RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W FES1P38260 290 aa3.96□□□□□ -1.78
UBP6YFR010W YJL193WP39542 402 aa3.96□□□□□ -1.78
UBP6YFR010W YEL020CP39994 560 aa3.96□□□□□ -1.78
UBP6YFR010W YMR147WP40218 223 aaKnown RBP3.96□□□□□ -1.78
UBP6YFR010W STB2P46679 850 aa3.96□□□□□ -1.78
UBP6YFR010W YAR1P46683 200 aa3.96□□□□□ -1.78
UBP6YFR010W FMP33P46998 180 aa3.96□□□□□ -1.78
UBP6YFR010W PRM15Q03262 622 aa3.96□□□□□ -1.78
UBP6YFR010W HMO1Q03973 246 aaKnown RBP3.96□□□□□ -1.78
UBP6YFR010W SPC24Q04477 213 aa3.96□□□□□ -1.78
UBP6YFR010W DCS1Q06151 350 aa3.96□□□□□ -1.78
UBP6YFR010W CDD1Q06549 142 aa3.96□□□□□ -1.78
UBP6YFR010W SDO1Q07953 250 aaKnown RBP3.96□□□□□ -1.78
UBP6YFR010W GEP3Q08622 556 aa3.96□□□□□ -1.78
UBP6YFR010W GRE1Q08969 168 aa3.96□□□□□ -1.78
UBP6YFR010W ECM5Q03214 1411 aa3.96□□□□□ -1.78
UBP6YFR010W PAB1P04147 577 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
UBP6YFR010W RAD1P06777 1100 aa3.95□□□□□ -1.78
UBP6YFR010W RHO1P06780 209 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W ERG20P08524 352 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W PYC1P11154 1178 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W RPL24BP24000 155 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W RBK1P25332 333 aa3.95□□□□□ -1.78
UBP6YFR010W GIT1P25346 518 aa3.95□□□□□ -1.78
UBP6YFR010W PRR1P28708 518 aa3.95□□□□□ -1.78
UBP6YFR010W PRE2P30656 287 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W STE14P32584 239 aa3.95□□□□□ -1.78
UBP6YFR010W FRE1P32791 686 aa3.95□□□□□ -1.78
UBP6YFR010W AST1P35183 429 aa3.95□□□□□ -1.78
UBP6YFR010W RPC25P35718 212 aa3.95□□□□□ -1.78
UBP6YFR010W STB5P38699 743 aa3.95□□□□□ -1.78
UBP6YFR010W YNG2P38806 282 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W SBE22P38814 852 aa3.95□□□□□ -1.78
UBP6YFR010W CHS7P38843 316 aa3.95□□□□□ -1.78
UBP6YFR010W CTF8P38877 133 aa3.95□□□□□ -1.78
UBP6YFR010W SAK1P38990 1142 aa3.95□□□□□ -1.78
UBP6YFR010W SHC1P39000 512 aa3.95□□□□□ -1.78
UBP6YFR010W GIM4P40005 111 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W ICE2P40499 491 aa3.95□□□□□ -1.78
UBP6YFR010W GAB1P41733 394 aa3.95□□□□□ -1.78
UBP6YFR010W DPB11P47027 764 aaPredicted RBP3.95□□□□□ -1.78
UBP6YFR010W SNX4P47057 423 aa3.95□□□□□ -1.78
UBP6YFR010W ASN2P49090 572 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W YGL159WP53110 370 aa3.95□□□□□ -1.78
UBP6YFR010W YGL117WP53133 265 aa3.95□□□□□ -1.78
UBP6YFR010W YGR127WP53275 312 aa3.95□□□□□ -1.78
UBP6YFR010W SKI8Q02793 397 aaPredicted RBP3.95□□□□□ -1.78
UBP6YFR010W MTG1Q03151 367 aaPredicted RBP3.95□□□□□ -1.78
UBP6YFR010W SPO77Q06134 477 aa3.95□□□□□ -1.78
UBP6YFR010W PAM18Q07914 168 aa3.95□□□□□ -1.78
UBP6YFR010W YEH2Q07950 538 aa3.95□□□□□ -1.78
UBP6YFR010W ENB1Q08299 606 aa3.95□□□□□ -1.78
UBP6YFR010W YRA1Q12159 226 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W MSH5Q12175 901 aa3.95□□□□□ -1.78
UBP6YFR010W YOR029WQ12243 111 aa3.95□□□□□ -1.78
UBP6YFR010W SWI1P09547 1314 aa3.95□□□□□ -1.78
UBP6YFR010W COX2P00410 251 aa3.95□□□□□ -1.78
UBP6YFR010W FBA1P14540 359 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W URK1P27515 501 aa3.95□□□□□ -1.78
UBP6YFR010W YIM1P28625 365 aa3.95□□□□□ -1.78
UBP6YFR010W HRR25P29295 494 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W SIN4P32259 974 aa3.95□□□□□ -1.78
UBP6YFR010W YPS1P32329 569 aa3.95□□□□□ -1.78
UBP6YFR010W GCG1P32656 232 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W UGP1P32861 499 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W SKG6P32900 734 aaPredicted RBP3.95□□□□□ -1.78
UBP6YFR010W EHT1P38295 451 aa3.95□□□□□ -1.78
UBP6YFR010W VMA22P38784 181 aa3.95□□□□□ -1.78
UBP6YFR010W ALP1P38971 573 aa3.95□□□□□ -1.78
UBP6YFR010W SAP1P39955 897 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W SDP1P40479 209 aa3.95□□□□□ -1.78
UBP6YFR010W HXT9P40885 567 aa3.95□□□□□ -1.78
UBP6YFR010W IRC8P47046 822 aa3.95□□□□□ -1.78
UBP6YFR010W COX16P47081 118 aa3.95□□□□□ -1.78
UBP6YFR010W BUL1P48524 976 aa3.95□□□□□ -1.78
UBP6YFR010W LSG1P53145 640 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W HXT11P54862 567 aa3.95□□□□□ -1.78
UBP6YFR010W NUP116Q02630 1113 aa3.95□□□□□ -1.78
UBP6YFR010W IRC4Q03036 179 aa3.95□□□□□ -1.78
UBP6YFR010W YDR541CQ03049 344 aa3.95□□□□□ -1.78
UBP6YFR010W CDC123Q05791 360 aa3.95□□□□□ -1.78
UBP6YFR010W VPS36Q06696 566 aa3.95□□□□□ -1.78
UBP6YFR010W ESA1Q08649 445 aa3.95□□□□□ -1.78
UBP6YFR010W AIM41Q12032 185 aa3.95□□□□□ -1.78
UBP6YFR010W YLR108CQ12259 485 aa3.95□□□□□ -1.78
UBP6YFR010W PAA1Q12447 191 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W RRD2Q12461 358 aa3.95□□□□□ -1.78
UBP6YFR010W YDL007C-AQ2V2Q0 85 aa3.95□□□□□ -1.78
UBP6YFR010W LSO2Q3E772 92 aaKnown RBP3.95□□□□□ -1.78
UBP6YFR010W SEY1Q99287 776 aa3.95□□□□□ -1.78
UBP6YFR010W MF(ALPHA)1P01149 165 aa3.94□□□□□ -1.78
UBP6YFR010W REV1P12689 985 aa3.94□□□□□ -1.78
UBP6YFR010W CBF1P17106 351 aa3.94□□□□□ -1.78
UBP6YFR010W VPS1P21576 704 aaKnown RBP3.94□□□□□ -1.78
UBP6YFR010W PTC6P25646 442 aa3.94□□□□□ -1.78
UBP6YFR010W SPS19P32573 292 aaKnown RBP3.94□□□□□ -1.78
UBP6YFR010W EMP70P32802 667 aa3.94□□□□□ -1.78
UBP6YFR010W PRP18P33411 251 aaPredicted RBP3.94□□□□□ -1.78
UBP6YFR010W DBP7P36120 742 aaKnown RBP3.94□□□□□ -1.78
UBP6YFR010W RPF2P36160 344 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms