RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W SMC4Q12267 1418 aa1.99□□□□□ -2.09
USO1YDL058W YML133CQ03099 1374 aa1.99□□□□□ -2.09
USO1YDL058W YLL067CQ07888 1374 aa1.99□□□□□ -2.09
USO1YDL058W YLL066CQ99208 1374 aa1.99□□□□□ -2.09
USO1YDL058W COX2P00410 251 aa1.99□□□□□ -2.09
USO1YDL058W MES1P00958 751 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W RPL4AP10664 362 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W PDA1P16387 420 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W MET16P18408 261 aaPredicted RBP1.99□□□□□ -2.09
USO1YDL058W RPB5P20434 215 aa1.99□□□□□ -2.09
USO1YDL058W MSN1P22148 382 aa1.99□□□□□ -2.09
USO1YDL058W RFA1P22336 621 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W SGV1P23293 657 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W PHO3P24031 467 aa1.99□□□□□ -2.09
USO1YDL058W SPS22P25380 463 aa1.99□□□□□ -2.09
USO1YDL058W ARO2P28777 376 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W IDH1P28834 360 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
USO1YDL058W TYE7P33122 291 aaPredicted RBP1.99□□□□□ -2.09
USO1YDL058W LAS1P36146 502 aaPredicted RBP1.99□□□□□ -2.09
USO1YDL058W GLY1P37303 387 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W YBR063CP38083 404 aa1.99□□□□□ -2.09
USO1YDL058W RFC5P38251 354 aa1.99□□□□□ -2.09
USO1YDL058W SOH1P38633 127 aa1.99□□□□□ -2.09
USO1YDL058W ARP1P38696 384 aa1.99□□□□□ -2.09
USO1YDL058W TDA3P38758 523 aa1.99□□□□□ -2.09
USO1YDL058W YJL193WP39542 402 aa1.99□□□□□ -2.09
USO1YDL058W RRG9P40156 214 aa1.99□□□□□ -2.09
USO1YDL058W IDP2P41939 412 aa1.99□□□□□ -2.09
USO1YDL058W YFL054CP43549 646 aa1.99□□□□□ -2.09
USO1YDL058W TOS3P43637 560 aa1.99□□□□□ -2.09
USO1YDL058W RPL4BP49626 362 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W YGL242CP53066 181 aa1.99□□□□□ -2.09
USO1YDL058W ARI1P53111 347 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W POP6P53218 158 aa1.99□□□□□ -2.09
USO1YDL058W ALG11P53954 548 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W OSH6Q02201 448 aa1.99□□□□□ -2.09
USO1YDL058W TRM82Q03774 444 aa1.99□□□□□ -2.09
USO1YDL058W GMC1Q04399 608 aa1.99□□□□□ -2.09
USO1YDL058W YLR030WQ07967 263 aa1.99□□□□□ -2.09
USO1YDL058W LDB19Q12502 818 aa1.99□□□□□ -2.09
USO1YDL058W MHF2Q3E829 80 aa1.99□□□□□ -2.09
USO1YDL058W ADR1P07248 1323 aa1.99□□□□□ -2.09
USO1YDL058W CLN3P13365 580 aa1.99□□□□□ -2.09
USO1YDL058W SAM35P14693 329 aa1.99□□□□□ -2.09
USO1YDL058W MTF1P14908 341 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W SWI4P25302 1093 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W CPS1P27614 576 aa1.99□□□□□ -2.09
USO1YDL058W SUA5P32579 426 aa1.99□□□□□ -2.09
USO1YDL058W RGT1P32862 1170 aa1.99□□□□□ -2.09
USO1YDL058W APE3P37302 537 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W TDA11P38854 504 aa1.99□□□□□ -2.09
USO1YDL058W STT3P39007 718 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W SKI6P46948 246 aaPredicted RBP1.99□□□□□ -2.09
USO1YDL058W YHC3P47040 408 aa1.99□□□□□ -2.09
USO1YDL058W STE24P47154 453 aa1.99□□□□□ -2.09
USO1YDL058W IBA57P47158 497 aa1.99□□□□□ -2.09
USO1YDL058W BRR6P53062 197 aa1.99□□□□□ -2.09
USO1YDL058W MET13P53128 600 aa1.99□□□□□ -2.09
USO1YDL058W ERG26P53199 349 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W COS1P53822 381 aa1.99□□□□□ -2.09
USO1YDL058W VAC7P53950 1165 aa1.99□□□□□ -2.09
USO1YDL058W HED1Q03937 162 aa1.99□□□□□ -2.09
USO1YDL058W ARP10Q04549 284 aa1.99□□□□□ -2.09
USO1YDL058W SSL1Q04673 461 aaPredicted RBP1.99□□□□□ -2.09
USO1YDL058W YMR310CQ04867 317 aaPredicted RBP1.99□□□□□ -2.09
USO1YDL058W ECI1Q05871 280 aa1.99□□□□□ -2.09
USO1YDL058W SKG3Q06315 1026 aa1.99□□□□□ -2.09
USO1YDL058W TAF10Q12030 206 aa1.99□□□□□ -2.09
USO1YDL058W THP3Q12049 470 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W DIN7Q12086 430 aa1.99□□□□□ -2.09
USO1YDL058W GET3Q12154 354 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W CDC19P00549 500 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W CHL1P22516 861 aaPredicted RBP1.99□□□□□ -2.09
USO1YDL058W NPP1P25353 742 aa1.99□□□□□ -2.09
USO1YDL058W PEX3P28795 441 aa1.99□□□□□ -2.09
USO1YDL058W BMH1P29311 267 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W SEC1P30619 724 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W KNS1P32350 737 aaPredicted RBP1.99□□□□□ -2.09
USO1YDL058W SFB3P38810 929 aa1.99□□□□□ -2.09
USO1YDL058W YHR210CP38893 341 aa1.99□□□□□ -2.09
USO1YDL058W VHS2P40463 436 aa1.99□□□□□ -2.09
USO1YDL058W MPS3P47069 682 aa1.99□□□□□ -2.09
USO1YDL058W HOC1P47124 396 aa1.99□□□□□ -2.09
USO1YDL058W AMA1P50082 593 aa1.99□□□□□ -2.09
USO1YDL058W YNL010WP53981 241 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W YSA1Q01976 231 aa1.99□□□□□ -2.09
USO1YDL058W EBS1Q03466 884 aaKnown RBP1.99□□□□□ -2.09
USO1YDL058W ECM11Q04110 302 aa1.99□□□□□ -2.09
USO1YDL058W YET2Q04210 160 aa1.99□□□□□ -2.09
USO1YDL058W YDR222WQ04925 415 aa1.99□□□□□ -2.09
USO1YDL058W CDA1Q06702 301 aa1.99□□□□□ -2.09
USO1YDL058W YAP7Q08182 245 aa1.99□□□□□ -2.09
USO1YDL058W YNG1Q08465 219 aa1.99□□□□□ -2.09
USO1YDL058W PEX27Q08580 376 aa1.99□□□□□ -2.09
USO1YDL058W FEX2Q08991 375 aa1.99□□□□□ -2.09
USO1YDL058W NDJ1Q12366 352 aa1.99□□□□□ -2.09
USO1YDL058W DIF1O13577 133 aa1.99□□□□□ -2.09
USO1YDL058W YBR085C-AO43137 85 aa1.99□□□□□ -2.09
USO1YDL058W NAM2P11325 894 aa1.99□□□□□ -2.09
USO1YDL058W STE12P13574 688 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms