RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C VPS62P53285 467 aa4.41□□□□□ -1.7
CDC48YDL126C TEX1P53851 422 aaKnown RBP4.41□□□□□ -1.7
CDC48YDL126C RPL6AQ02326 176 aaKnown RBP4.41□□□□□ -1.7
CDC48YDL126C CLU1Q03690 1277 aaKnown RBP4.41□□□□□ -1.7
CDC48YDL126C PPN1Q04119 674 aa4.41□□□□□ -1.7
CDC48YDL126C SFH1Q06168 426 aa4.41□□□□□ -1.7
CDC48YDL126C YPR091CQ06833 770 aa4.41□□□□□ -1.7
CDC48YDL126C GSH2Q08220 491 aa4.41□□□□□ -1.7
CDC48YDL126C EMP46Q12396 444 aa4.41□□□□□ -1.7
CDC48YDL126C VCX1Q99385 411 aa4.41□□□□□ -1.7
CDC48YDL126C AI1P03875 834 aa4.4□□□□□ -1.7
CDC48YDL126C CDC33P07260 213 aaKnown RBP4.4□□□□□ -1.7
CDC48YDL126C MET3P08536 511 aa4.4□□□□□ -1.7
CDC48YDL126C HMG2P12684 1045 aa4.4□□□□□ -1.7
CDC48YDL126C RNR1P21524 888 aaKnown RBP4.4□□□□□ -1.7
CDC48YDL126C YUR1P26725 428 aa4.4□□□□□ -1.7
CDC48YDL126C ARP2P32381 391 aaKnown RBP4.4□□□□□ -1.7
CDC48YDL126C SDS22P36047 338 aa4.4□□□□□ -1.7
CDC48YDL126C CAF4P36130 643 aa4.4□□□□□ -1.7
CDC48YDL126C GLG1P36143 616 aa4.4□□□□□ -1.7
CDC48YDL126C APE3P37302 537 aaKnown RBP4.4□□□□□ -1.7
CDC48YDL126C SFB3P38810 929 aa4.4□□□□□ -1.7
CDC48YDL126C MPT5P39016 859 aaKnown RBP RIP-Chip data4.4□□□□□ -1.7not detected
CDC48YDL126C ALG5P40350 334 aa4.4□□□□□ -1.7
CDC48YDL126C BAP3P41815 604 aa4.4□□□□□ -1.7
CDC48YDL126C MIC19P43594 170 aa4.4□□□□□ -1.7
CDC48YDL126C BUL1P48524 976 aa4.4□□□□□ -1.7
CDC48YDL126C YNR014WP53719 212 aa4.4□□□□□ -1.7
CDC48YDL126C DIG1Q03063 452 aaKnown RBP4.4□□□□□ -1.7
CDC48YDL126C FIN1Q03898 291 aa4.4□□□□□ -1.7
CDC48YDL126C SPO77Q06134 477 aa4.4□□□□□ -1.7
CDC48YDL126C LDB17Q12342 491 aa4.4□□□□□ -1.7
CDC48YDL126C AHC1Q12433 566 aa4.4□□□□□ -1.7
CDC48YDL126C ABF1P14164 731 aa4.4□□□□□ -1.71
CDC48YDL126C VPS33P20795 691 aa4.4□□□□□ -1.71
CDC48YDL126C DGR2P32330 852 aa4.4□□□□□ -1.71
CDC48YDL126C AST1P35183 429 aa4.4□□□□□ -1.71
CDC48YDL126C VID24P38263 362 aa4.4□□□□□ -1.71
CDC48YDL126C LSM12P38828 187 aaKnown RBP4.4□□□□□ -1.71
CDC48YDL126C PRM9P39551 298 aa4.4□□□□□ -1.71
CDC48YDL126C YTA12P40341 825 aa4.4□□□□□ -1.71
CDC48YDL126C CAB2P40506 365 aa4.4□□□□□ -1.71
CDC48YDL126C MSS2P40990 351 aa4.4□□□□□ -1.71
CDC48YDL126C CPR7P47103 393 aa4.4□□□□□ -1.71
CDC48YDL126C ORC5P50874 479 aa4.4□□□□□ -1.71
CDC48YDL126C YDR132CQ03900 495 aa4.4□□□□□ -1.71
CDC48YDL126C URH1Q04179 340 aa4.4□□□□□ -1.71
CDC48YDL126C SEG1Q04279 960 aa4.4□□□□□ -1.71
CDC48YDL126C SMA2Q04658 369 aa4.4□□□□□ -1.71
CDC48YDL126C ECI1Q05871 280 aa4.4□□□□□ -1.71
CDC48YDL126C AIM6Q07716 390 aa4.4□□□□□ -1.71
CDC48YDL126C ATG34Q12292 412 aa4.4□□□□□ -1.71
CDC48YDL126C ATG11Q12527 1178 aa4.4□□□□□ -1.71
CDC48YDL126C RPL25P04456 142 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C KIN82P25341 720 aa4.39□□□□□ -1.71
CDC48YDL126C GCG1P32656 232 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C ATO2P32907 282 aa4.39□□□□□ -1.71
CDC48YDL126C VPS21P36017 210 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C RFS1P38234 210 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C LSM1P47017 172 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C RPC17P47076 161 aa4.39□□□□□ -1.71
CDC48YDL126C AIM24P47127 394 aa4.39□□□□□ -1.71
CDC48YDL126C YPT32P51996 222 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C PUS2P53167 370 aa4.39□□□□□ -1.71
CDC48YDL126C YNL143CP53908 130 aa4.39□□□□□ -1.71
CDC48YDL126C SLT2Q00772 484 aa4.39□□□□□ -1.71
CDC48YDL126C NSE1Q07913 336 aa4.39□□□□□ -1.71
CDC48YDL126C RTR2Q12378 196 aa4.39□□□□□ -1.71
CDC48YDL126C ZRT2Q12436 422 aa4.39□□□□□ -1.71
CDC48YDL126C YBR126W-AQ8TGU7 68 aa4.39□□□□□ -1.71
CDC48YDL126C TRP3P00937 484 aa4.39□□□□□ -1.71
CDC48YDL126C HIS5P07172 385 aa4.39□□□□□ -1.71
CDC48YDL126C MAS2P11914 482 aa4.39□□□□□ -1.71
CDC48YDL126C KIN2P13186 1147 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C POX1P13711 748 aa4.39□□□□□ -1.71
CDC48YDL126C DAL2P25335 343 aa4.39□□□□□ -1.71
CDC48YDL126C CSG2P35206 410 aa4.39□□□□□ -1.71
CDC48YDL126C KES1P35844 434 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C EHT1P38295 451 aa4.39□□□□□ -1.71
CDC48YDL126C AGE2P40529 298 aa4.39□□□□□ -1.71
CDC48YDL126C LSM8P47093 109 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C MTR3P48240 250 aaPredicted RBP4.39□□□□□ -1.71
CDC48YDL126C BPL1P48445 690 aaPredicted RBP4.39□□□□□ -1.71
CDC48YDL126C BRO1P48582 844 aa4.39□□□□□ -1.71
CDC48YDL126C COG2P53271 262 aa4.39□□□□□ -1.71
CDC48YDL126C RPL22BP56628 122 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C UTP6Q02354 440 aaKnown RBP4.39□□□□□ -1.71
CDC48YDL126C SMA1Q02651 245 aa4.39□□□□□ -1.71
CDC48YDL126C YPL034WQ03083 165 aa4.39□□□□□ -1.71
CDC48YDL126C USA1Q03714 838 aa4.39□□□□□ -1.71
CDC48YDL126C ARO10Q06408 635 aa4.39□□□□□ -1.71
CDC48YDL126C SHS1Q07657 551 aa4.39□□□□□ -1.71
CDC48YDL126C RBD2Q12270 262 aa4.39□□□□□ -1.71
CDC48YDL126C NTO1Q12311 748 aa4.39□□□□□ -1.71
CDC48YDL126C CDC42P19073 191 aa4.38□□□□□ -1.71
CDC48YDL126C GEX1P25596 615 aa4.38□□□□□ -1.71
CDC48YDL126C SKG6P32900 734 aaPredicted RBP4.38□□□□□ -1.71
CDC48YDL126C RRT2P38332 387 aa4.38□□□□□ -1.71
CDC48YDL126C HIS2P38635 335 aa4.38□□□□□ -1.71
CDC48YDL126C RFX1P48743 811 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms