RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W FMS1P50264 508 aa2.48□□□□□ -2.01
SSF1YHR066W BTN2P53286 410 aa2.48□□□□□ -2.01
SSF1YHR066W YNR048WP53740 393 aa2.48□□□□□ -2.01
SSF1YHR066W ORT1Q12375 292 aa2.48□□□□□ -2.01
SSF1YHR066W IRC20Q06554 1556 aa2.47□□□□□ -2.01
SSF1YHR066W CLN3P13365 580 aa2.47□□□□□ -2.01
SSF1YHR066W CLC1P17891 233 aa2.47□□□□□ -2.01
SSF1YHR066W SLY1P22213 666 aa2.47□□□□□ -2.01
SSF1YHR066W SPS22P25380 463 aa2.47□□□□□ -2.01
SSF1YHR066W KRE2P27809 442 aa2.47□□□□□ -2.01
SSF1YHR066W YEL045CP32616 141 aa2.47□□□□□ -2.01
SSF1YHR066W YME2P32843 850 aa2.47□□□□□ -2.01
SSF1YHR066W SDH3P33421 198 aa2.47□□□□□ -2.01
SSF1YHR066W ARA1P38115 344 aa2.47□□□□□ -2.01
SSF1YHR066W LYS1P38998 373 aaRIP-Chip data2.47□□□□□ -2.01not detected
SSF1YHR066W PRE5P40302 234 aaKnown RBP2.47□□□□□ -2.01
SSF1YHR066W WWM1P43582 211 aaKnown RBP2.47□□□□□ -2.01
SSF1YHR066W NCA3P46955 337 aa2.47□□□□□ -2.01
SSF1YHR066W COS5P47187 383 aa2.47□□□□□ -2.01
SSF1YHR066W SHE10P53075 577 aa2.47□□□□□ -2.01
SSF1YHR066W SPC19Q03954 165 aa2.47□□□□□ -2.01
SSF1YHR066W HEL2Q05580 639 aaKnown RBP2.47□□□□□ -2.01
SSF1YHR066W COS7Q07788 383 aa2.47□□□□□ -2.01
SSF1YHR066W RKM1Q08961 583 aaPredicted RBP2.47□□□□□ -2.01
SSF1YHR066W RRG1Q12167 365 aaPredicted RBP2.47□□□□□ -2.01
SSF1YHR066W VAM3Q12241 283 aa2.47□□□□□ -2.01
SSF1YHR066W SFI1Q12369 946 aa2.47□□□□□ -2.01
SSF1YHR066W RMD5Q12508 421 aa2.47□□□□□ -2.01
SSF1YHR066W DNF1P32660 1571 aa2.46□□□□□ -2.02
SSF1YHR066W ADH2P00331 348 aaKnown RBP2.46□□□□□ -2.02
SSF1YHR066W TEF1P02994 458 aaKnown RBP2.46□□□□□ -2.02
SSF1YHR066W RPS8AP0CX39 200 aaKnown RBP2.46□□□□□ -2.02
SSF1YHR066W RPS8BP0CX40 200 aaKnown RBP2.46□□□□□ -2.02
SSF1YHR066W ISY1P21374 235 aaPredicted RBP2.46□□□□□ -2.02
SSF1YHR066W CTR86P25355 563 aa2.46□□□□□ -2.02
SSF1YHR066W RHB1P25378 209 aa2.46□□□□□ -2.02
SSF1YHR066W CDC60P26637 1090 aaKnown RBP2.46□□□□□ -2.02
SSF1YHR066W ARO2P28777 376 aaKnown RBP2.46□□□□□ -2.02
SSF1YHR066W BEM1P29366 551 aa2.46□□□□□ -2.02
SSF1YHR066W HIR2P32480 875 aa2.46□□□□□ -2.02
SSF1YHR066W MRPL4P36517 319 aa2.46□□□□□ -2.02
SSF1YHR066W PIM1P36775 1133 aa2.46□□□□□ -2.02
SSF1YHR066W PTH1P38876 190 aaKnown RBP2.46□□□□□ -2.02
SSF1YHR066W HMS2P47175 358 aa2.46□□□□□ -2.02
SSF1YHR066W PPM1Q04081 328 aa2.46□□□□□ -2.02
SSF1YHR066W RRP45Q05636 305 aaKnown RBP2.46□□□□□ -2.02
SSF1YHR066W RRG7Q08774 242 aaPredicted RBP2.46□□□□□ -2.02
SSF1YHR066W HRT3Q12347 344 aa2.46□□□□□ -2.02
SSF1YHR066W YRF1-4O13559 1382 aa2.45□□□□□ -2.02
SSF1YHR066W ARG4P04076 463 aaPredicted RBP2.45□□□□□ -2.02
SSF1YHR066W FUR1P18562 216 aaKnown RBP2.45□□□□□ -2.02
SSF1YHR066W LSB5P25369 354 aa2.45□□□□□ -2.02
SSF1YHR066W YCR051WP25631 222 aa2.45□□□□□ -2.02
SSF1YHR066W TOA1P32773 286 aa2.45□□□□□ -2.02
SSF1YHR066W SOR1P35497 357 aaKnown RBP2.45□□□□□ -2.02
SSF1YHR066W BYE1P36106 594 aa2.45□□□□□ -2.02
SSF1YHR066W MTC6P38849 526 aa2.45□□□□□ -2.02
SSF1YHR066W YGL138CP53122 345 aa2.45□□□□□ -2.02
SSF1YHR066W MTM1P53320 366 aa2.45□□□□□ -2.02
SSF1YHR066W BNI5P53890 448 aaKnown RBP2.45□□□□□ -2.02
SSF1YHR066W YMR181CQ03231 154 aa2.45□□□□□ -2.02
SSF1YHR066W ADD37Q03233 198 aa2.45□□□□□ -2.02
SSF1YHR066W ROY1Q04847 553 aa2.45□□□□□ -2.02
SSF1YHR066W SOR2Q07786 357 aa2.45□□□□□ -2.02
SSF1YHR066W SNX3Q08826 162 aaKnown RBP2.45□□□□□ -2.02
SSF1YHR066W CDC25P04821 1589 aa2.45□□□□□ -2.02
SSF1YHR066W TRP1P00912 224 aa2.44□□□□□ -2.02
SSF1YHR066W HOM3P10869 527 aa2.44□□□□□ -2.02
SSF1YHR066W APE3P37302 537 aaKnown RBP2.44□□□□□ -2.02
SSF1YHR066W NTC20P38302 140 aaPredicted RBP2.44□□□□□ -2.02
SSF1YHR066W MSG5P38590 489 aa2.44□□□□□ -2.02
SSF1YHR066W PAN6P40459 309 aa2.44□□□□□ -2.02
SSF1YHR066W RSC1P53236 928 aa2.44□□□□□ -2.02
SSF1YHR066W HRI1Q05905 244 aaKnown RBP2.44□□□□□ -2.02
SSF1YHR066W TMC1Q08422 150 aaPredicted RBP2.44□□□□□ -2.02
SSF1YHR066W SGT1Q08446 395 aa2.44□□□□□ -2.02
SSF1YHR066W SKI7Q08491 747 aaPredicted RBP2.44□□□□□ -2.02
SSF1YHR066W HSP42Q12329 375 aa2.44□□□□□ -2.02
SSF1YHR066W LTE1P07866 1435 aa2.43□□□□□ -2.02
SSF1YHR066W SCEIP03882 235 aa2.43□□□□□ -2.02
SSF1YHR066W SUP35P05453 685 aaKnown RBP2.43□□□□□ -2.02
SSF1YHR066W CYC3P06182 269 aa2.43□□□□□ -2.02
SSF1YHR066W NFT1P0CE68 1218 aa2.43□□□□□ -2.02
SSF1YHR066W SPO12P17123 173 aa2.43□□□□□ -2.02
SSF1YHR066W PET123P17558 318 aa2.43□□□□□ -2.02
SSF1YHR066W OPI1P21957 404 aa2.43□□□□□ -2.02
SSF1YHR066W RAD57P25301 460 aa2.43□□□□□ -2.02
SSF1YHR066W ADK2P26364 225 aa2.43□□□□□ -2.02
SSF1YHR066W SMY1P32364 656 aaKnown RBP2.43□□□□□ -2.02
SSF1YHR066W SWI3P32591 825 aa2.43□□□□□ -2.02
SSF1YHR066W KKQ8P36004 724 aa2.43□□□□□ -2.02
SSF1YHR066W YAL037WP39728 267 aa2.43□□□□□ -2.02
SSF1YHR066W PHO86P46956 311 aa2.43□□□□□ -2.02
SSF1YHR066W PHB2P50085 310 aa2.43□□□□□ -2.02
SSF1YHR066W GPI15P53961 229 aa2.43□□□□□ -2.02
SSF1YHR066W SKO1Q02100 647 aa2.43□□□□□ -2.02
SSF1YHR066W KAP120Q02932 1032 aa2.43□□□□□ -2.02
SSF1YHR066W HER2Q03557 464 aa2.43□□□□□ -2.02
SSF1YHR066W YDR131CQ03899 556 aa2.43□□□□□ -2.02
SSF1YHR066W SXM1Q04175 944 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms