RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W DLD2P46681 530 aaKnown RBP2.07□□□□□ -2.08
UBP1YDL122W SNG1P46950 547 aa2.07□□□□□ -2.08
UBP1YDL122W YJL132WP47014 750 aa2.07□□□□□ -2.08
UBP1YDL122W NOP9P47077 666 aaKnown RBP2.07□□□□□ -2.08
UBP1YDL122W HOC1P47124 396 aa2.07□□□□□ -2.08
UBP1YDL122W COS5P47187 383 aa2.07□□□□□ -2.08
UBP1YDL122W YDL183CP48569 320 aa2.07□□□□□ -2.08
UBP1YDL122W VPS9P54787 451 aa2.07□□□□□ -2.08
UBP1YDL122W ERG13P54839 491 aaKnown RBP2.07□□□□□ -2.08
UBP1YDL122W SSL2Q00578 843 aa2.07□□□□□ -2.08
UBP1YDL122W REG1Q00816 1014 aa2.07□□□□□ -2.08
UBP1YDL122W TY2A-DR2Q03483 438 aa2.07□□□□□ -2.08
UBP1YDL122W RAD30Q04049 632 aa2.07□□□□□ -2.08
UBP1YDL122W YDR286CQ05530 114 aa2.07□□□□□ -2.08
UBP1YDL122W ADY3Q07732 790 aa2.07□□□□□ -2.08
UBP1YDL122W THI20Q08224 551 aa2.07□□□□□ -2.08
UBP1YDL122W DIA2Q08496 732 aaPredicted RBP2.07□□□□□ -2.08
UBP1YDL122W TY2A-BQ12260 438 aa2.07□□□□□ -2.08
UBP1YDL122W TY2A-OR2Q12293 438 aa2.07□□□□□ -2.08
UBP1YDL122W PSY3Q12318 242 aa2.07□□□□□ -2.08
UBP1YDL122W GTT2Q12390 233 aa2.07□□□□□ -2.08
UBP1YDL122W TY2A-DR1Q12392 438 aa2.07□□□□□ -2.08
UBP1YDL122W TY2A-OR1Q12439 438 aa2.07□□□□□ -2.08
UBP1YDL122W POM34Q12445 299 aa2.07□□□□□ -2.08
UBP1YDL122W NOP58Q12499 511 aaKnown RBP2.07□□□□□ -2.08
UBP1YDL122W TY2A-DR3Q99303 438 aa2.07□□□□□ -2.08
UBP1YDL122W FLO9P39712 1322 aa2.06□□□□□ -2.08
UBP1YDL122W ATP2P00830 511 aaKnown RBP2.06□□□□□ -2.08
UBP1YDL122W PRB1P09232 635 aa2.06□□□□□ -2.08
UBP1YDL122W MATALPHA2P0CY08 210 aa2.06□□□□□ -2.08
UBP1YDL122W HMLALPHA2P0CY09 210 aa2.06□□□□□ -2.08
UBP1YDL122W GLK1P17709 500 aaKnown RBP2.06□□□□□ -2.08
UBP1YDL122W MET16P18408 261 aaPredicted RBP2.06□□□□□ -2.08
UBP1YDL122W PRP4P20053 465 aaKnown RBP2.06□□□□□ -2.08
UBP1YDL122W ISY1P21374 235 aaPredicted RBP2.06□□□□□ -2.08
UBP1YDL122W FET3P38993 636 aa2.06□□□□□ -2.08
UBP1YDL122W FLC2P39719 783 aa2.06□□□□□ -2.08
UBP1YDL122W YEL073CP39974 107 aa2.06□□□□□ -2.08
UBP1YDL122W YIL166CP40445 542 aa2.06□□□□□ -2.08
UBP1YDL122W CIK1Q01649 594 aa2.06□□□□□ -2.08
UBP1YDL122W PLB2Q03674 706 aa2.06□□□□□ -2.08
UBP1YDL122W UFO1Q04511 668 aa2.06□□□□□ -2.08
UBP1YDL122W GRS2Q06817 618 aa2.06□□□□□ -2.08
UBP1YDL122W VAM6Q07468 1049 aa2.06□□□□□ -2.08
UBP1YDL122W TCO89Q08921 799 aa2.06□□□□□ -2.08
UBP1YDL122W NUS1Q12063 375 aa2.06□□□□□ -2.08
UBP1YDL122W LYS21Q12122 440 aaKnown RBP2.06□□□□□ -2.08
UBP1YDL122W NMD4Q12129 218 aa2.06□□□□□ -2.08
UBP1YDL122W ERG27Q12452 347 aaKnown RBP2.06□□□□□ -2.08
UBP1YDL122W PPR1P07272 904 aaPredicted RBP2.06□□□□□ -2.08
UBP1YDL122W STE12P13574 688 aa2.06□□□□□ -2.08
UBP1YDL122W YSR3P23501 404 aa2.06□□□□□ -2.08
UBP1YDL122W AAT2P23542 418 aaKnown RBP2.06□□□□□ -2.08
UBP1YDL122W AAD3P25612 363 aa2.06□□□□□ -2.08
UBP1YDL122W MDL1P33310 695 aa2.06□□□□□ -2.08
UBP1YDL122W SKT5P34226 696 aa2.06□□□□□ -2.08
UBP1YDL122W EHT1P38295 451 aa2.06□□□□□ -2.08
UBP1YDL122W YHL017WP38745 532 aa2.06□□□□□ -2.08
UBP1YDL122W PSD1P39006 500 aa2.06□□□□□ -2.08
UBP1YDL122W MNN5P46982 586 aa2.06□□□□□ -2.08
UBP1YDL122W CPR7P47103 393 aa2.06□□□□□ -2.08
UBP1YDL122W GTF1P53260 183 aaPredicted RBP2.06□□□□□ -2.08
UBP1YDL122W YPR003CP53394 754 aa2.06□□□□□ -2.08
UBP1YDL122W OGG1P53397 376 aaPredicted RBP2.06□□□□□ -2.08
UBP1YDL122W TEX1P53851 422 aaKnown RBP2.06□□□□□ -2.08
UBP1YDL122W YPL068CQ02749 293 aa2.06□□□□□ -2.08
UBP1YDL122W NRG1Q03125 231 aa2.06□□□□□ -2.08
UBP1YDL122W ROT1Q03691 256 aa2.06□□□□□ -2.08
UBP1YDL122W ARX1Q03862 593 aaKnown RBP2.06□□□□□ -2.08
UBP1YDL122W GAS2Q06135 555 aa2.06□□□□□ -2.08
UBP1YDL122W AIM6Q07716 390 aa2.06□□□□□ -2.08
UBP1YDL122W PGC1Q08959 321 aa2.06□□□□□ -2.08
UBP1YDL122W PAB1P04147 577 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
UBP1YDL122W HEM2P05373 342 aa2.05□□□□□ -2.08
UBP1YDL122W CBS1P14066 229 aa2.05□□□□□ -2.08
UBP1YDL122W PWP1P21304 576 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W ERG8P24521 451 aa2.05□□□□□ -2.08
UBP1YDL122W ADY2P25613 283 aa2.05□□□□□ -2.08
UBP1YDL122W GSY2P27472 705 aa2.05□□□□□ -2.08
UBP1YDL122W YPT53P36019 220 aa2.05□□□□□ -2.08
UBP1YDL122W TUL1P36096 758 aa2.05□□□□□ -2.08
UBP1YDL122W ALY1P36117 915 aa2.05□□□□□ -2.08
UBP1YDL122W ICS2P38284 255 aa2.05□□□□□ -2.08
UBP1YDL122W TDP1P38319 544 aa2.05□□□□□ -2.08
UBP1YDL122W POP2P39008 433 aa2.05□□□□□ -2.08
UBP1YDL122W IDS2P46958 469 aa2.05□□□□□ -2.08
UBP1YDL122W AAD10P47182 288 aa2.05□□□□□ -2.08
UBP1YDL122W GPI8P49018 411 aa2.05□□□□□ -2.08
UBP1YDL122W NBP1P52919 319 aaPredicted RBP2.05□□□□□ -2.08
UBP1YDL122W ATG4P53867 494 aa2.05□□□□□ -2.08
UBP1YDL122W KTR6P54070 446 aa2.05□□□□□ -2.08
UBP1YDL122W YML119WQ03208 357 aa2.05□□□□□ -2.08
UBP1YDL122W NGL3Q03210 505 aa2.05□□□□□ -2.08
UBP1YDL122W CTK1Q03957 528 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W PPM1Q04081 328 aa2.05□□□□□ -2.08
UBP1YDL122W CYK3Q07533 885 aa2.05□□□□□ -2.08
UBP1YDL122W YLR036CQ07986 203 aa2.05□□□□□ -2.08
UBP1YDL122W CUE5Q08412 411 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W TMA16Q08687 178 aa2.05□□□□□ -2.08
UBP1YDL122W COX5AP00424 153 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms