RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	ROG1	P53118	685 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	PRM1	P53835	661 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	PDR16	P53860	351 aa	Known RBP	4.08	□□□□□ -1.76
SHE3	YBR130C	SYO1	Q07395	620 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	DSE3	Q08729	430 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	BSC1	Q12140	328 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	PSY3	Q12318	242 aa		4.08	□□□□□ -1.76
SHE3	YBR130C	ARG4	P04076	463 aa	Predicted RBP	4.07	□□□□□ -1.76
SHE3	YBR130C	DAP2	P18962	818 aa		4.07	□□□□□ -1.76
SHE3	YBR130C	UBA1	P22515	1024 aa	Known RBP	4.07	□□□□□ -1.76
SHE3	YBR130C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SHE3	YBR130C	PCA1	P38360	1216 aa		4.07	□□□□□ -1.76
SHE3	YBR130C	INM1	P38710	295 aa		4.07	□□□□□ -1.76
SHE3	YBR130C	RRP4	P38792	359 aa	Known RBP	4.07	□□□□□ -1.76
SHE3	YBR130C	MNL1	P38888	796 aa		4.07	□□□□□ -1.76
SHE3	YBR130C	LYS1	P38998	373 aa	RIP-Chip data	4.07	□□□□□ -1.76	not detected
SHE3	YBR130C	YAL037W	P39728	267 aa		4.07	□□□□□ -1.76
SHE3	YBR130C	YIP5	P53108	310 aa		4.07	□□□□□ -1.76
SHE3	YBR130C	MMT1	Q03218	510 aa		4.07	□□□□□ -1.76
SHE3	YBR130C	SPH1	Q06160	661 aa		4.07	□□□□□ -1.76
SHE3	YBR130C	IPK1	Q06667	281 aa		4.07	□□□□□ -1.76
SHE3	YBR130C	ILV5	P06168	395 aa	Known RBP	4.06	□□□□□ -1.76
SHE3	YBR130C	DST1	P07273	309 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	YCR100C	P25606	316 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	YCR041W	P37265	110 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	YBR056W	P38081	501 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	YER079W	P40052	210 aa	Known RBP	4.06	□□□□□ -1.76
SHE3	YBR130C	DIM1	P41819	318 aa	Known RBP	4.06	□□□□□ -1.76
SHE3	YBR130C	GUF1	P46943	645 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	GPI8	P49018	411 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	RBA50	Q04418	439 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	MLH2	Q07980	695 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	AAD15	Q08361	143 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	GEP3	Q08622	556 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	RTC5	Q12108	567 aa	Known RBP	4.06	□□□□□ -1.76
SHE3	YBR130C	ATG34	Q12292	412 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	RKM5	Q12367	367 aa		4.06	□□□□□ -1.76
SHE3	YBR130C	AMD1	P15274	810 aa	Known RBP	4.05	□□□□□ -1.76
SHE3	YBR130C	YCP4	P25349	247 aa	Known RBP	4.05	□□□□□ -1.76
SHE3	YBR130C	RDS1	P25611	832 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	PPZ1	P26570	692 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	SRB2	P34162	210 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	ASK1	P35734	292 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	VPS52	P39904	641 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	YPS6	P40583	537 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	MDE1	P47095	244 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	MPS2	P53159	387 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	YNR068C	P53754	272 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	YNL143C	P53908	130 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	GPI15	P53961	229 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	KTR5	P53966	522 aa	Predicted RBP	4.05	□□□□□ -1.76
SHE3	YBR130C	ODC1	Q03028	310 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	RSN1	Q03516	953 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	BET5	Q03630	159 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	URH1	Q04179	340 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	SKI7	Q08491	747 aa	Predicted RBP	4.05	□□□□□ -1.76
SHE3	YBR130C	AFT2	Q08957	416 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	CSR2	Q12734	1121 aa		4.05	□□□□□ -1.76
SHE3	YBR130C	COX3	P00420	269 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	NFT1	P0CE68	1218 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	SPO12	P17123	173 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	SLM5	P25345	492 aa	Known RBP	4.04	□□□□□ -1.76
SHE3	YBR130C	LSB5	P25369	354 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	PTR2	P32901	601 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	SIP2	P34164	415 aa	Known RBP	4.04	□□□□□ -1.76
SHE3	YBR130C	SPT10	P35208	640 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	ATP3	P38077	311 aa	Known RBP	4.04	□□□□□ -1.76
SHE3	YBR130C	PES4	P39684	611 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	MKT1	P40850	830 aa	Known RBP	4.04	□□□□□ -1.76
SHE3	YBR130C	GWT1	P47026	490 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	IKS1	P47042	667 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	SHE4	P51534	789 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	RTT102	P53330	157 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	SCW4	P53334	386 aa	Known RBP	4.04	□□□□□ -1.76
SHE3	YBR130C	HST1	P53685	503 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	MRP51	Q02950	344 aa		4.04	□□□□□ -1.76
SHE3	YBR130C	PML1	Q07930	204 aa	Predicted RBP	4.04	□□□□□ -1.76
SHE3	YBR130C	PKH2	Q12236	1081 aa	Known RBP	4.04	□□□□□ -1.76
SHE3	YBR130C	MTF1	P14908	341 aa	Known RBP	4.03	□□□□□ -1.76
SHE3	YBR130C	GLN3	P18494	730 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	CTR86	P25355	563 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	QDR3	P38227	689 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	BZZ1	P38822	633 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	GPI16	P38875	610 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	MMF1	P40185	145 aa	Known RBP	4.03	□□□□□ -1.76
SHE3	YBR130C	NAS2	P40555	220 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	ARP5	P53946	755 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	YMR087W	Q04299	284 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	FMP42	Q04991	504 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	NOP6	Q07623	225 aa	Known RBP	4.03	□□□□□ -1.76
SHE3	YBR130C	MDY2	Q12285	212 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	CEX1	Q12453	761 aa		4.03	□□□□□ -1.76
SHE3	YBR130C	CHS1	P08004	1131 aa		4.02	□□□□□ -1.77
SHE3	YBR130C	SCH9	P11792	824 aa	Known RBP	4.02	□□□□□ -1.77
SHE3	YBR130C	PRP16	P15938	1071 aa	Predicted RBP	4.02	□□□□□ -1.77
SHE3	YBR130C	YSC83	P32792	385 aa		4.02	□□□□□ -1.77
SHE3	YBR130C	ATO2	P32907	282 aa		4.02	□□□□□ -1.77
SHE3	YBR130C	DOA1	P36037	715 aa		4.02	□□□□□ -1.77
SHE3	YBR130C	TIF5	P38431	405 aa	Known RBP	4.02	□□□□□ -1.77
SHE3	YBR130C	RRF1	P38771	230 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms