RNA–Protein interactions for RNA: YDR041W

RSM10, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM10, Length 612 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM10	YDR041W	AAD15	Q08361	143 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	PUS9	Q12069	462 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	YDR262W	Q12331	272 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	YOR012W	Q12351	137 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	SSK22	P25390	1331 aa	Predicted RBP	4.93	□□□□□ -1.62
RSM10	YDR041W	ADE4	P04046	510 aa	Known RBP	4.92	□□□□□ -1.62
RSM10	YDR041W	MSF1	P08425	469 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	NFT1	P0CE68	1218 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	AMD2	P22580	549 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	MGR1	P25573	417 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	GSY2	P27472	705 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	RAD23	P32628	398 aa	Known RBP	4.92	□□□□□ -1.62
RSM10	YDR041W	KDX1	P36005	433 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	RTC2	P38279	296 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	YHR122W	P38829	231 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	GPI16	P38875	610 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	MBB1	P39534	108 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	SNL1	P40548	159 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	IRC24	P40580	263 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	BNA3	P47039	444 aa	Known RBP	4.92	□□□□□ -1.62
RSM10	YDR041W	BIO3	P50277	480 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	COG2	P53271	262 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	SLG1	P54867	378 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	MRP51	Q02950	344 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	EMI2	Q04409	500 aa	Known RBP	4.92	□□□□□ -1.62
RSM10	YDR041W	UFO1	Q04511	668 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	YLR283W	Q05867	314 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	CTS2	Q06350	511 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	LOT6	Q07923	191 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	SPO24	Q3E752	67 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	YBL111C	Q3E7Y5	667 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	LAG2	Q92325	660 aa		4.92	□□□□□ -1.62
RSM10	YDR041W	MET3	P08536	511 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	ITR1	P30605	584 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	YSC83	P32792	385 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	TRM2	P33753	639 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	AIM29	P36154	155 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	QDR3	P38227	689 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	VBA2	P38358	474 aa	Known RBP	4.91	□□□□□ -1.62
RSM10	YDR041W	MTW1	P39731	289 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	GAT2	P40209	560 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
RSM10	YDR041W	TAX4	P47030	604 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	HAM1	P47119	197 aa	Known RBP	4.91	□□□□□ -1.62
RSM10	YDR041W	HSH155	P49955	971 aa	Known RBP	4.91	□□□□□ -1.62
RSM10	YDR041W	YIP4	P53093	235 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	SLT2	Q00772	484 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	SHR3	Q02774	210 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	RLI1	Q03195	608 aa	Known RBP	4.91	□□□□□ -1.62
RSM10	YDR041W	YMR178W	Q03219	274 aa	Known RBP	4.91	□□□□□ -1.62
RSM10	YDR041W	YLR224W	Q05947	369 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	RGC1	Q06108	1083 aa	Known RBP	4.91	□□□□□ -1.62
RSM10	YDR041W	YDL086W	Q07505	273 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	LCB4	Q12246	624 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	PAA1	Q12447	191 aa	Known RBP	4.91	□□□□□ -1.62
RSM10	YDR041W	RMD5	Q12508	421 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	YKL033W-A	Q86ZR7	236 aa		4.91	□□□□□ -1.62
RSM10	YDR041W	COX3	P00420	269 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	RAD3	P06839	778 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	YLL053C	P0CD98	152 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	PRP16	P15938	1071 aa	Predicted RBP	4.9	□□□□□ -1.63
RSM10	YDR041W	HXT1	P32465	570 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	LST4	P34239	828 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	ADE17	P38009	592 aa	Known RBP	4.9	□□□□□ -1.63
RSM10	YDR041W	APL3	P38065	1025 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	IML3	P38265	245 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RSM10	YDR041W	UBC11	P52492	156 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	LIF1	P53150	421 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	ZPR1	P53303	486 aa	Known RBP	4.9	□□□□□ -1.63
RSM10	YDR041W	MRPL50	P53724	139 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	MSC1	Q03104	513 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	COX20	Q04935	205 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	YML053C	Q04978	212 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	TMA10	Q06177	86 aa		4.9	□□□□□ -1.63
RSM10	YDR041W	DNL4	Q08387	944 aa	Predicted RBP	4.9	□□□□□ -1.63
RSM10	YDR041W	SLF1	Q12034	447 aa	Known RBP	4.9	□□□□□ -1.63
RSM10	YDR041W	TDH2	P00358	332 aa	Known RBP	4.89	□□□□□ -1.63
RSM10	YDR041W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
RSM10	YDR041W	NHP6B	P11633	99 aa	Known RBP	4.89	□□□□□ -1.63
RSM10	YDR041W	COQ1	P18900	473 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	YSR3	P23501	404 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	CIN8	P27895	1000 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	PPA2	P28239	310 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	CWP1	P28319	239 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	EMP70	P32802	667 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	IMP3	P32899	183 aa	Predicted RBP	4.89	□□□□□ -1.63
RSM10	YDR041W	RPC34	P32910	317 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	SHP1	P34223	423 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	MMS21	P38632	267 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	INM1	P38710	295 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	RFC4	P40339	323 aa	Known RBP	4.89	□□□□□ -1.63
RSM10	YDR041W	SDS3	P40505	327 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	TFG2	P41896	400 aa	Predicted RBP	4.89	□□□□□ -1.63
RSM10	YDR041W	MRX5	P47007	382 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	STE24	P47154	453 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	KAP114	P53067	1004 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	ATG4	P53867	494 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	SPP2	Q02521	185 aa		4.89	□□□□□ -1.63
RSM10	YDR041W	RRP17	Q04031	235 aa	Predicted RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms