RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	YLL056C	Q12177	298 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	TAD3	Q9URQ3	322 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	YER145C-A	A0A023PYF4	145 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	YPR089W	O13585	888 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	COX3	P00420	269 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	RAD52	P06778	471 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	SSA3	P09435	649 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	RPI1	P23250	407 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	SMY1	P32364	656 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	ATP11	P32453	318 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	APE2	P32454	952 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	YSC83	P32792	385 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	KKQ8	P36004	724 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	CCT2	P39076	527 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	YER079W	P40052	210 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	ATM1	P40416	690 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	AIM20	P40451	204 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	SYG1	P40528	902 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	SNL1	P40548	159 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	YPS6	P40583	537 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	SPG5	P42933	373 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	GTO1	P48239	356 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	MRK1	P50873	501 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	PNC1	P53184	216 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	YIF1	P53845	314 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	ASI1	P54074	624 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	CAB5	Q03941	241 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	CSI1	Q04368	295 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	ERV41	Q04651	352 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	ARR1	Q06596	294 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
VMA22	YHR060W	LSP1	Q12230	341 aa	Known RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	FRE7	Q12333	620 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	MED4	Q12343	284 aa		4.15	□□□□□ -1.75
VMA22	YHR060W	DCP1	Q12517	231 aa	Predicted RBP	4.15	□□□□□ -1.75
VMA22	YHR060W	RPL24A	P04449	155 aa	Known RBP	4.14	□□□□□ -1.75
VMA22	YHR060W	DST1	P07273	309 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	HXT2	P23585	541 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	SLM5	P25345	492 aa	Known RBP	4.14	□□□□□ -1.75
VMA22	YHR060W	COT1	P32798	439 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	YBR139W	P38109	508 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	YMR262W	P38430	313 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	PHO90	P39535	881 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	IAH1	P41734	238 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	MND1	P53102	219 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	LSB1	P53281	241 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	GPI1	P53306	609 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	SOL4	P53315	255 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	RHO4	Q00246	291 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	CTL1	Q03220	320 aa	Known RBP	4.14	□□□□□ -1.75
VMA22	YHR060W	SHS1	Q07657	551 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	RMD5	Q12508	421 aa		4.14	□□□□□ -1.75
VMA22	YHR060W	MES1	P00958	751 aa	Known RBP	4.13	□□□□□ -1.75
VMA22	YHR060W	AQY1	P0CD91	305 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	EXO70	P19658	623 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	HNM1	P19807	563 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	YKL070W	P36087	169 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	ERG7	P38604	731 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	ARP1	P38696	384 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	RRP4	P38792	359 aa	Known RBP	4.13	□□□□□ -1.75
VMA22	YHR060W	CTM1	P38818	585 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	KEL1	P38853	1164 aa	Known RBP	4.13	□□□□□ -1.75
VMA22	YHR060W	ALP1	P38971	573 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	ERV46	P39727	415 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	GCN20	P43535	752 aa	Known RBP	4.13	□□□□□ -1.75
VMA22	YHR060W	MMT1	Q03218	510 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	YDR387C	Q04162	555 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	BSP1	Q06604	576 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	MRPL35	Q06678	367 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	VAC14	Q06708	880 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	YOL075C	Q08234	1294 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	ATG34	Q12292	412 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	RGS2	Q99188	309 aa		4.13	□□□□□ -1.75
VMA22	YHR060W	SUC2	P00724	532 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	CHS1	P08004	1131 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	BAR1	P12630	587 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	ILV6	P25605	309 aa	Known RBP	4.12	□□□□□ -1.75
VMA22	YHR060W	MSK1	P32048	576 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	EFB1	P32471	206 aa	Known RBP	4.12	□□□□□ -1.75
VMA22	YHR060W	UTR4	P32626	227 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	RGT1	P32862	1170 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
VMA22	YHR060W	PTK1	P36002	662 aa	Predicted RBP	4.12	□□□□□ -1.75
VMA22	YHR060W	YNK1	P36010	153 aa	Known RBP	4.12	□□□□□ -1.75
VMA22	YHR060W	TCD1	P38756	429 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	YHR122W	P38829	231 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	RTT107	P38850	1070 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	YMR124W	P39523	943 aa	Known RBP	4.12	□□□□□ -1.75
VMA22	YHR060W	PRP39	P39682	629 aa	Known RBP	4.12	□□□□□ -1.75
VMA22	YHR060W	YAL037W	P39728	267 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	FAU1	P40099	211 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	VRG4	P40107	337 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	YIL060W	P40519	144 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	TRS85	P46944	698 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	IMD3	P50095	523 aa	Known RBP	4.12	□□□□□ -1.75
VMA22	YHR060W	BUD32	P53323	261 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	NUP53	Q03790	475 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	URH1	Q04179	340 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	RRN11	Q04712	507 aa		4.12	□□□□□ -1.75
VMA22	YHR060W	IVY1	Q04934	453 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms