RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	RPL10	P41805	221 aa	Known RBP	3.99	□□□□□ -1.77
RPN6	YDL097C	RPE1	P46969	238 aa		3.99	□□□□□ -1.77
RPN6	YDL097C	MDV1	P47025	714 aa		3.99	□□□□□ -1.77
RPN6	YDL097C	ALY2	P47029	1046 aa		3.99	□□□□□ -1.77
RPN6	YDL097C	NOG2	P53742	486 aa	Known RBP	3.99	□□□□□ -1.77
RPN6	YDL097C	EAF7	P53911	425 aa	Known RBP	3.99	□□□□□ -1.77
RPN6	YDL097C	BOP2	Q06150	570 aa		3.99	□□□□□ -1.77
RPN6	YDL097C	NRT1	Q08485	598 aa		3.99	□□□□□ -1.77
RPN6	YDL097C	ATG29	Q12092	213 aa		3.99	□□□□□ -1.77
RPN6	YDL097C	YVC1	Q12324	675 aa		3.99	□□□□□ -1.77
RPN6	YDL097C	FOL3	Q12676	427 aa	Predicted RBP	3.99	□□□□□ -1.77
RPN6	YDL097C	STP22	P25604	385 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	HRR25	P29295	494 aa	Known RBP	3.98	□□□□□ -1.77
RPN6	YDL097C	RPC82	P32349	654 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	RAD5	P32849	1169 aa	Predicted RBP	3.98	□□□□□ -1.77
RPN6	YDL097C	APT2	P36973	181 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	IFA38	P38286	347 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	INM1	P38710	295 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	YHL044W	P38727	235 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	YHL037C	P38733	133 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	OAF1	P39720	1047 aa	Predicted RBP	3.98	□□□□□ -1.77
RPN6	YDL097C	CIN1	P40987	1014 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	GZF3	P42944	551 aa	Known RBP	3.98	□□□□□ -1.77
RPN6	YDL097C	TAH11	P47112	604 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	RNR4	P49723	345 aa	Known RBP	3.98	□□□□□ -1.77
RPN6	YDL097C	PFA5	Q03289	374 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	NHX1	Q04121	633 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	ERV41	Q04651	352 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	YPR174C	Q06616	221 aa	Predicted RBP	3.98	□□□□□ -1.77
RPN6	YDL097C	RSC58	Q07979	502 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	AFT2	Q08957	416 aa		3.98	□□□□□ -1.77
RPN6	YDL097C	PHO5	P00635	467 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	COR1	P07256	457 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	YAR066W	P0CX18	203 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	YHR214W	P0CX19	203 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	NDI1	P32340	513 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	SUI1	P32911	108 aa	Known RBP	3.97	□□□□□ -1.77
RPN6	YDL097C	VPS24	P36095	224 aa	Known RBP	3.97	□□□□□ -1.77
RPN6	YDL097C	FRT2	P39734	528 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	AVT7	P40501	490 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	YIR014W	P40570	242 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	MMM1	P41800	426 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	YJL043W	P47053	257 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
RPN6	YDL097C	MPS2	P53159	387 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	YGR067C	P53243	804 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	TRS31	Q03337	283 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	EBS1	Q03466	884 aa	Known RBP	3.97	□□□□□ -1.77
RPN6	YDL097C	VMS1	Q04311	632 aa	Known RBP	3.97	□□□□□ -1.77
RPN6	YDL097C	IVY1	Q04934	453 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	YPR078C	Q06813	372 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	PSY3	Q12318	242 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	LDB17	Q12342	491 aa		3.97	□□□□□ -1.77
RPN6	YDL097C	SLH1	P53327	1967 aa	Known RBP	3.97	□□□□□ -1.77
RPN6	YDL097C	DIF1	O13577	133 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	RPL22A	P05749	121 aa	Known RBP	3.96	□□□□□ -1.77
RPN6	YDL097C	HEM4	P06174	275 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	LEU4	P06208	619 aa	Known RBP	3.96	□□□□□ -1.77
RPN6	YDL097C	YSF3	P0C074	85 aa	Predicted RBP	3.96	□□□□□ -1.77
RPN6	YDL097C	GAL3	P13045	520 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	DAP2	P18962	818 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	PRP6	P19735	899 aa	Predicted RBP	3.96	□□□□□ -1.77
RPN6	YDL097C	YCL002C	P25565	263 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	DBF20	P32328	564 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	OAR1	P35731	278 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	YSW1	P38280	609 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	NDE1	P40215	560 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	NDC80	P40460	691 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	RLP7	P40693	322 aa	Known RBP	3.96	□□□□□ -1.77
RPN6	YDL097C	NMD5	P46970	1048 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	NIT2	P47016	307 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	YJR141W	P47172	347 aa	Predicted RBP	3.96	□□□□□ -1.77
RPN6	YDL097C	NOP15	P53927	220 aa	Predicted RBP	3.96	□□□□□ -1.77
RPN6	YDL097C	LRS4	Q04087	347 aa	Known RBP	3.96	□□□□□ -1.77
RPN6	YDL097C	SOV1	Q04748	898 aa		3.96	□□□□□ -1.77
RPN6	YDL097C	HRI1	Q05905	244 aa	Known RBP	3.96	□□□□□ -1.77
RPN6	YDL097C	ERG1	P32476	496 aa	Known RBP	3.95	□□□□□ -1.78
RPN6	YDL097C	RRN3	P36070	627 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	APD1	P38281	316 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	PAC11	P40960	533 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	AZF1	P41696	914 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	SHR5	P41912	237 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	RET2	P43621	546 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	UBC9	P50623	157 aa	Predicted RBP	3.95	□□□□□ -1.78
RPN6	YDL097C	KAP114	P53067	1004 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	ROG1	P53118	685 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	PET117	Q02771	107 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	GAS3	Q03655	524 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	APC4	Q04601	652 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	RMP1	Q12530	201 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	BRR1	Q99177	341 aa	Predicted RBP	3.95	□□□□□ -1.78
RPN6	YDL097C	CDC37	P06101	506 aa	Known RBP	3.95	□□□□□ -1.78
RPN6	YDL097C	ENA1	P13587	1091 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	DAL3	P32459	195 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	PSY4	P38193	441 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	DIA4	P38705	446 aa	Predicted RBP	3.95	□□□□□ -1.78
RPN6	YDL097C	SET5	P38890	526 aa	Known RBP	3.95	□□□□□ -1.78
RPN6	YDL097C	FLC2	P39719	783 aa		3.95	□□□□□ -1.78
RPN6	YDL097C	GPP2	P40106	250 aa	Known RBP	3.95	□□□□□ -1.78
RPN6	YDL097C	JEM1	P40358	645 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms