RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C REX2P54964 269 aaKnown RBP12.43□□□□□ -0.42
SHU1YHL006C RNT1Q02555 471 aa12.43□□□□□ -0.42
SHU1YHL006C YMR210WQ03649 449 aa12.43□□□□□ -0.42
SHU1YHL006C ECM11Q04110 302 aa12.43□□□□□ -0.42
SHU1YHL006C HTA2P04912 132 aa12.42□□□□□ -0.42
SHU1YHL006C PTR2P32901 601 aa12.42□□□□□ -0.42
SHU1YHL006C MOH1P38191 138 aa12.42□□□□□ -0.42
SHU1YHL006C YBL029WP38201 376 aa12.42□□□□□ -0.42
SHU1YHL006C PSA1P41940 361 aaKnown RBP12.42□□□□□ -0.42
SHU1YHL006C MCH5Q08777 521 aa12.42□□□□□ -0.42
SHU1YHL006C RPN5Q12250 445 aaKnown RBP12.42□□□□□ -0.42
SHU1YHL006C AAR2P32357 355 aaPredicted RBP12.41□□□□□ -0.42
SHU1YHL006C SNO3P43544 222 aa12.41□□□□□ -0.42
SHU1YHL006C YJR115WP47152 169 aa12.41□□□□□ -0.42
SHU1YHL006C TAF6P53040 516 aa12.41□□□□□ -0.42
SHU1YHL006C CUS2P53830 285 aaPredicted RBP12.41□□□□□ -0.42
SHU1YHL006C PUS7Q08647 676 aaKnown RBP12.41□□□□□ -0.42
SHU1YHL006C YOR376WQ08900 122 aa12.41□□□□□ -0.42
SHU1YHL006C RRP36Q12481 300 aaPredicted RBP12.41□□□□□ -0.42
SHU1YHL006C YOR019WQ99248 730 aa12.41□□□□□ -0.42
SHU1YHL006C VNX1P42839 908 aa12.4□□□□□ -0.42
SHU1YHL006C UBP6P43593 499 aaKnown RBP12.4□□□□□ -0.42
SHU1YHL006C SPT20P50875 604 aa12.4□□□□□ -0.42
SHU1YHL006C MRM2P53123 320 aa12.4□□□□□ -0.42
SHU1YHL006C VPS16Q03308 798 aa12.4□□□□□ -0.42
SHU1YHL006C PUN1Q06991 263 aa12.4□□□□□ -0.42
SHU1YHL006C YPR096CO13587 100 aa12.39□□□□□ -0.43
SHU1YHL006C OM14P38325 134 aa12.39□□□□□ -0.43
SHU1YHL006C GIP2P40036 548 aa12.39□□□□□ -0.43
SHU1YHL006C SRP1Q02821 542 aaKnown RBP12.39□□□□□ -0.43
SHU1YHL006C YPL071CQ02864 156 aa12.39□□□□□ -0.43
SHU1YHL006C VPS74Q06385 345 aa12.39□□□□□ -0.43
SHU1YHL006C UAF30Q08747 228 aa12.39□□□□□ -0.43
SHU1YHL006C JLP1Q12358 412 aa12.39□□□□□ -0.43
SHU1YHL006C HAA1Q12753 694 aaKnown RBP12.39□□□□□ -0.43
SHU1YHL006C RPC19P28000 142 aaKnown RBP12.38□□□□□ -0.43
SHU1YHL006C CAT2P32796 670 aaKnown RBP12.38□□□□□ -0.43
SHU1YHL006C HSM3P38348 480 aa12.38□□□□□ -0.43
SHU1YHL006C GID8P40208 455 aa12.38□□□□□ -0.43
SHU1YHL006C TDA10P42938 290 aa12.38□□□□□ -0.43
SHU1YHL006C YGR067CP53243 804 aa12.38□□□□□ -0.43
SHU1YHL006C YDR209CQ03480 137 aa12.38□□□□□ -0.43
SHU1YHL006C FAR10Q06001 478 aa12.38□□□□□ -0.43
SHU1YHL006C YPR109WQ06104 294 aa12.38□□□□□ -0.43
SHU1YHL006C GLT1Q12680 2145 aaKnown RBP12.37□□□□□ -0.43
SHU1YHL006C CAR1P00812 333 aaKnown RBP12.37□□□□□ -0.43
SHU1YHL006C SSO1P32867 290 aa12.37□□□□□ -0.43
SHU1YHL006C FRE2P36033 711 aa12.37□□□□□ -0.43
SHU1YHL006C YBR062CP38239 180 aa12.37□□□□□ -0.43
SHU1YHL006C AIM2P39721 246 aa12.37□□□□□ -0.43
SHU1YHL006C CDH1P53197 566 aa12.37□□□□□ -0.43
SHU1YHL006C YPS7Q06325 596 aa12.37□□□□□ -0.43
SHU1YHL006C REX3Q12090 404 aa12.37□□□□□ -0.43
SHU1YHL006C YOR342CQ12182 319 aa12.37□□□□□ -0.43
SHU1YHL006C RAS2P01120 322 aaKnown RBP12.36□□□□□ -0.43
SHU1YHL006C CBS2P14905 389 aa12.36□□□□□ -0.43
SHU1YHL006C NPP1P25353 742 aa12.36□□□□□ -0.43
SHU1YHL006C SEC17P32602 292 aa12.36□□□□□ -0.43
SHU1YHL006C AYR1P40471 297 aa12.36□□□□□ -0.43
SHU1YHL006C SEC26P41810 973 aaKnown RBP12.36□□□□□ -0.43
SHU1YHL006C RHO4Q00246 291 aa12.36□□□□□ -0.43
SHU1YHL006C CYK3Q07533 885 aa12.36□□□□□ -0.43
SHU1YHL006C YTM1Q12024 460 aaPredicted RBP12.36□□□□□ -0.43
SHU1YHL006C YKL018C-AQ3E7A7 99 aa12.36□□□□□ -0.43
SHU1YHL006C SAS5Q99314 248 aa12.36□□□□□ -0.43
SHU1YHL006C CBP2P03874 630 aaPredicted RBP12.35□□□□□ -0.43
SHU1YHL006C AI1P03875 834 aa12.35□□□□□ -0.43
SHU1YHL006C ATP4P05626 244 aa12.35□□□□□ -0.43
SHU1YHL006C RPT5P33297 434 aaKnown RBP12.35□□□□□ -0.43
SHU1YHL006C MSN2P33748 704 aa12.35□□□□□ -0.43
SHU1YHL006C ARN1P38731 627 aa12.35□□□□□ -0.43
SHU1YHL006C PMT4P46971 762 aa12.35□□□□□ -0.43
SHU1YHL006C GOR1P53839 350 aa12.35□□□□□ -0.43
SHU1YHL006C YEH1Q07804 573 aa12.35□□□□□ -0.43
SHU1YHL006C MCM7P38132 845 aa12.34□□□□□ -0.43
SHU1YHL006C TPA1P40032 644 aaKnown RBP12.34□□□□□ -0.43
SHU1YHL006C ALB1P47019 175 aaPredicted RBP12.34□□□□□ -0.43
SHU1YHL006C ATG21Q02887 496 aa12.34□□□□□ -0.43
SHU1YHL006C FDC1Q03034 503 aa12.34□□□□□ -0.43
SHU1YHL006C YDL218WQ07629 317 aa12.34□□□□□ -0.43
SHU1YHL006C SGT1Q08446 395 aa12.34□□□□□ -0.43
SHU1YHL006C YSF3P0C074 85 aaPredicted RBP12.33□□□□□ -0.44
SHU1YHL006C DAP2P18962 818 aa12.33□□□□□ -0.44
SHU1YHL006C GPI12P23797 304 aa12.33□□□□□ -0.44
SHU1YHL006C CTS1P29029 562 aa12.33□□□□□ -0.44
SHU1YHL006C STP2P38704 541 aa12.33□□□□□ -0.44
SHU1YHL006C YJR141WP47172 347 aaPredicted RBP12.33□□□□□ -0.44
SHU1YHL006C ATP22P50273 684 aaPredicted RBP12.33□□□□□ -0.44
SHU1YHL006C HOL1P53389 586 aa12.33□□□□□ -0.44
SHU1YHL006C YLR413WQ06689 675 aa12.33□□□□□ -0.44
SHU1YHL006C MDM32Q12171 622 aa12.33□□□□□ -0.44
SHU1YHL006C PAR32Q12515 295 aaKnown RBP12.33□□□□□ -0.44
SHU1YHL006C MRP13P12686 339 aa12.32□□□□□ -0.44
SHU1YHL006C GLG1P36143 616 aa12.32□□□□□ -0.44
SHU1YHL006C BET3P36149 193 aa12.32□□□□□ -0.44
SHU1YHL006C SEA4P38164 1038 aa12.32□□□□□ -0.44
SHU1YHL006C ALG3P38179 458 aa12.32□□□□□ -0.44
SHU1YHL006C IFA38P38286 347 aa12.32□□□□□ -0.44
SHU1YHL006C TRR2P38816 342 aa12.32□□□□□ -0.44
SHU1YHL006C PZF1P39933 429 aa12.32□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms