RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W RPI1P23250 407 aaKnown RBP2.33□□□□□ -2.04
RPF1YHR088W OCA4P25366 362 aa2.33□□□□□ -2.04
RPF1YHR088W MCM10P32354 571 aa2.33□□□□□ -2.04
RPF1YHR088W RML2P32611 393 aa2.33□□□□□ -2.04
RPF1YHR088W CMC1P36064 111 aa2.33□□□□□ -2.04
RPF1YHR088W RTC2P38279 296 aa2.33□□□□□ -2.04
RPF1YHR088W JLP2P40206 208 aa2.33□□□□□ -2.04
RPF1YHR088W FLC3P53121 802 aa2.33□□□□□ -2.04
RPF1YHR088W CMS1Q07897 291 aaKnown RBP2.33□□□□□ -2.04
RPF1YHR088W SKI7Q08491 747 aaPredicted RBP2.33□□□□□ -2.04
RPF1YHR088W YPS3Q12303 508 aa2.33□□□□□ -2.04
RPF1YHR088W YRM1Q12340 786 aa2.33□□□□□ -2.04
RPF1YHR088W GCN4P03069 281 aa2.32□□□□□ -2.04
RPF1YHR088W ESL1P40456 1118 aa2.32□□□□□ -2.04
RPF1YHR088W VPS75P53853 264 aa2.32□□□□□ -2.04
RPF1YHR088W BET5Q03630 159 aa2.32□□□□□ -2.04
RPF1YHR088W DNL4Q08387 944 aaPredicted RBP2.32□□□□□ -2.04
RPF1YHR088W ORT1Q12375 292 aa2.32□□□□□ -2.04
RPF1YHR088W CCH1P50077 2039 aa2.31□□□□□ -2.04
RPF1YHR088W TRX2P22803 104 aaKnown RBP2.31□□□□□ -2.04
RPF1YHR088W IDH2P28241 369 aaKnown RBP2.31□□□□□ -2.04
RPF1YHR088W YFR057WP43625 151 aa2.31□□□□□ -2.04
RPF1YHR088W AZR1P50080 613 aa2.31□□□□□ -2.04
RPF1YHR088W YIF1P53845 314 aaKnown RBP2.31□□□□□ -2.04
RPF1YHR088W BCH1Q05029 724 aa2.31□□□□□ -2.04
RPF1YHR088W ATG29Q12092 213 aa2.31□□□□□ -2.04
RPF1YHR088W RMD5Q12508 421 aa2.31□□□□□ -2.04
RPF1YHR088W YLR278CQ05854 1341 aa2.31□□□□□ -2.04
RPF1YHR088W HXT14P42833 540 aa2.3□□□□□ -2.04
RPF1YHR088W YJR011CP47086 261 aaPredicted RBP2.3□□□□□ -2.04
RPF1YHR088W HMS2P47175 358 aa2.3□□□□□ -2.04
RPF1YHR088W CRH1P53301 507 aa2.3□□□□□ -2.04
RPF1YHR088W PRM7Q12459 698 aa2.3□□□□□ -2.04
RPF1YHR088W ENT1Q12518 454 aa2.3□□□□□ -2.04
RPF1YHR088W COX4P04037 155 aa2.29□□□□□ -2.04
RPF1YHR088W MSI1P13712 422 aa2.29□□□□□ -2.04
RPF1YHR088W DPH2P32461 534 aa2.29□□□□□ -2.04
RPF1YHR088W HIR2P32480 875 aa2.29□□□□□ -2.04
RPF1YHR088W IES6P32617 166 aa2.29□□□□□ -2.04
RPF1YHR088W YER186CP40101 306 aa2.29□□□□□ -2.04
RPF1YHR088W YIL029CP40538 142 aa2.29□□□□□ -2.04
RPF1YHR088W DOT5P40553 215 aa2.29□□□□□ -2.04
RPF1YHR088W SAS2P40963 338 aa2.29□□□□□ -2.04
RPF1YHR088W VMA13P41807 478 aaKnown RBP2.29□□□□□ -2.04
RPF1YHR088W SFH5P47008 294 aa2.29□□□□□ -2.04
RPF1YHR088W MRPS16Q02608 121 aa2.29□□□□□ -2.04
RPF1YHR088W LIP2Q06005 328 aa2.29□□□□□ -2.04
RPF1YHR088W RIP1P08067 215 aa2.28□□□□□ -2.04
RPF1YHR088W SPO7P18410 259 aa2.28□□□□□ -2.04
RPF1YHR088W RRP1P35178 278 aaPredicted RBP2.28□□□□□ -2.04
RPF1YHR088W OM14P38325 134 aa2.28□□□□□ -2.04
RPF1YHR088W VHC1P38329 1120 aa2.28□□□□□ -2.04
RPF1YHR088W UPF3P48412 387 aaKnown RBP2.28□□□□□ -2.04
RPF1YHR088W NUP116Q02630 1113 aa2.28□□□□□ -2.04
RPF1YHR088W SYF1Q04048 859 aaPredicted RBP2.28□□□□□ -2.04
RPF1YHR088W RQC1Q05468 723 aaKnown RBP2.28□□□□□ -2.04
RPF1YHR088W RIF2Q06208 395 aa2.28□□□□□ -2.04
RPF1YHR088W YML133CQ03099 1374 aa2.27□□□□□ -2.05
RPF1YHR088W YLL067CQ07888 1374 aa2.27□□□□□ -2.05
RPF1YHR088W YLL066CQ99208 1374 aa2.27□□□□□ -2.05
RPF1YHR088W CTR86P25355 563 aa2.27□□□□□ -2.05
RPF1YHR088W OXA1P39952 402 aa2.27□□□□□ -2.05
RPF1YHR088W DLD2P46681 530 aaKnown RBP2.27□□□□□ -2.05
RPF1YHR088W BIR1P47134 954 aa2.27□□□□□ -2.05
RPF1YHR088W YPS5P53057 165 aa2.27□□□□□ -2.05
RPF1YHR088W RTS3P53289 263 aa2.27□□□□□ -2.05
RPF1YHR088W TPS1Q00764 495 aaKnown RBP2.27□□□□□ -2.05
RPF1YHR088W HSP42Q12329 375 aa2.27□□□□□ -2.05
RPF1YHR088W SEC63P14906 663 aa2.26□□□□□ -2.05
RPF1YHR088W FMT1P32785 401 aa2.26□□□□□ -2.05
RPF1YHR088W PMT1P33775 817 aa2.26□□□□□ -2.05
RPF1YHR088W DTR1P38125 572 aa2.26□□□□□ -2.05
RPF1YHR088W GPI18P38211 433 aa2.26□□□□□ -2.05
RPF1YHR088W YEL057CP39983 233 aa2.26□□□□□ -2.05
RPF1YHR088W YPL107WQ02873 248 aa2.26□□□□□ -2.05
RPF1YHR088W SMF3Q12078 473 aaPredicted RBP2.26□□□□□ -2.05
RPF1YHR088W YGK3Q12222 375 aaPredicted RBP2.26□□□□□ -2.05
RPF1YHR088W AHC1Q12433 566 aa2.26□□□□□ -2.05
RPF1YHR088W AAC3P18238 307 aa2.25□□□□□ -2.05
RPF1YHR088W CLN1P20437 546 aa2.25□□□□□ -2.05
RPF1YHR088W CDC50P25656 391 aa2.25□□□□□ -2.05
RPF1YHR088W RFC3P38629 340 aa2.25□□□□□ -2.05
RPF1YHR088W COX14P39103 70 aa2.25□□□□□ -2.05
RPF1YHR088W ALD5P40047 520 aaKnown RBP2.25□□□□□ -2.05
RPF1YHR088W KTR6P54070 446 aa2.25□□□□□ -2.05
RPF1YHR088W TAF12Q03761 539 aa2.25□□□□□ -2.05
RPF1YHR088W YET2Q04210 160 aa2.25□□□□□ -2.05
RPF1YHR088W TPT1Q12272 230 aaKnown RBP2.25□□□□□ -2.05
RPF1YHR088W RAX2Q12465 1220 aa2.25□□□□□ -2.05
RPF1YHR088W RAD57P25301 460 aa2.24□□□□□ -2.05
RPF1YHR088W SMY1P32364 656 aaKnown RBP2.24□□□□□ -2.05
RPF1YHR088W SEC9P40357 651 aa2.24□□□□□ -2.05
RPF1YHR088W MST27P53176 234 aa2.24□□□□□ -2.05
RPF1YHR088W RTN1Q04947 295 aaKnown RBP2.24□□□□□ -2.05
RPF1YHR088W RAX1Q08760 435 aa2.24□□□□□ -2.05
RPF1YHR088W YDR056CQ12025 205 aa2.24□□□□□ -2.05
RPF1YHR088W RFM1Q12192 310 aa2.24□□□□□ -2.05
RPF1YHR088W ADH1P00330 348 aaKnown RBP2.23□□□□□ -2.05
RPF1YHR088W SIN4P32259 974 aa2.23□□□□□ -2.05
RPF1YHR088W OTU2P38747 307 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms