RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene RXT3, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT3	YDL076C	THR1	P17423	357 aa	Known RBP	4.24	□□□□□ -1.73
RXT3	YDL076C	LDB16	P25587	256 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	PRE2	P30656	287 aa	Known RBP	4.24	□□□□□ -1.73
RXT3	YDL076C	UBC6	P33296	250 aa	Predicted RBP	4.24	□□□□□ -1.73
RXT3	YDL076C	SKN1	P33336	771 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	MPE1	P35728	441 aa	Known RBP	4.24	□□□□□ -1.73
RXT3	YDL076C	DEF1	P35732	738 aa	Known RBP	4.24	□□□□□ -1.73
RXT3	YDL076C	ELF1	P36053	145 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	MRPL15	P36523	253 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	YEL073C	P39974	107 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	YER010C	P40011	234 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	MEP1	P40260	492 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	CFD1	P40558	293 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	COS12	P53053	380 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	FRE4	P53746	719 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	MTG1	Q03151	367 aa	Predicted RBP	4.24	□□□□□ -1.73
RXT3	YDL076C	RRP45	Q05636	305 aa	Known RBP	4.24	□□□□□ -1.73
RXT3	YDL076C	AIM6	Q07716	390 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	YLR040C	Q07988	224 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	COX17	Q12287	69 aa		4.24	□□□□□ -1.73
RXT3	YDL076C	IRA1	P18963	3092 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	ILS1	P09436	1072 aa	Known RBP	4.23	□□□□□ -1.73
RXT3	YDL076C	NSP1	P14907	823 aa	Known RBP	4.23	□□□□□ -1.73
RXT3	YDL076C	ROX1	P25042	368 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	RAD57	P25301	460 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	IMG1	P25626	169 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	URA10	P30402	227 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	SMI1	P32566	505 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	SRB5	P32585	307 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	SFC1	P33303	322 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	NUP120	P35729	1037 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	RPC37	P36121	282 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	APL3	P38065	1025 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	DHH1	P39517	506 aa	Known RBP	4.23	□□□□□ -1.73
RXT3	YDL076C	YEL068C	P39977	110 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	ELP2	P42935	788 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	YGR151C	P53287	111 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	CWC22	P53333	577 aa	Known RBP	4.23	□□□□□ -1.73
RXT3	YDL076C	EFR3	Q03653	782 aa	Known RBP	4.23	□□□□□ -1.73
RXT3	YDL076C	VHS1	Q03785	461 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	ATG23	Q06671	453 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	TSR2	Q06672	205 aa	Known RBP	4.23	□□□□□ -1.73
RXT3	YDL076C	NTO1	Q12311	748 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	AVL9	Q12500	764 aa		4.23	□□□□□ -1.73
RXT3	YDL076C	PNO1	Q99216	274 aa	Known RBP	4.23	□□□□□ -1.73
RXT3	YDL076C	IMA3	P0CW40	589 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	IMA4	P0CW41	589 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	FUR1	P18562	216 aa	Known RBP	4.22	□□□□□ -1.73
RXT3	YDL076C	RPB4	P20433	221 aa	Predicted RBP	4.22	□□□□□ -1.73
RXT3	YDL076C	SEC62	P21825	274 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	GID7	P25569	745 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	BUB3	P26449	341 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	MFT1	P33441	392 aa	Known RBP	4.22	□□□□□ -1.73
RXT3	YDL076C	TIP20	P33891	701 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	MUD2	P36084	527 aa	Known RBP	4.22	□□□□□ -1.73
RXT3	YDL076C	YHR097C	P38809	366 aa	Known RBP	4.22	□□□□□ -1.73
RXT3	YDL076C	CHS7	P38843	316 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	LNP1	P38878	278 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	ARB1	P40024	610 aa	Known RBP	4.22	□□□□□ -1.73
RXT3	YDL076C	RIC1	P40395	1056 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	EFM4	P40516	257 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	PET130	P47065	347 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	TRM9	P49957	279 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	RPL22B	P56628	122 aa	Known RBP	4.22	□□□□□ -1.73
RXT3	YDL076C	NHP10	Q03435	203 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	TRM12	Q04235	462 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	SNO4	Q04902	237 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	VAC14	Q06708	880 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	IMA2	Q08295	589 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	HSP33	Q08914	237 aa	Known RBP	4.22	□□□□□ -1.73
RXT3	YDL076C	YPL272C	Q08984	517 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	HSP32	Q08992	237 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	APL4	Q12028	832 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	RKI1	Q12189	258 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	GLE1	Q12315	538 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	FRE7	Q12333	620 aa		4.22	□□□□□ -1.73
RXT3	YDL076C	YLR302C	O13544	120 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	RAD10	P06838	210 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	FUM1	P08417	488 aa	Known RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	HOM3	P10869	527 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	SAN1	P22470	610 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	YSR3	P23501	404 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	MGT1	P26188	188 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	CMK1	P27466	446 aa	Known RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	TPS2	P31688	896 aa	Known RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	NIP1	P32497	812 aa	Known RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	RRP1	P35178	278 aa	Predicted RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	OLA1	P38219	394 aa	Known RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	VHC1	P38329	1120 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	MSG5	P38590	489 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	NDE1	P40215	560 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	UTP18	P40362	594 aa	Predicted RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	NDC80	P40460	691 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	APT1	P49435	187 aa	Known RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	NNF2	P53253	936 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	GND2	P53319	492 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	UTP6	Q02354	440 aa	Known RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	DIG1	Q03063	452 aa	Known RBP	4.21	□□□□□ -1.74
RXT3	YDL076C	YET2	Q04210	160 aa		4.21	□□□□□ -1.74
RXT3	YDL076C	YPT1	P01123	206 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms