RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 RNH1Q04740 348 aa8.34□□□□□ -1.07
LSR1LSR1 GRS2Q06817 618 aa8.34□□□□□ -1.07
LSR1LSR1 TGL5Q12043 749 aa8.34□□□□□ -1.07
LSR1LSR1 BMT6Q12291 365 aa8.34□□□□□ -1.07
LSR1LSR1 SWI5P08153 709 aa8.33□□□□□ -1.08
LSR1LSR1 FUM1P08417 488 aaKnown RBP8.33□□□□□ -1.08
LSR1LSR1 CLN2P20438 545 aa8.33□□□□□ -1.08
LSR1LSR1 GIT1P25346 518 aa8.33□□□□□ -1.08
LSR1LSR1 RSC6P25632 483 aa8.33□□□□□ -1.08
LSR1LSR1 HXT4P32467 576 aa8.33□□□□□ -1.08
LSR1LSR1 RTG1P32607 177 aa8.33□□□□□ -1.08
LSR1LSR1 SPO23P33757 523 aa8.33□□□□□ -1.08
LSR1LSR1 HXT6P39003 570 aaKnown RBP8.33□□□□□ -1.08
LSR1LSR1 HXT7P39004 570 aa8.33□□□□□ -1.08
LSR1LSR1 DUN1P39009 513 aa8.33□□□□□ -1.08
LSR1LSR1 YEL073CP39974 107 aa8.33□□□□□ -1.08
LSR1LSR1 HEM14P40012 539 aa8.33□□□□□ -1.08
LSR1LSR1 ISC1P40015 477 aaKnown RBP8.33□□□□□ -1.08
LSR1LSR1 IRC6P43615 237 aa8.33□□□□□ -1.08
LSR1LSR1 YJL043WP47053 257 aa8.33□□□□□ -1.08
LSR1LSR1 HOC1P47124 396 aa8.33□□□□□ -1.08
LSR1LSR1 EMC4P53073 190 aa8.33□□□□□ -1.08
LSR1LSR1 MPS2P53159 387 aa8.33□□□□□ -1.08
LSR1LSR1 NQM1P53228 333 aaPredicted RBP8.33□□□□□ -1.08
LSR1LSR1 CPR8P53728 308 aa8.33□□□□□ -1.08
LSR1LSR1 YNL181WP53878 407 aa8.33□□□□□ -1.08
LSR1LSR1 RRP45Q05636 305 aaKnown RBP8.33□□□□□ -1.08
LSR1LSR1 COS7Q07788 383 aa8.33□□□□□ -1.08
LSR1LSR1 RRT8Q08219 342 aa8.33□□□□□ -1.08
LSR1LSR1 REV1P12689 985 aa8.32□□□□□ -1.08
LSR1LSR1 PEX1P24004 1043 aa8.32□□□□□ -1.08
LSR1LSR1 ATP11P32453 318 aa8.32□□□□□ -1.08
LSR1LSR1 CAT2P32796 670 aaKnown RBP8.32□□□□□ -1.08
LSR1LSR1 GPX2P38143 162 aa8.32□□□□□ -1.08
LSR1LSR1 CEM1P39525 442 aa8.32□□□□□ -1.08
LSR1LSR1 MET12P46151 657 aa8.32□□□□□ -1.08
LSR1LSR1 YJR030CP47101 745 aa8.32□□□□□ -1.08
LSR1LSR1 YJR149WP47177 404 aa8.32□□□□□ -1.08
LSR1LSR1 RIM21P48565 533 aa8.32□□□□□ -1.08
LSR1LSR1 MDM34P53083 459 aa8.32□□□□□ -1.08
LSR1LSR1 YGR168CP53293 376 aa8.32□□□□□ -1.08
LSR1LSR1 YNL260CP53846 198 aa8.32□□□□□ -1.08
LSR1LSR1 NUP49Q02199 472 aa8.32□□□□□ -1.08
LSR1LSR1 YPL034WQ03083 165 aa8.32□□□□□ -1.08
LSR1LSR1 ABZ2Q03266 374 aa8.32□□□□□ -1.08
LSR1LSR1 FIN1Q03898 291 aa8.32□□□□□ -1.08
LSR1LSR1 YPR196WQ06595 470 aa8.32□□□□□ -1.08
LSR1LSR1 TRM8Q12009 286 aa8.32□□□□□ -1.08
LSR1LSR1 THP3Q12049 470 aaKnown RBP8.32□□□□□ -1.08
LSR1LSR1 YPR011CQ12251 326 aa8.32□□□□□ -1.08
LSR1LSR1 RBD2Q12270 262 aa8.32□□□□□ -1.08
LSR1LSR1 HSP42Q12329 375 aa8.32□□□□□ -1.08
LSR1LSR1 SLH1P53327 1967 aaKnown RBP8.31□□□□□ -1.08
LSR1LSR1 LAT1P12695 482 aaKnown RBP8.31□□□□□ -1.08
LSR1LSR1 STF2P16965 84 aa8.31□□□□□ -1.08
LSR1LSR1 SYP1P25623 870 aaKnown RBP8.31□□□□□ -1.08
LSR1LSR1 PTC6P25646 442 aa8.31□□□□□ -1.08
LSR1LSR1 PET112P33893 541 aa8.31□□□□□ -1.08
LSR1LSR1 SPF1P39986 1215 aaKnown RBP8.31□□□□□ -1.08
LSR1LSR1 SER3P40054 469 aa8.31□□□□□ -1.08
LSR1LSR1 SSU1P41930 458 aa8.31□□□□□ -1.08
LSR1LSR1 NNF1P47149 201 aa8.31□□□□□ -1.08
LSR1LSR1 YNL140CP53910 189 aa8.31□□□□□ -1.08
LSR1LSR1 YNL034WP53963 612 aa8.31□□□□□ -1.08
LSR1LSR1 YMD8Q03697 442 aa8.31□□□□□ -1.08
LSR1LSR1 YPS7Q06325 596 aa8.31□□□□□ -1.08
LSR1LSR1 SYO1Q07395 620 aa8.31□□□□□ -1.08
LSR1LSR1 NMD4Q12129 218 aa8.31□□□□□ -1.08
LSR1LSR1 MNL2Q12205 849 aa8.31□□□□□ -1.08
LSR1LSR1 PNS1Q12412 539 aa8.31□□□□□ -1.08
LSR1LSR1 SRN2Q99176 213 aa8.31□□□□□ -1.08
LSR1LSR1 STT4P37297 1900 aa8.31□□□□□ -1.08
LSR1LSR1 ALG7P07286 448 aa8.3□□□□□ -1.08
LSR1LSR1 RPC40P07703 335 aaKnown RBP8.3□□□□□ -1.08
LSR1LSR1 RPL24BP24000 155 aaKnown RBP8.3□□□□□ -1.08
LSR1LSR1 ARO7P32178 256 aa8.3□□□□□ -1.08
LSR1LSR1 YKL063CP35725 167 aa8.3□□□□□ -1.08
LSR1LSR1 STP2P38704 541 aa8.3□□□□□ -1.08
LSR1LSR1 YHK8P38776 514 aa8.3□□□□□ -1.08
LSR1LSR1 LRP1P38801 184 aaKnown RBP8.3□□□□□ -1.08
LSR1LSR1 SOL3P38858 249 aa8.3□□□□□ -1.08
LSR1LSR1 PCL6P40038 420 aa8.3□□□□□ -1.08
LSR1LSR1 MMF1P40185 145 aaKnown RBP8.3□□□□□ -1.08
LSR1LSR1 QDR2P40474 542 aa8.3□□□□□ -1.08
LSR1LSR1 FAF1P40546 346 aaPredicted RBP8.3□□□□□ -1.08
LSR1LSR1 PAC11P40960 533 aa8.3□□□□□ -1.08
LSR1LSR1 STE24P47154 453 aa8.3□□□□□ -1.08
LSR1LSR1 MSE1P48525 536 aa8.3□□□□□ -1.08
LSR1LSR1 VEL1P53058 206 aa8.3□□□□□ -1.08
LSR1LSR1 SCW11P53189 542 aa8.3□□□□□ -1.08
LSR1LSR1 DUS1P53759 423 aaKnown RBP8.3□□□□□ -1.08
LSR1LSR1 MAK3Q03503 176 aa8.3□□□□□ -1.08
LSR1LSR1 SEG1Q04279 960 aa8.3□□□□□ -1.08
LSR1LSR1 EMI2Q04409 500 aaKnown RBP8.3□□□□□ -1.08
LSR1LSR1 ACF2Q12168 779 aa8.3□□□□□ -1.08
LSR1LSR1 NFI1Q12216 726 aa8.3□□□□□ -1.08
LSR1LSR1 RGT2Q12300 763 aa8.3□□□□□ -1.08
LSR1LSR1 BBP1Q12365 385 aa8.3□□□□□ -1.08
LSR1LSR1 TSC13Q99190 310 aa8.3□□□□□ -1.08
LSR1LSR1 EPT1P22140 391 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms