RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	NDT80	P38830	627 aa		0.96	□□□□□ -2.26
UBP3	YER151C	FLO5	P38894	1075 aa		0.96	□□□□□ -2.26
UBP3	YER151C	MLH1	P38920	769 aa		0.96	□□□□□ -2.26
UBP3	YER151C	VPS41	P38959	992 aa		0.96	□□□□□ -2.26
UBP3	YER151C	STT3	P39007	718 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	POP2	P39008	433 aa		0.96	□□□□□ -2.26
UBP3	YER151C	NAS6	P50086	228 aa		0.96	□□□□□ -2.26
UBP3	YER151C	RPT6	Q01939	405 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	ELP3	Q02908	557 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	HOT1	Q03213	719 aa		0.96	□□□□□ -2.26
UBP3	YER151C	CEF1	Q03654	590 aa	Predicted RBP	0.96	□□□□□ -2.26
UBP3	YER151C	RTT103	Q05543	409 aa		0.96	□□□□□ -2.26
UBP3	YER151C	MCH1	Q07376	486 aa		0.96	□□□□□ -2.26
UBP3	YER151C	BSC6	Q08280	497 aa		0.96	□□□□□ -2.26
UBP3	YER151C	YOL114C	Q12322	202 aa		0.96	□□□□□ -2.26
UBP3	YER151C	PGI1	P12709	554 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	NCP1	P16603	691 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	ISY1	P21374	235 aa	Predicted RBP	0.96	□□□□□ -2.26
UBP3	YER151C	REC107	P21651	314 aa		0.96	□□□□□ -2.26
UBP3	YER151C	URE2	P23202	354 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	PPH21	P23594	369 aa		0.96	□□□□□ -2.26
UBP3	YER151C	MRPL9	P31334	269 aa		0.96	□□□□□ -2.26
UBP3	YER151C	SPS18	P32572	300 aa		0.96	□□□□□ -2.26
UBP3	YER151C	TOA1	P32773	286 aa		0.96	□□□□□ -2.26
UBP3	YER151C	KES1	P35844	434 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	PTK1	P36002	662 aa	Predicted RBP	0.96	□□□□□ -2.26
UBP3	YER151C	REG2	P38232	338 aa		0.96	□□□□□ -2.26
UBP3	YER151C	YGP1	P38616	354 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	SRP72	P38688	640 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	TDA11	P38854	504 aa		0.96	□□□□□ -2.26
UBP3	YER151C	YMR124W	P39523	943 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	SSU1	P41930	458 aa		0.96	□□□□□ -2.26
UBP3	YER151C	ESF2	P53743	316 aa	Known RBP	0.96	□□□□□ -2.26
UBP3	YER151C	YKR005C	Q02203	525 aa		0.96	□□□□□ -2.26
UBP3	YER151C	PNG1	Q02890	363 aa		0.96	□□□□□ -2.26
UBP3	YER151C	YDR541C	Q03049	344 aa		0.96	□□□□□ -2.26
UBP3	YER151C	MUB1	Q03162	620 aa		0.96	□□□□□ -2.26
UBP3	YER151C	YOL159C	Q08300	171 aa		0.96	□□□□□ -2.26
UBP3	YER151C	ALE1	Q08548	619 aa		0.96	□□□□□ -2.26
UBP3	YER151C	TMA16	Q08687	178 aa		0.96	□□□□□ -2.26
UBP3	YER151C	GPN2	Q08726	347 aa	Predicted RBP	0.96	□□□□□ -2.26
UBP3	YER151C	RRP42	Q12277	265 aa	Predicted RBP	0.96	□□□□□ -2.26
UBP3	YER151C	GPM3	Q12326	303 aa		0.96	□□□□□ -2.26
UBP3	YER151C	ARP7	Q12406	477 aa		0.96	□□□□□ -2.26
UBP3	YER151C	YMR230W-A	Q3E7B5	62 aa		0.96	□□□□□ -2.26
UBP3	YER151C	YAK1	P14680	807 aa		0.95	□□□□□ -2.26
UBP3	YER151C	PET123	P17558	318 aa		0.95	□□□□□ -2.26
UBP3	YER151C	RSA4	P25382	515 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	PEX34	P25584	144 aa		0.95	□□□□□ -2.26
UBP3	YER151C	GAC1	P28006	793 aa		0.95	□□□□□ -2.26
UBP3	YER151C	EXO84	P38261	753 aa		0.95	□□□□□ -2.26
UBP3	YER151C	VMA22	P38784	181 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ERP2	P39704	215 aa		0.95	□□□□□ -2.26
UBP3	YER151C	VPS52	P39904	641 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YRB1	P41920	201 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	STB1	P42845	420 aa		0.95	□□□□□ -2.26
UBP3	YER151C	SMC3	P47037	1230 aa		0.95	□□□□□ -2.26
UBP3	YER151C	CTF18	P49956	741 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ROG1	P53118	685 aa		0.95	□□□□□ -2.26
UBP3	YER151C	BOP3	P53958	396 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YDR391C	Q04170	232 aa		0.95	□□□□□ -2.26
UBP3	YER151C	CAC2	Q04199	468 aa		0.95	□□□□□ -2.26
UBP3	YER151C	PLM2	Q04383	521 aa		0.95	□□□□□ -2.26
UBP3	YER151C	CSM3	Q04659	317 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YLR283W	Q05867	314 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YPR172W	Q06608	200 aa		0.95	□□□□□ -2.26
UBP3	YER151C	SIL1	Q08199	421 aa		0.95	□□□□□ -2.26
UBP3	YER151C	RAX1	Q08760	435 aa		0.95	□□□□□ -2.26
UBP3	YER151C	FMP40	Q08968	688 aa	Predicted RBP	0.95	□□□□□ -2.26
UBP3	YER151C	GPM2	Q12008	311 aa		0.95	□□□□□ -2.26
UBP3	YER151C	AKR2	Q12013	749 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YOR342C	Q12182	319 aa		0.95	□□□□□ -2.26
UBP3	YER151C	HOS1	Q12214	470 aa		0.95	□□□□□ -2.26
UBP3	YER151C	RPL42A	P0CX27	106 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	RPL42B	P0CX28	106 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	MAS2	P11914	482 aa		0.95	□□□□□ -2.26
UBP3	YER151C	CMK2	P22517	447 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ERG8	P24521	451 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ADK2	P26364	225 aa		0.95	□□□□□ -2.26
UBP3	YER151C	NDI1	P32340	513 aa		0.95	□□□□□ -2.26
UBP3	YER151C	SSE2	P32590	693 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	COY1	P34237	679 aa		0.95	□□□□□ -2.26
UBP3	YER151C	DUG2	P38149	878 aa		0.95	□□□□□ -2.26
UBP3	YER151C	FMP23	P38231	175 aa		0.95	□□□□□ -2.26
UBP3	YER151C	RRT2	P38332	387 aa		0.95	□□□□□ -2.26
UBP3	YER151C	EDC3	P39998	551 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	VFA1	P40080	203 aa		0.95	□□□□□ -2.26
UBP3	YER151C	YNL194C	P40169	301 aa		0.95	□□□□□ -2.26
UBP3	YER151C	TES1	P41903	349 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	QRI7	P43122	407 aa		0.95	□□□□□ -2.26
UBP3	YER151C	SIP4	P46954	829 aa		0.95	□□□□□ -2.26
UBP3	YER151C	NBP1	P52919	319 aa	Predicted RBP	0.95	□□□□□ -2.26
UBP3	YER151C	SEH1	P53011	349 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	MPS2	P53159	387 aa		0.95	□□□□□ -2.26
UBP3	YER151C	ORM1	P53224	222 aa		0.95	□□□□□ -2.26
UBP3	YER151C	RRP46	P53256	223 aa	Predicted RBP	0.95	□□□□□ -2.26
UBP3	YER151C	PDR16	P53860	351 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	EAF7	P53911	425 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	ALG11	P53954	548 aa	Known RBP	0.95	□□□□□ -2.26
UBP3	YER151C	GTR1	Q00582	310 aa		0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms