RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W PRE9P23638 258 aaKnown RBP5.47□□□□□ -1.53
SHP1YBL058W DPB3P27344 201 aa5.47□□□□□ -1.53
SHP1YBL058W YEL043WP32618 956 aa5.47□□□□□ -1.53
SHP1YBL058W PTH2P34222 208 aa5.47□□□□□ -1.53
SHP1YBL058W MUD2P36084 527 aaKnown RBP5.47□□□□□ -1.53
SHP1YBL058W LAS1P36146 502 aaPredicted RBP5.47□□□□□ -1.53
SHP1YBL058W BNA4P38169 460 aa5.47□□□□□ -1.53
SHP1YBL058W BMT2P38278 337 aa5.47□□□□□ -1.53
SHP1YBL058W IFA38P38286 347 aa5.47□□□□□ -1.53
SHP1YBL058W COA1P40452 197 aa5.47□□□□□ -1.53
SHP1YBL058W AXL1P40851 1208 aa5.47□□□□□ -1.53
SHP1YBL058W PMT4P46971 762 aa5.47□□□□□ -1.53
SHP1YBL058W BPL1P48445 690 aaPredicted RBP5.47□□□□□ -1.53
SHP1YBL058W LSC1P53598 329 aaKnown RBP5.47□□□□□ -1.53
SHP1YBL058W ATG4P53867 494 aa5.47□□□□□ -1.53
SHP1YBL058W SDH1Q00711 640 aa5.47□□□□□ -1.53
SHP1YBL058W REC102Q02721 264 aa5.47□□□□□ -1.53
SHP1YBL058W SHR3Q02774 210 aa5.47□□□□□ -1.53
SHP1YBL058W ATG21Q02887 496 aa5.47□□□□□ -1.53
SHP1YBL058W YPL109CQ02981 657 aa5.47□□□□□ -1.53
SHP1YBL058W VPS16Q03308 798 aa5.47□□□□□ -1.53
SHP1YBL058W YPR174CQ06616 221 aaPredicted RBP5.47□□□□□ -1.53
SHP1YBL058W APC9Q12107 265 aa5.47□□□□□ -1.53
SHP1YBL058W YLR049CQ12110 428 aa5.47□□□□□ -1.53
SHP1YBL058W Q0010Q9ZZX9 128 aa5.47□□□□□ -1.53
SHP1YBL058W TY2A-LR1P0C2J4 438 aa5.46□□□□□ -1.54
SHP1YBL058W TY2A-FP0CX61 438 aa5.46□□□□□ -1.54
SHP1YBL058W TY2A-GR2P0CX62 438 aa5.46□□□□□ -1.54
SHP1YBL058W ART10P18634 518 aaKnown RBP5.46□□□□□ -1.54
SHP1YBL058W TY2A-CP25383 438 aa5.46□□□□□ -1.54
SHP1YBL058W SPB1P25582 841 aaPredicted RBP5.46□□□□□ -1.54
SHP1YBL058W IDH2P28241 369 aaKnown RBP5.46□□□□□ -1.54
SHP1YBL058W PHO89P38361 574 aa5.46□□□□□ -1.54
SHP1YBL058W TAT2P38967 592 aa5.46□□□□□ -1.54
SHP1YBL058W RAD17P48581 401 aa5.46□□□□□ -1.54
SHP1YBL058W YGR053CP53234 283 aa5.46□□□□□ -1.54
SHP1YBL058W LSM3P57743 89 aaKnown RBP5.46□□□□□ -1.54
SHP1YBL058W YSA1Q01976 231 aa5.46□□□□□ -1.54
SHP1YBL058W YDR541CQ03049 344 aa5.46□□□□□ -1.54
SHP1YBL058W MSC1Q03104 513 aa5.46□□□□□ -1.54
SHP1YBL058W TY2A-DR2Q03483 438 aa5.46□□□□□ -1.54
SHP1YBL058W YMR265CQ03508 461 aaKnown RBP5.46□□□□□ -1.54
SHP1YBL058W RQC1Q05468 723 aaKnown RBP5.46□□□□□ -1.54
SHP1YBL058W SEC10Q06245 871 aa5.46□□□□□ -1.54
SHP1YBL058W MCH5Q08777 521 aa5.46□□□□□ -1.54
SHP1YBL058W NMD4Q12129 218 aa5.46□□□□□ -1.54
SHP1YBL058W TY2A-BQ12260 438 aa5.46□□□□□ -1.54
SHP1YBL058W YOR097CQ12274 175 aaPredicted RBP5.46□□□□□ -1.54
SHP1YBL058W COX17Q12287 69 aa5.46□□□□□ -1.54
SHP1YBL058W TY2A-OR2Q12293 438 aa5.46□□□□□ -1.54
SHP1YBL058W TY2A-DR1Q12392 438 aa5.46□□□□□ -1.54
SHP1YBL058W TY2A-OR1Q12439 438 aa5.46□□□□□ -1.54
SHP1YBL058W TY2A-DR3Q99303 438 aa5.46□□□□□ -1.54
SHP1YBL058W APN1P22936 367 aa5.45□□□□□ -1.54
SHP1YBL058W SBA1P28707 216 aaKnown RBP5.45□□□□□ -1.54
SHP1YBL058W NAB2P32505 525 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
SHP1YBL058W COX13P32799 129 aa5.45□□□□□ -1.54
SHP1YBL058W RPS1AP33442 255 aaKnown RBP5.45□□□□□ -1.54
SHP1YBL058W LHS1P36016 881 aa5.45□□□□□ -1.54
SHP1YBL058W AUR1P36107 401 aaPredicted RBP5.45□□□□□ -1.54
SHP1YBL058W OSH7P38755 437 aa5.45□□□□□ -1.54
SHP1YBL058W SPC97P38863 823 aa5.45□□□□□ -1.54
SHP1YBL058W MDV1P47025 714 aa5.45□□□□□ -1.54
SHP1YBL058W SEH1P53011 349 aaKnown RBP5.45□□□□□ -1.54
SHP1YBL058W YGR067CP53243 804 aa5.45□□□□□ -1.54
SHP1YBL058W YPL068CQ02749 293 aa5.45□□□□□ -1.54
SHP1YBL058W GAS3Q03655 524 aa5.45□□□□□ -1.54
SHP1YBL058W GPB1Q08886 897 aa5.45□□□□□ -1.54
SHP1YBL058W MLH3Q12083 715 aa5.45□□□□□ -1.54
SHP1YBL058W YCL012CQ8J0M4 134 aa5.45□□□□□ -1.54
SHP1YBL058W CDC8P00572 216 aa5.44□□□□□ -1.54
SHP1YBL058W STE7P06784 515 aa5.44□□□□□ -1.54
SHP1YBL058W ILV2P07342 687 aaKnown RBP5.44□□□□□ -1.54
SHP1YBL058W ARD1P07347 238 aaPredicted RBP5.44□□□□□ -1.54
SHP1YBL058W ADH4P10127 382 aa5.44□□□□□ -1.54
SHP1YBL058W KRE6P32486 720 aa5.44□□□□□ -1.54
SHP1YBL058W PTR2P32901 601 aa5.44□□□□□ -1.54
SHP1YBL058W DOA1P36037 715 aa5.44□□□□□ -1.54
SHP1YBL058W SPP381P38282 291 aaPredicted RBP5.44□□□□□ -1.54
SHP1YBL058W UTP9P38882 575 aaKnown RBP5.44□□□□□ -1.54
SHP1YBL058W REV7P38927 245 aa5.44□□□□□ -1.54
SHP1YBL058W YHB1P39676 399 aaKnown RBP5.44□□□□□ -1.54
SHP1YBL058W SMX2P40204 77 aaKnown RBP5.44□□□□□ -1.54
SHP1YBL058W TED1P40533 473 aa5.44□□□□□ -1.54
SHP1YBL058W YIL001WP40560 513 aa5.44□□□□□ -1.54
SHP1YBL058W FKH2P41813 862 aa5.44□□□□□ -1.54
SHP1YBL058W GCD10P41814 478 aa5.44□□□□□ -1.54
SHP1YBL058W MRPS18P42847 217 aa5.44□□□□□ -1.54
SHP1YBL058W MPS3P47069 682 aa5.44□□□□□ -1.54
SHP1YBL058W YJR154WP47181 346 aa5.44□□□□□ -1.54
SHP1YBL058W UPF3P48412 387 aaKnown RBP5.44□□□□□ -1.54
SHP1YBL058W PPT1P53043 513 aa5.44□□□□□ -1.54
SHP1YBL058W YNL140CP53910 189 aa5.44□□□□□ -1.54
SHP1YBL058W MET31Q03081 177 aa5.44□□□□□ -1.54
SHP1YBL058W YML131WQ03102 365 aa5.44□□□□□ -1.54
SHP1YBL058W RRB1Q04225 511 aaKnown RBP5.44□□□□□ -1.54
SHP1YBL058W BAG7Q12128 409 aa5.44□□□□□ -1.54
SHP1YBL058W YLL054CQ12244 843 aa5.44□□□□□ -1.54
SHP1YBL058W PRP46Q12417 451 aaPredicted RBP5.44□□□□□ -1.54
SHP1YBL058W RPS17AP02407 136 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms