RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A PIB2P53191 635 aa3.12□□□□□ -1.91
RIM1YCR028C-A SLG1P54867 378 aa3.12□□□□□ -1.91
RIM1YCR028C-A SML1Q04964 104 aa3.12□□□□□ -1.91
RIM1YCR028C-A MRD1Q06106 887 aaKnown RBP3.12□□□□□ -1.91
RIM1YCR028C-A ATG29Q12092 213 aa3.12□□□□□ -1.91
RIM1YCR028C-A RUD3Q12234 484 aaKnown RBP3.12□□□□□ -1.91
RIM1YCR028C-A PGA3Q12746 312 aaKnown RBP3.12□□□□□ -1.91
RIM1YCR028C-A NBL1Q3E7Y6 73 aa3.12□□□□□ -1.91
RIM1YCR028C-A YKL068W-AQ3E826 78 aa3.12□□□□□ -1.91
RIM1YCR028C-A MET17P06106 444 aa3.11□□□□□ -1.91
RIM1YCR028C-A RPO26P20435 155 aa3.11□□□□□ -1.91
RIM1YCR028C-A PUT3P25502 979 aaPredicted RBP3.11□□□□□ -1.91
RIM1YCR028C-A BMH2P34730 273 aaKnown RBP3.11□□□□□ -1.91
RIM1YCR028C-A BYE1P36106 594 aa3.11□□□□□ -1.91
RIM1YCR028C-A PCH2P38126 564 aa3.11□□□□□ -1.91
RIM1YCR028C-A GDT1P38301 280 aaPredicted RBP3.11□□□□□ -1.91
RIM1YCR028C-A PCA1P38360 1216 aa3.11□□□□□ -1.91
RIM1YCR028C-A NDE1P40215 560 aa3.11□□□□□ -1.91
RIM1YCR028C-A MET18P40469 1032 aa3.11□□□□□ -1.91
RIM1YCR028C-A EPL1P43572 832 aa3.11□□□□□ -1.91
RIM1YCR028C-A CUE3P53137 624 aaKnown RBP3.11□□□□□ -1.91
RIM1YCR028C-A YGL108CP53139 140 aa3.11□□□□□ -1.91
RIM1YCR028C-A PIR3Q03180 325 aa3.11□□□□□ -1.91
RIM1YCR028C-A RRB1Q04225 511 aaKnown RBP3.11□□□□□ -1.91
RIM1YCR028C-A HNT3Q08702 217 aa3.11□□□□□ -1.91
RIM1YCR028C-A YLL056CQ12177 298 aa3.11□□□□□ -1.91
RIM1YCR028C-A SAC3P46674 1301 aa3.11□□□□□ -1.91
RIM1YCR028C-A CDC37P06101 506 aaKnown RBP3.1□□□□□ -1.91
RIM1YCR028C-A LEU4P06208 619 aaKnown RBP3.1□□□□□ -1.91
RIM1YCR028C-A PMR1P13586 950 aa3.1□□□□□ -1.91
RIM1YCR028C-A CPR1P14832 162 aaKnown RBP3.1□□□□□ -1.91
RIM1YCR028C-A CKA1P15790 372 aa3.1□□□□□ -1.91
RIM1YCR028C-A RAD14P28519 371 aa3.1□□□□□ -1.91
RIM1YCR028C-A BMH1P29311 267 aaKnown RBP3.1□□□□□ -1.91
RIM1YCR028C-A AFG1P32317 509 aa3.1□□□□□ -1.91
RIM1YCR028C-A SRB4P32569 687 aa3.1□□□□□ -1.91
RIM1YCR028C-A CBP4P37267 147 aa3.1□□□□□ -1.91
RIM1YCR028C-A THI2P38141 450 aa3.1□□□□□ -1.91
RIM1YCR028C-A SPT8P38915 602 aa3.1□□□□□ -1.91
RIM1YCR028C-A ISC1P40015 477 aaKnown RBP3.1□□□□□ -1.91
RIM1YCR028C-A FAU1P40099 211 aa3.1□□□□□ -1.91
RIM1YCR028C-A YMR147WP40218 223 aaKnown RBP3.1□□□□□ -1.91
RIM1YCR028C-A HXT14P42833 540 aa3.1□□□□□ -1.91
RIM1YCR028C-A AVT4P50944 713 aa3.1□□□□□ -1.91
RIM1YCR028C-A RTC4P53850 401 aa3.1□□□□□ -1.91
RIM1YCR028C-A JJJ1P53863 590 aa3.1□□□□□ -1.91
RIM1YCR028C-A MRPL19P53875 158 aa3.1□□□□□ -1.91
RIM1YCR028C-A YMR102CQ03177 834 aa3.1□□□□□ -1.91
RIM1YCR028C-A YLR287CQ05881 355 aa3.1□□□□□ -1.91
RIM1YCR028C-A TSR2Q06672 205 aaKnown RBP3.1□□□□□ -1.91
RIM1YCR028C-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
RIM1YCR028C-A CEX1Q12453 761 aa3.1□□□□□ -1.91
RIM1YCR028C-A YCL021W-AQ96VH3 125 aa3.1□□□□□ -1.91
RIM1YCR028C-A CDC8P00572 216 aa3.09□□□□□ -1.91
RIM1YCR028C-A ATP10P18496 279 aa3.09□□□□□ -1.91
RIM1YCR028C-A IDH2P28241 369 aaKnown RBP3.09□□□□□ -1.91
RIM1YCR028C-A NDI1P32340 513 aa3.09□□□□□ -1.91
RIM1YCR028C-A GLC7P32598 312 aaKnown RBP3.09□□□□□ -1.91
RIM1YCR028C-A MRP4P32902 394 aa3.09□□□□□ -1.91
RIM1YCR028C-A SEC66P33754 206 aa3.09□□□□□ -1.91
RIM1YCR028C-A YBR139WP38109 508 aa3.09□□□□□ -1.91
RIM1YCR028C-A AVT5P38176 459 aa3.09□□□□□ -1.91
RIM1YCR028C-A MED8P38304 223 aa3.09□□□□□ -1.91
RIM1YCR028C-A CTM1P38818 585 aa3.09□□□□□ -1.91
RIM1YCR028C-A ESL1P40456 1118 aa3.09□□□□□ -1.91
RIM1YCR028C-A YGR149WP48236 432 aa3.09□□□□□ -1.91
RIM1YCR028C-A MSO1P53604 210 aaKnown RBP3.09□□□□□ -1.91
RIM1YCR028C-A VAC14Q06708 880 aa3.09□□□□□ -1.91
RIM1YCR028C-A RSA1Q08932 381 aa3.09□□□□□ -1.91
RIM1YCR028C-A RRP5Q05022 1729 aaKnown RBP3.08□□□□□ -1.92
RIM1YCR028C-A RHO2P06781 192 aa3.08□□□□□ -1.92
RIM1YCR028C-A CKI1P20485 582 aa3.08□□□□□ -1.92
RIM1YCR028C-A SPB1P25582 841 aaPredicted RBP3.08□□□□□ -1.92
RIM1YCR028C-A YCR100CP25606 316 aa3.08□□□□□ -1.92
RIM1YCR028C-A UTP9P38882 575 aaKnown RBP3.08□□□□□ -1.92
RIM1YCR028C-A SMF1P38925 575 aa3.08□□□□□ -1.92
RIM1YCR028C-A SMC2P38989 1170 aaKnown RBP3.08□□□□□ -1.92
RIM1YCR028C-A NAB3P38996 802 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
RIM1YCR028C-A SEC9P40357 651 aa3.08□□□□□ -1.92
RIM1YCR028C-A IRC6P43615 237 aa3.08□□□□□ -1.92
RIM1YCR028C-A OGG1P53397 376 aaPredicted RBP3.08□□□□□ -1.92
RIM1YCR028C-A ARK1P53974 638 aa3.08□□□□□ -1.92
RIM1YCR028C-A GYL1Q04322 720 aa3.08□□□□□ -1.92
RIM1YCR028C-A RQC1Q05468 723 aaKnown RBP3.08□□□□□ -1.92
RIM1YCR028C-A MMR1Q06324 491 aa3.08□□□□□ -1.92
RIM1YCR028C-A GRX6Q12438 231 aa3.08□□□□□ -1.92
RIM1YCR028C-A POM152P39685 1337 aa3.08□□□□□ -1.92
RIM1YCR028C-A HIS4P00815 799 aaKnown RBP3.07□□□□□ -1.92
RIM1YCR028C-A RNA14P25298 677 aaKnown RBP3.07□□□□□ -1.92
RIM1YCR028C-A YOX1P34161 385 aa3.07□□□□□ -1.92
RIM1YCR028C-A YET1P35723 206 aa3.07□□□□□ -1.92
RIM1YCR028C-A OLA1P38219 394 aaKnown RBP3.07□□□□□ -1.92
RIM1YCR028C-A RXT2P38255 430 aa3.07□□□□□ -1.92
RIM1YCR028C-A RIO2P40160 425 aaKnown RBP3.07□□□□□ -1.92
RIM1YCR028C-A MKT1P40850 830 aaKnown RBP3.07□□□□□ -1.92
RIM1YCR028C-A YFL067WP43537 175 aa3.07□□□□□ -1.92
RIM1YCR028C-A YPI1P43587 155 aa3.07□□□□□ -1.92
RIM1YCR028C-A CTK3P46963 296 aaPredicted RBP3.07□□□□□ -1.92
RIM1YCR028C-A RMD9P53140 646 aaKnown RBP3.07□□□□□ -1.92
RIM1YCR028C-A CAF40P53829 373 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms