□□□ -0.89
SHH4YLR164W SNF4P12904 322 aa9.47□□□□□ -0.89
SHH4YLR164W PRP2P20095 876 aaPredicted RBP9.47□□□□□ -0.89
SHH4YLR164W VPS33P20795 691 aa9.47□□□□□ -0.89
SHH4YLR164W PTP1P25044 335 aa9.47□□□□□ -0.89
SHH4YLR164W CWP1P28319 239 aa9.47□□□□□ -0.89
SHH4YLR164W NTG1P31378 399 aa9.47□□□□□ -0.89
SHH4YLR164W NUP2P32499 720 aa9.47□□□□□ -0.89
SHH4YLR164W PEP12P32854 288 aa9.47□□□□□ -0.89
SHH4YLR164W LHP1P33399 275 aaKnown RBP9.47□□□□□ -0.89
SHH4YLR164W SWH1P35845 1188 aa9.47□□□□□ -0.89
SHH4YLR164W MNL1P38888 796 aa9.47□□□□□ -0.89
SHH4YLR164W MNN9P39107 395 aaKnown RBP9.47□□□□□ -0.89
SHH4YLR164W RSP5P39940 809 aaKnown RBP9.47□□□□□ -0.89
SHH4YLR164W RIC1P40395 1056 aa9.47□□□□□ -0.89
SHH4YLR164W YIL001WP40560 513 aa9.47□□□□□ -0.89
SHH4YLR164W RPL10P41805 221 aaKnown RBP9.47□□□□□ -0.89
SHH4YLR164W RIM21P48565 533 aa9.47□□□□□ -0.89
SHH4YLR164W ATP22P50273 684 aaPredicted RBP9.47□□□□□ -0.89
SHH4YLR164W CDH1P53197 566 aa9.47□□□□□ -0.89
SHH4YLR164W APC4Q04601 652 aa9.47□□□□□ -0.89
SHH4YLR164W GAD1Q04792 585 aa9.47□□□□□ -0.89
SHH4YLR164W SSQ1Q05931 657 aaPredicted RBP9.47□□□□□ -0.89
SHH4YLR164W BOP2Q06150 570 aa9.47□□□□□ -0.89
SHH4YLR164W TEN1Q07921 160 aa9.47□□□□□ -0.89
SHH4YLR164W YLR036CQ07986 203 aa9.47□□□□□ -0.89
SHH4YLR164W POL2P21951 2222 aaKnown RBP9.46□□□□□ -0.89
SHH4YLR164W GAL3P13045 520 aa9.46□□□□□ -0.9
SHH4YLR164W HOP1P20050 605 aa9.46□□□□□ -0.9
SHH4YLR164W CHA1P25379 360 aaKnown RBP9.46□□□□□ -0.9
SHH4YLR164W CTS1P29029 562 aa9.46□□□□□ -0.9
SHH4YLR164W RIB1P38066 345 aa9.46□□□□□ -0.9
SHH4YLR164W YKU80Q04437 629 aa9.46□□□□□ -0.9
SHH4YLR164W RQC1Q05468 723 aaKnown RBP9.46□□□□□ -0.9
SHH4YLR164W PUS9Q12069 462 aa9.46□□□□□ -0.9
SHH4YLR164W LAG2Q92325 660 aa9.46□□□□□ -0.9
SHH4YLR164W URA4P20051 364 aa9.45□□□□□ -0.9
SHH4YLR164W YCL049CP25577 312 aa9.45□□□□□ -0.9
SHH4YLR164W BUD14P27637 709 aa9.45□□□□□ -0.9
SHH4YLR164W NTH1P32356 751 aa9.45□□□□□ -0.9
SHH4YLR164W YHR177WP38867 453 aa9.45□□□□□ -0.9
SHH4YLR164W RBG1P39729 369 aa9.45□□□□□ -0.9
SHH4YLR164W FAU1P40099 211 aa9.45□□□□□ -0.9
SHH4YLR164W MPM1P40364 252 aa9.45□□□□□ -0.9
SHH4YLR164W AGP3P43548 558 aa9.45□□□□□ -0.9
SHH4YLR164W YNR068CP53754 272 aa9.45□□□□□ -0.9
SHH4YLR164W BNA5Q05979 453 aa9.45□□□□□ -0.9
SHH4YLR164W OPT2Q06593 877 aa9.45□□□□□ -0.9
SHH4YLR164W YDL129WQ07555 291 aa9.45□□□□□ -0.9
SHH4YLR164W COS7Q07788 383 aa9.45□□□□□ -0.9
SHH4YLR164W THP1Q08231 455 aa9.45□□□□□ -0.9
SHH4YLR164W MHF2Q3E829 80 aa9.45□□□□□ -0.9
SHH4YLR164W STE7P06784 515 aa9.44□□□□□ -0.9
SHH4YLR164W COR1P07256 457 aa9.44□□□□□ -0.9
SHH4YLR164W MSB1P21339 1137 aaKnown RBP9.44□□□□□ -0.9
SHH4YLR164W NPR1P22211 790 aa9.44□□□□□ -0.9
SHH4YLR164W SLY41P22215 453 aa9.44□□□□□ -0.9
SHH4YLR164W MGR1P25573 417 aa9.44□□□□□ -0.9
SHH4YLR164W YIM1P28625 365 aa9.44□□□□□ -0.9
SHH4YLR164W CDC3P32457 520 aaKnown RBP9.44□□□□□ -0.9
SHH4YLR164W SCO2P38072 301 aa9.44□□□□□ -0.9
SHH4YLR164W TSL1P38427 1098 aaKnown RBP9.44□□□□□ -0.9
SHH4YLR164W YHR112CP38716 378 aa9.44□□□□□ -0.9
SHH4YLR164W ELP2P42935 788 aa9.44□□□□□ -0.9
SHH4YLR164W YFL066CP43538 392 aa9.44□□□□□ -0.9
SHH4YLR164W DSL1P53847 754 aa9.44□□□□□ -0.9
SHH4YLR164W RHO4Q00246 291 aa9.44□□□□□ -0.9
SHH4YLR164W REC102Q02721 264 aa9.44□□□□□ -0.9
SHH4YLR164W SWA2Q06677 668 aa9.44□□□□□ -0.9
SHH4YLR164W IRC13Q08630 104 aa9.44□□□□□ -0.9
SHH4YLR164W STE6P12866 1290 aa9.43□□□□□ -0.9
SHH4YLR164W MER1P16523 270 aa9.43□□□□□ -0.9
SHH4YLR164W DMC1P25453 334 aa9.43□□□□□ -0.9
SHH4YLR164W GSH1P32477 678 aa9.43□□□□□ -0.9
SHH4YLR164W MKK1P32490 508 aa9.43□□□□□ -0.9
SHH4YLR164W OMA1P36163 345 aa9.43□□□□□ -0.9
SHH4YLR164W LYS12P40495 371 aaKnown RBP9.43□□□□□ -0.9
SHH4YLR164W SNL1P40548 159 aa9.43□□□□□ -0.9
SHH4YLR164W FET5P43561 622 aa9.43□□□□□ -0.9
SHH4YLR164W BNA3P47039 444 aaKnown RBP9.43□□□□□ -0.9
SHH4YLR164W IBA57P47158 497 aa9.43□□□□□ -0.9
SHH4YLR164W YGR079WP53249 370 aa9.43□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms