RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W DOA4P32571 926 aa2.41□□□□□ -2.02
SDC25YLL016W BZZ1P38822 633 aa2.41□□□□□ -2.02
SDC25YLL016W MBB1P39534 108 aa2.41□□□□□ -2.02
SDC25YLL016W FMP52P40008 231 aa2.41□□□□□ -2.02
SDC25YLL016W YMR147WP40218 223 aaKnown RBP2.41□□□□□ -2.02
SDC25YLL016W ATG27P46989 271 aa2.41□□□□□ -2.02
SDC25YLL016W AIM22P47051 409 aa2.41□□□□□ -2.02
SDC25YLL016W MRPL22P53881 309 aa2.41□□□□□ -2.02
SDC25YLL016W BCP1Q06338 283 aa2.41□□□□□ -2.02
SDC25YLL016W ARR1Q06596 294 aa2.41□□□□□ -2.02
SDC25YLL016W MDM36Q06820 579 aa2.41□□□□□ -2.02
SDC25YLL016W YOR389WQ08912 624 aa2.41□□□□□ -2.02
SDC25YLL016W ULA1Q12059 462 aa2.41□□□□□ -2.02
SDC25YLL016W YOR012WQ12351 137 aa2.41□□□□□ -2.02
SDC25YLL016W NDJ1Q12366 352 aa2.41□□□□□ -2.02
SDC25YLL016W TRP4P07285 380 aaPredicted RBP2.4□□□□□ -2.02
SDC25YLL016W RNR2P09938 399 aaKnown RBP2.4□□□□□ -2.02
SDC25YLL016W UGA1P17649 471 aa2.4□□□□□ -2.02
SDC25YLL016W ELO2P25358 347 aa2.4□□□□□ -2.02
SDC25YLL016W SPS22P25380 463 aa2.4□□□□□ -2.02
SDC25YLL016W MSN4P33749 630 aa2.4□□□□□ -2.02
SDC25YLL016W YKL070WP36087 169 aa2.4□□□□□ -2.02
SDC25YLL016W CBP4P37267 147 aa2.4□□□□□ -2.02
SDC25YLL016W CBR1P38626 284 aaKnown RBP2.4□□□□□ -2.02
SDC25YLL016W SNL1P40548 159 aa2.4□□□□□ -2.02
SDC25YLL016W POP1P41812 875 aa2.4□□□□□ -2.02
SDC25YLL016W YGL185CP53100 379 aa2.4□□□□□ -2.02
SDC25YLL016W VOA1P53262 265 aa2.4□□□□□ -2.02
SDC25YLL016W YNL092WP53934 400 aa2.4□□□□□ -2.02
SDC25YLL016W IRC4Q03036 179 aa2.4□□□□□ -2.02
SDC25YLL016W CAB5Q03941 241 aa2.4□□□□□ -2.02
SDC25YLL016W RRN11Q04712 507 aa2.4□□□□□ -2.02
SDC25YLL016W TMA10Q06177 86 aa2.4□□□□□ -2.02
SDC25YLL016W THI3Q07471 609 aa2.4□□□□□ -2.02
SDC25YLL016W THP1Q08231 455 aa2.4□□□□□ -2.02
SDC25YLL016W PEX27Q08580 376 aa2.4□□□□□ -2.02
SDC25YLL016W PLP2Q12017 286 aa2.4□□□□□ -2.02
SDC25YLL016W RRD2Q12461 358 aa2.4□□□□□ -2.02
SDC25YLL016W SWI1P09547 1314 aa2.4□□□□□ -2.02
SDC25YLL016W YPR089WO13585 888 aa2.4□□□□□ -2.03
SDC25YLL016W GPH1P06738 902 aaKnown RBP2.4□□□□□ -2.03
SDC25YLL016W PRP6P19735 899 aaPredicted RBP2.4□□□□□ -2.03
SDC25YLL016W MRPL25P23369 157 aa2.4□□□□□ -2.03
SDC25YLL016W PRO3P32263 286 aaKnown RBP2.4□□□□□ -2.03
SDC25YLL016W OLA1P38219 394 aaKnown RBP2.4□□□□□ -2.03
SDC25YLL016W YMR262WP38430 313 aa2.4□□□□□ -2.03
SDC25YLL016W IAH1P41734 238 aa2.4□□□□□ -2.03
SDC25YLL016W BRO1P48582 844 aa2.4□□□□□ -2.03
SDC25YLL016W ERG5P54781 538 aa2.4□□□□□ -2.03
SDC25YLL016W ORC3P54790 616 aa2.4□□□□□ -2.03
SDC25YLL016W ENB1Q08299 606 aa2.4□□□□□ -2.03
SDC25YLL016W TRM13Q12383 476 aa2.4□□□□□ -2.03
SDC25YLL016W CDC21P06785 304 aa2.39□□□□□ -2.03
SDC25YLL016W SSA3P09435 649 aaKnown RBP2.39□□□□□ -2.03
SDC25YLL016W REC114P32841 428 aa2.39□□□□□ -2.03
SDC25YLL016W PAD1P33751 242 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SDC25YLL016W YPT10P38146 199 aa2.39□□□□□ -2.03
SDC25YLL016W SPC97P38863 823 aa2.39□□□□□ -2.03
SDC25YLL016W YLR455WQ06188 304 aa2.39□□□□□ -2.03
SDC25YLL016W TSR1Q07381 788 aaKnown RBP2.39□□□□□ -2.03
SDC25YLL016W LEA1Q08963 238 aaPredicted RBP2.39□□□□□ -2.03
SDC25YLL016W MED4Q12343 284 aa2.39□□□□□ -2.03
SDC25YLL016W APC2Q12440 853 aa2.39□□□□□ -2.03
SDC25YLL016W ADF1Q2V2Q1 113 aa2.39□□□□□ -2.03
SDC25YLL016W SIR3P06701 978 aa2.39□□□□□ -2.03
SDC25YLL016W MRP2P10663 115 aaPredicted RBP2.39□□□□□ -2.03
SDC25YLL016W RNA1P11745 407 aaKnown RBP2.39□□□□□ -2.03
SDC25YLL016W RSR1P13856 272 aa2.39□□□□□ -2.03
SDC25YLL016W STE4P18851 423 aa2.39□□□□□ -2.03
SDC25YLL016W ADY2P25613 283 aa2.39□□□□□ -2.03
SDC25YLL016W PTC6P25646 442 aa2.39□□□□□ -2.03
SDC25YLL016W SPR1P32603 445 aa2.39□□□□□ -2.03
SDC25YLL016W NRP1P32770 719 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SDC25YLL016W RRN10P38204 145 aa2.39□□□□□ -2.03
SDC25YLL016W YFH7P43591 353 aa2.39□□□□□ -2.03
SDC25YLL016W GTO1P48239 356 aa2.39□□□□□ -2.03
SDC25YLL016W SEG1Q04279 960 aa2.39□□□□□ -2.03
SDC25YLL016W YLR173WQ06247 608 aa2.39□□□□□ -2.03
SDC25YLL016W IPK1Q06667 281 aa2.39□□□□□ -2.03
SDC25YLL016W RTT109Q07794 436 aa2.39□□□□□ -2.03
SDC25YLL016W YLL007CQ07799 665 aa2.39□□□□□ -2.03
SDC25YLL016W SFG1Q12507 346 aa2.39□□□□□ -2.03
SDC25YLL016W ZPS1Q12512 249 aa2.39□□□□□ -2.03
SDC25YLL016W FAB1P34756 2278 aa2.39□□□□□ -2.03
SDC25YLL016W RPS13P05756 151 aaKnown RBP2.39□□□□□ -2.03
SDC25YLL016W GPA1P08539 472 aa2.39□□□□□ -2.03
SDC25YLL016W NFT1P0CE68 1218 aa2.39□□□□□ -2.03
SDC25YLL016W MAS1P10507 462 aa2.39□□□□□ -2.03
SDC25YLL016W WHI2P12611 486 aa2.39□□□□□ -2.03
SDC25YLL016W SAR1P20606 190 aaKnown RBP2.39□□□□□ -2.03
SDC25YLL016W YJU2P28320 278 aaPredicted RBP2.39□□□□□ -2.03
SDC25YLL016W SUA5P32579 426 aa2.39□□□□□ -2.03
SDC25YLL016W CBF5P33322 483 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SDC25YLL016W YBR139WP38109 508 aa2.39□□□□□ -2.03
SDC25YLL016W ALP1P38971 573 aa2.39□□□□□ -2.03
SDC25YLL016W YER034WP40022 185 aaKnown RBP2.39□□□□□ -2.03
SDC25YLL016W SNG1P46950 547 aa2.39□□□□□ -2.03
SDC25YLL016W GCD14P46959 383 aaPredicted RBP2.39□□□□□ -2.03
SDC25YLL016W TOM22P49334 152 aa2.39□□□□□ -2.03
SDC25YLL016W YNL134CP53912 376 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms