RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C YSR3P23501 404 aa6.23□□□□□ -1.41
YPT1YFL038C GIT1P25346 518 aa6.23□□□□□ -1.41
YPT1YFL038C TRX3P25372 127 aa6.23□□□□□ -1.41
YPT1YFL038C YJU3P28321 313 aa6.23□□□□□ -1.41
YPT1YFL038C CTS1P29029 562 aa6.23□□□□□ -1.41
YPT1YFL038C NUF2P33895 451 aa6.23□□□□□ -1.41
YPT1YFL038C INM1P38710 295 aa6.23□□□□□ -1.41
YPT1YFL038C YPT35P38815 214 aaKnown RBP6.23□□□□□ -1.41
YPT1YFL038C AXL2P38928 823 aa6.23□□□□□ -1.41
YPT1YFL038C YEL073CP39974 107 aa6.23□□□□□ -1.41
YPT1YFL038C DLD3P39976 496 aaKnown RBP6.23□□□□□ -1.41
YPT1YFL038C SOK1P40317 901 aa6.23□□□□□ -1.41
YPT1YFL038C ERG10P41338 398 aaKnown RBP6.23□□□□□ -1.41
YPT1YFL038C SSU1P41930 458 aa6.23□□□□□ -1.41
YPT1YFL038C ALR2P43553 858 aa6.23□□□□□ -1.41
YPT1YFL038C CAK1P43568 368 aaPredicted RBP6.23□□□□□ -1.41
YPT1YFL038C YFR018CP43599 363 aa6.23□□□□□ -1.41
YPT1YFL038C RPS0BP46654 252 aaKnown RBP6.23□□□□□ -1.41
YPT1YFL038C IMD3P50095 523 aaKnown RBP6.23□□□□□ -1.41
YPT1YFL038C YNL181WP53878 407 aa6.23□□□□□ -1.41
YPT1YFL038C NSE5Q03718 556 aa6.23□□□□□ -1.41
YPT1YFL038C TRM82Q03774 444 aa6.23□□□□□ -1.41
YPT1YFL038C GRX3Q03835 250 aa6.23□□□□□ -1.41
YPT1YFL038C MGR3Q04472 501 aa6.23□□□□□ -1.41
YPT1YFL038C ARG7Q04728 441 aa6.23□□□□□ -1.41
YPT1YFL038C BRE4Q07660 1125 aa6.23□□□□□ -1.41
YPT1YFL038C NGL1Q08213 363 aaKnown RBP6.23□□□□□ -1.41
YPT1YFL038C ATG29Q12092 213 aa6.23□□□□□ -1.41
YPT1YFL038C YGK3Q12222 375 aaPredicted RBP6.23□□□□□ -1.41
YPT1YFL038C CDC31P06704 161 aaKnown RBP6.22□□□□□ -1.41
YPT1YFL038C GCN3P14741 305 aa6.22□□□□□ -1.41
YPT1YFL038C SIR1P21691 654 aa6.22□□□□□ -1.41
YPT1YFL038C RPS1BP23248 255 aaKnown RBP6.22□□□□□ -1.41
YPT1YFL038C RRP7P25368 297 aaPredicted RBP6.22□□□□□ -1.41
YPT1YFL038C PMT1P33775 817 aa6.22□□□□□ -1.41
YPT1YFL038C LOT5P34234 306 aa6.22□□□□□ -1.41
YPT1YFL038C DCW1P36091 449 aa6.22□□□□□ -1.41
YPT1YFL038C BAP2P38084 609 aa6.22□□□□□ -1.41
YPT1YFL038C YHR033WP38690 423 aa6.22□□□□□ -1.41
YPT1YFL038C YHR112CP38716 378 aa6.22□□□□□ -1.41
YPT1YFL038C GGC1P38988 300 aa6.22□□□□□ -1.41
YPT1YFL038C FCY21P40039 528 aa6.22□□□□□ -1.41
YPT1YFL038C LSM5P40089 93 aaKnown RBP6.22□□□□□ -1.41
YPT1YFL038C PSA1P41940 361 aaKnown RBP6.22□□□□□ -1.41
YPT1YFL038C PFA3P42836 336 aa6.22□□□□□ -1.41
YPT1YFL038C PMT4P46971 762 aa6.22□□□□□ -1.41
YPT1YFL038C HOC1P47124 396 aa6.22□□□□□ -1.41
YPT1YFL038C NQM1P53228 333 aaPredicted RBP6.22□□□□□ -1.41
YPT1YFL038C AAT1Q01802 451 aa6.22□□□□□ -1.41
YPT1YFL038C GRX5Q02784 150 aa6.22□□□□□ -1.41
YPT1YFL038C LEE1Q02799 301 aaKnown RBP6.22□□□□□ -1.41
YPT1YFL038C OAZ1Q02803 292 aa6.22□□□□□ -1.41
YPT1YFL038C YMD8Q03697 442 aa6.22□□□□□ -1.41
YPT1YFL038C ARX1Q03862 593 aaKnown RBP6.22□□□□□ -1.41
YPT1YFL038C KRE28Q04431 385 aa6.22□□□□□ -1.41
YPT1YFL038C SWF1Q04629 336 aa6.22□□□□□ -1.41
YPT1YFL038C RRP45Q05636 305 aaKnown RBP6.22□□□□□ -1.41
YPT1YFL038C MRX10Q05648 414 aa6.22□□□□□ -1.41
YPT1YFL038C SFM1Q12314 213 aa6.22□□□□□ -1.41
YPT1YFL038C TSC13Q99190 310 aa6.22□□□□□ -1.41
YPT1YFL038C TY2A-LR1P0C2J4 438 aa6.21□□□□□ -1.42
YPT1YFL038C TY2A-FP0CX61 438 aa6.21□□□□□ -1.42
YPT1YFL038C TY2A-GR2P0CX62 438 aa6.21□□□□□ -1.42
YPT1YFL038C TFS1P14306 219 aa6.21□□□□□ -1.42
YPT1YFL038C TRM1P15565 570 aaKnown RBP6.21□□□□□ -1.42
YPT1YFL038C MER1P16523 270 aa6.21□□□□□ -1.42
YPT1YFL038C TY2A-CP25383 438 aa6.21□□□□□ -1.42
YPT1YFL038C URK1P27515 501 aa6.21□□□□□ -1.42
YPT1YFL038C GUT1P32190 709 aa6.21□□□□□ -1.42
YPT1YFL038C RPN2P32565 945 aaKnown RBP6.21□□□□□ -1.42
YPT1YFL038C STE5P32917 917 aa6.21□□□□□ -1.42
YPT1YFL038C DSF2P38213 736 aa6.21□□□□□ -1.42
YPT1YFL038C GIM4P40005 111 aaKnown RBP6.21□□□□□ -1.42
YPT1YFL038C NTA1P40354 457 aa6.21□□□□□ -1.42
YPT1YFL038C LAS21P40367 830 aa6.21□□□□□ -1.42
YPT1YFL038C YGR201CP42936 225 aa6.21□□□□□ -1.42
YPT1YFL038C GCV1P48015 400 aa6.21□□□□□ -1.42
YPT1YFL038C RAI1P53063 387 aaKnown RBP6.21□□□□□ -1.42
YPT1YFL038C ORM1P53224 222 aa6.21□□□□□ -1.42
YPT1YFL038C RTS3P53289 263 aa6.21□□□□□ -1.42
YPT1YFL038C YGR168CP53293 376 aa6.21□□□□□ -1.42
YPT1YFL038C YNR065CP53751 1116 aa6.21□□□□□ -1.42
YPT1YFL038C YNL034WP53963 612 aa6.21□□□□□ -1.42
YPT1YFL038C TY2A-DR2Q03483 438 aa6.21□□□□□ -1.42
YPT1YFL038C PEX10Q05568 337 aa6.21□□□□□ -1.42
YPT1YFL038C TEN1Q07921 160 aa6.21□□□□□ -1.42
YPT1YFL038C GSH2Q08220 491 aa6.21□□□□□ -1.42
YPT1YFL038C SGO1Q08490 590 aa6.21□□□□□ -1.42
YPT1YFL038C TY2A-BQ12260 438 aa6.21□□□□□ -1.42
YPT1YFL038C RBD2Q12270 262 aa6.21□□□□□ -1.42
YPT1YFL038C TY2A-OR2Q12293 438 aa6.21□□□□□ -1.42
YPT1YFL038C TY2A-DR1Q12392 438 aa6.21□□□□□ -1.42
YPT1YFL038C TY2A-OR1Q12439 438 aa6.21□□□□□ -1.42
YPT1YFL038C TY2A-DR3Q99303 438 aa6.21□□□□□ -1.42
YPT1YFL038C PUT2P07275 575 aa6.2□□□□□ -1.42
YPT1YFL038C ALG7P07286 448 aa6.2□□□□□ -1.42
YPT1YFL038C RER1P25560 188 aa6.2□□□□□ -1.42
YPT1YFL038C CMK1P27466 446 aaKnown RBP6.2□□□□□ -1.42
YPT1YFL038C IDH1P28834 360 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
YPT1YFL038C MAC1P35192 417 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms