RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	YPL071C	Q02864	156 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	PEX12	Q04370	399 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	GAD1	Q04792	585 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	STP3	Q05937	343 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	MFG1	Q07684	458 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	DIN7	Q12086	430 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	RTK1	Q12100	620 aa	Predicted RBP	5.2	□□□□□ -1.58
SHE10	YGL228W	YOR342C	Q12182	319 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	NSI1	Q12457	570 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	PFK27	Q12471	397 aa	Predicted RBP	5.2	□□□□□ -1.58
SHE10	YGL228W	TIM9	O74700	87 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	SUI3	P09064	285 aa	Known RBP	5.2	□□□□□ -1.58
SHE10	YGL228W	SNF4	P12904	322 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	CMK2	P22517	447 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	PRO1	P32264	428 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	ARP2	P32381	391 aa	Known RBP	5.2	□□□□□ -1.58
SHE10	YGL228W	NUP2	P32499	720 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	YBR241C	P38142	488 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	MNN9	P39107	395 aa	Known RBP	5.2	□□□□□ -1.58
SHE10	YGL228W	NEO1	P40527	1151 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	YIL001W	P40560	513 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	REH1	Q06709	432 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	YLR036C	Q07986	203 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	MMT2	Q08970	484 aa		5.2	□□□□□ -1.58
SHE10	YGL228W	WTM1	Q12363	437 aa	Known RBP	5.2	□□□□□ -1.58
SHE10	YGL228W	FAS1	P07149	2051 aa	Known RBP	5.19	□□□□□ -1.58
SHE10	YGL228W	CAN1	P04817	590 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	HTA1	P04911	132 aa	Known RBP	5.19	□□□□□ -1.58
SHE10	YGL228W	PTP1	P25044	335 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	BUD14	P27637	709 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	NTG1	P31378	399 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	PEP12	P32854	288 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	SUI1	P32911	108 aa	Known RBP	5.19	□□□□□ -1.58
SHE10	YGL228W	AIM2	P39721	246 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	RIC1	P40395	1056 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	QDR2	P40474	542 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	VHR1	P40522	640 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	PSA1	P41940	361 aa	Known RBP	5.19	□□□□□ -1.58
SHE10	YGL228W	ESF2	P53743	316 aa	Known RBP	5.19	□□□□□ -1.58
SHE10	YGL228W	APC4	Q04601	652 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	SSQ1	Q05931	657 aa	Predicted RBP	5.19	□□□□□ -1.58
SHE10	YGL228W	BOP2	Q06150	570 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	COS7	Q07788	383 aa		5.19	□□□□□ -1.58
SHE10	YGL228W	BRR2	P32639	2163 aa	Known RBP	5.19	□□□□□ -1.58
SHE10	YGL228W	GAL3	P13045	520 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	URA4	P20051	364 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	VPS33	P20795	691 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	CWP1	P28319	239 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	CDC3	P32457	520 aa	Known RBP	5.18	□□□□□ -1.58
SHE10	YGL228W	LHP1	P33399	275 aa	Known RBP	5.18	□□□□□ -1.58
SHE10	YGL228W	RIB1	P38066	345 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	MNL1	P38888	796 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	RSP5	P39940	809 aa	Known RBP	5.18	□□□□□ -1.58
SHE10	YGL228W	TED1	P40533	473 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	RPL10	P41805	221 aa	Known RBP	5.18	□□□□□ -1.58
SHE10	YGL228W	ELP2	P42935	788 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	ATP22	P50273	684 aa	Predicted RBP	5.18	□□□□□ -1.58
SHE10	YGL228W	YNR068C	P53754	272 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	DSL1	P53847	754 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	IGO1	P53897	168 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	YKU80	Q04437	629 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	TEN1	Q07921	160 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	THP1	Q08231	455 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	TAF3	Q12297	353 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	MHF2	Q3E829	80 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	LAG2	Q92325	660 aa		5.18	□□□□□ -1.58
SHE10	YGL228W	STE7	P06784	515 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	HOP1	P20050	605 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	PRP2	P20095	876 aa	Predicted RBP	5.17	□□□□□ -1.58
SHE10	YGL228W	MGR1	P25573	417 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	CTS1	P29029	562 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	TSL1	P38427	1098 aa	Known RBP	5.17	□□□□□ -1.58
SHE10	YGL228W	YHR112C	P38716	378 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	RBG1	P39729	369 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	FAU1	P40099	211 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	SNL1	P40548	159 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	CFD1	P40558	293 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	AGP3	P43548	558 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	RIM21	P48565	533 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	CDH1	P53197	566 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	RQC1	Q05468	723 aa	Known RBP	5.17	□□□□□ -1.58
SHE10	YGL228W	BNA5	Q05979	453 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	SWA2	Q06677	668 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	DTD1	Q07648	150 aa	Known RBP	5.17	□□□□□ -1.58
SHE10	YGL228W	PUS9	Q12069	462 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	SEN1	Q00416	2231 aa	Known RBP	5.17	□□□□□ -1.58
SHE10	YGL228W	COR1	P07256	457 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	RPP1B	P10622	106 aa	Known RBP	5.17	□□□□□ -1.58
SHE10	YGL228W	STE6	P12866	1290 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	MER1	P16523	270 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	NPR1	P22211	790 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	CHA1	P25379	360 aa	Known RBP	5.17	□□□□□ -1.58
SHE10	YGL228W	DMC1	P25453	334 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	YCL049C	P25577	312 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	TAH1	P25638	111 aa	Predicted RBP	5.17	□□□□□ -1.58
SHE10	YGL228W	UBC8	P28263	218 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	NTH1	P32356	751 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	MKK1	P32490	508 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	MDJ1	P35191	511 aa		5.17	□□□□□ -1.58
SHE10	YGL228W	SPC34	P36131	295 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms