RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	RPA34	P47006	233 aa	Predicted RBP	3.78	□□□□□ -1.8
RPS13	YDR064W	YJR111C	P47148	283 aa	Known RBP	3.78	□□□□□ -1.8
RPS13	YDR064W	YPT32	P51996	222 aa	Known RBP	3.78	□□□□□ -1.8
RPS13	YDR064W	YGL159W	P53110	370 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	TIM10	P87108	93 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	YDR541C	Q03049	344 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	ACL4	Q03771	387 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	TRM82	Q03774	444 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	YMR226C	Q05016	267 aa	Known RBP	3.78	□□□□□ -1.8
RPS13	YDR064W	RFU1	Q08003	200 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	MED7	Q08278	222 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	IMA2	Q08295	589 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	YPR063C	Q12160	140 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	YOP1	Q12402	180 aa		3.78	□□□□□ -1.8
RPS13	YDR064W	DUR1,2	P32528	1835 aa	Known RBP	3.78	□□□□□ -1.8
RPS13	YDR064W	CDC28	P00546	298 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
RPS13	YDR064W	LPD1	P09624	499 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	SPS4	P09937	338 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	INO1	P11986	533 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	GAL3	P13045	520 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	CKA1	P15790	372 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	AAC3	P18238	307 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	SIR1	P21691	654 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	NPR1	P22211	790 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	DBR1	P24309	405 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	YIM1	P28625	365 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	MCM4	P30665	933 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	ACH1	P32316	526 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	ERG3	P32353	365 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	LIP5	P32875	414 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	MNS1	P32906	549 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	SPC29	P33419	253 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	CLG1	P35190	452 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	RPF2	P36160	344 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	MRPL15	P36523	253 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	YCR087C-A	P37263	153 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	ETR1	P38071	380 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	SHE3	P38272	425 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	KSP1	P38691	1029 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	DIA4	P38705	446 aa	Predicted RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	COS8	P38723	381 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	ATG7	P38862	630 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	BUR6	P40096	142 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	CFD1	P40558	293 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	IDP2	P41939	412 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	HXT14	P42833	540 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	RPN11	P43588	306 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	IRC5	P43610	853 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	BIR1	P47134	954 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	SAM37	P50110	327 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	MRK1	P50873	501 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	NPY1	P53164	384 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	PKP2	P53170	491 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	SHY1	P53266	389 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	YGR117C	P53270	476 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	YGR250C	P53316	781 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	CUS2	P53830	285 aa	Predicted RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	MTQ1	P53944	314 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	PEX13	P80667	386 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	RHO3	Q00245	231 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	MSC1	Q03104	513 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	URH1	Q04179	340 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	MRPL1	Q04599	285 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	RQC1	Q05468	723 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	ADY4	Q05955	493 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	CDA1	Q06702	301 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	YET3	Q07451	203 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	LDB18	Q07887	179 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	GUP2	Q08929	609 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	GET3	Q12154	354 aa	Known RBP	3.77	□□□□□ -1.81
RPS13	YDR064W	YOR114W	Q12219	294 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
RPS13	YDR064W	SFM1	Q12314	213 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	YDR262W	Q12331	272 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	DGK1	Q12382	290 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	FMP16	Q12497	93 aa		3.77	□□□□□ -1.81
RPS13	YDR064W	YOR304C-A	O14468	76 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	CYC7	P00045	113 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	MF(ALPHA)1	P01149	165 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	URA3	P03962	267 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	ARG4	P04076	463 aa	Predicted RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	RPL27A	P0C2H6	136 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	RPL27B	P0C2H7	136 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	SEC18	P18759	758 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	PRE7	P23724	241 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	VMA5	P31412	392 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	MVD1	P32377	396 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	RNP1	P32385	249 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	LHP1	P33399	275 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	RPS1A	P33442	255 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	RPC25	P35718	212 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	OAR1	P35731	278 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	KKQ8	P36004	724 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	UTP30	P36144	274 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	YKR078W	P36158	585 aa	Known RBP	3.76	□□□□□ -1.81
RPS13	YDR064W	MRPL3	P36516	390 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	RRN10	P38204	145 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	YBR259W	P38338	688 aa		3.76	□□□□□ -1.81
RPS13	YDR064W	BIT2	P38346	545 aa		3.76	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms