RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C HSP82P02829 709 aaKnown RBP4.3□□□□□ -1.72
YPK3YBR028C SAM1P10659 382 aaKnown RBP4.3□□□□□ -1.72
YPK3YBR028C PRP16P15938 1071 aaPredicted RBP4.3□□□□□ -1.72
YPK3YBR028C SAM2P19358 384 aaKnown RBP4.3□□□□□ -1.72
YPK3YBR028C RRP7P25368 297 aaPredicted RBP4.3□□□□□ -1.72
YPK3YBR028C TIP1P27654 210 aaPredicted RBP4.3□□□□□ -1.72
YPK3YBR028C PRO3P32263 286 aaKnown RBP4.3□□□□□ -1.72
YPK3YBR028C MDL1P33310 695 aa4.3□□□□□ -1.72
YPK3YBR028C FAD1P38913 306 aa4.3□□□□□ -1.72
YPK3YBR028C LYS1P38998 373 aaRIP-Chip data4.3□□□□□ -1.72not detected
YPK3YBR028C KRE9P39005 276 aa4.3□□□□□ -1.72
YPK3YBR028C YAL037WP39728 267 aa4.3□□□□□ -1.72
YPK3YBR028C JEM1P40358 645 aa4.3□□□□□ -1.72
YPK3YBR028C YJL055WP47044 245 aa4.3□□□□□ -1.72
YPK3YBR028C HMS2P47175 358 aa4.3□□□□□ -1.72
YPK3YBR028C GPI15P53961 229 aa4.3□□□□□ -1.72
YPK3YBR028C MRP51Q02950 344 aa4.3□□□□□ -1.72
YPK3YBR028C SNT309Q06091 175 aaPredicted RBP4.3□□□□□ -1.72
YPK3YBR028C RMD5Q12508 421 aa4.3□□□□□ -1.72
YPK3YBR028C SWH1P35845 1188 aa4.29□□□□□ -1.72
YPK3YBR028C CAF40P53829 373 aa4.29□□□□□ -1.72
YPK3YBR028C ERO1Q03103 563 aa4.29□□□□□ -1.72
YPK3YBR028C PPT2Q12036 173 aa4.29□□□□□ -1.72
YPK3YBR028C RPL1AP0CX43 217 aaKnown RBP4.28□□□□□ -1.72
YPK3YBR028C RPL1BP0CX44 217 aaKnown RBP4.28□□□□□ -1.72
YPK3YBR028C MST28P39552 234 aa4.28□□□□□ -1.72
YPK3YBR028C GDI1P39958 451 aaKnown RBP4.28□□□□□ -1.72
YPK3YBR028C PHB2P50085 310 aa4.28□□□□□ -1.72
YPK3YBR028C YNR048WP53740 393 aa4.28□□□□□ -1.72
YPK3YBR028C RCF1Q03713 159 aa4.28□□□□□ -1.72
YPK3YBR028C TIM18Q08749 192 aa4.28□□□□□ -1.72
YPK3YBR028C LSB5P25369 354 aa4.27□□□□□ -1.73
YPK3YBR028C SCS3P53012 380 aa4.27□□□□□ -1.73
YPK3YBR028C RPN9Q04062 393 aaKnown RBP4.27□□□□□ -1.73
YPK3YBR028C SGT1Q08446 395 aa4.27□□□□□ -1.73
YPK3YBR028C SKI7Q08491 747 aaPredicted RBP4.27□□□□□ -1.73
YPK3YBR028C YPL199CQ08954 240 aa4.27□□□□□ -1.73
YPK3YBR028C PKH2Q12236 1081 aaKnown RBP4.27□□□□□ -1.73
YPK3YBR028C IMA3P0CW40 589 aa4.27□□□□□ -1.73
YPK3YBR028C IMA4P0CW41 589 aa4.27□□□□□ -1.73
YPK3YBR028C PMR1P13586 950 aa4.27□□□□□ -1.73
YPK3YBR028C CPR1P14832 162 aaKnown RBP4.27□□□□□ -1.73
YPK3YBR028C BLI1P35727 113 aa4.27□□□□□ -1.73
YPK3YBR028C SEC28P40509 296 aaKnown RBP4.27□□□□□ -1.73
YPK3YBR028C YPS6P40583 537 aa4.27□□□□□ -1.73
YPK3YBR028C IDP2P41939 412 aa4.27□□□□□ -1.73
YPK3YBR028C MSO1P53604 210 aaKnown RBP4.27□□□□□ -1.73
YPK3YBR028C REX4Q08237 289 aa4.27□□□□□ -1.73
YPK3YBR028C IMA2Q08295 589 aa4.27□□□□□ -1.73
YPK3YBR028C THP3Q12049 470 aaKnown RBP4.27□□□□□ -1.73
YPK3YBR028C YLL056CQ12177 298 aa4.27□□□□□ -1.73
YPK3YBR028C SPO12P17123 173 aa4.26□□□□□ -1.73
YPK3YBR028C YUR1P26725 428 aa4.26□□□□□ -1.73
YPK3YBR028C RGT1P32862 1170 aa4.26□□□□□ -1.73
YPK3YBR028C RXT2P38255 430 aa4.26□□□□□ -1.73
YPK3YBR028C TIF5P38431 405 aaKnown RBP4.26□□□□□ -1.73
YPK3YBR028C MKT1P40850 830 aaKnown RBP4.26□□□□□ -1.73
YPK3YBR028C LAM5P43560 674 aa4.26□□□□□ -1.73
YPK3YBR028C RSN1Q03516 953 aa4.26□□□□□ -1.73
YPK3YBR028C PRP42Q03776 544 aaKnown RBP4.26□□□□□ -1.73
YPK3YBR028C YCL021W-AQ96VH3 125 aa4.26□□□□□ -1.73
YPK3YBR028C RAD61Q99359 647 aa4.26□□□□□ -1.73
YPK3YBR028C TEF1P02994 458 aaKnown RBP4.25□□□□□ -1.73
YPK3YBR028C ARG4P04076 463 aaPredicted RBP4.25□□□□□ -1.73
YPK3YBR028C NAT1P12945 854 aaKnown RBP4.25□□□□□ -1.73
YPK3YBR028C RIM1P32445 135 aaKnown RBP4.25□□□□□ -1.73
YPK3YBR028C DPH2P32461 534 aa4.25□□□□□ -1.73
YPK3YBR028C MRP4P32902 394 aa4.25□□□□□ -1.73
YPK3YBR028C NAT2P37293 288 aa4.25□□□□□ -1.73
YPK3YBR028C MIX23P38162 196 aa4.25□□□□□ -1.73
YPK3YBR028C APE4P38821 490 aa4.25□□□□□ -1.73
YPK3YBR028C STN1P38960 494 aa4.25□□□□□ -1.73
YPK3YBR028C GAT2P40209 560 aa4.25□□□□□ -1.73
YPK3YBR028C OST1P41543 476 aaKnown RBP4.25□□□□□ -1.73
YPK3YBR028C SSN8P47821 323 aa4.25□□□□□ -1.73
YPK3YBR028C RHO5P53879 331 aaKnown RBP4.25□□□□□ -1.73
YPK3YBR028C URH1Q04179 340 aa4.25□□□□□ -1.73
YPK3YBR028C YDR341CQ05506 607 aaKnown RBP4.25□□□□□ -1.73
YPK3YBR028C HNT3Q08702 217 aa4.25□□□□□ -1.73
YPK3YBR028C MUM3Q08750 479 aa4.25□□□□□ -1.73
YPK3YBR028C BUG1Q12191 341 aa4.25□□□□□ -1.73
YPK3YBR028C ATG34Q12292 412 aa4.25□□□□□ -1.73
YPK3YBR028C RRP12Q12754 1228 aaKnown RBP4.25□□□□□ -1.73
YPK3YBR028C PUP2P32379 260 aa4.24□□□□□ -1.73
YPK3YBR028C YBR137WP38276 179 aa4.24□□□□□ -1.73
YPK3YBR028C GPI16P38875 610 aa4.24□□□□□ -1.73
YPK3YBR028C PEX25Q02969 394 aa4.24□□□□□ -1.73
YPK3YBR028C BET5Q03630 159 aa4.24□□□□□ -1.73
YPK3YBR028C RTT103Q05543 409 aa4.24□□□□□ -1.73
YPK3YBR028C SRL2Q12020 392 aa4.24□□□□□ -1.73
YPK3YBR028C RAD57P25301 460 aa4.23□□□□□ -1.73
YPK3YBR028C SWI3P32591 825 aa4.23□□□□□ -1.73
YPK3YBR028C OLA1P38219 394 aaKnown RBP4.23□□□□□ -1.73
YPK3YBR028C STP2P38704 541 aa4.23□□□□□ -1.73
YPK3YBR028C FAA2P39518 744 aa4.23□□□□□ -1.73
YPK3YBR028C CHS6P40955 746 aa4.23□□□□□ -1.73
YPK3YBR028C GOR1P53839 350 aa4.23□□□□□ -1.73
YPK3YBR028C HXT11P54862 567 aa4.23□□□□□ -1.73
YPK3YBR028C PHO2P07269 559 aa4.23□□□□□ -1.73
YPK3YBR028C HEM15P16622 393 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms