RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 CACNA1FO60840 1977 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 hCG_1642624A0A1W2PR95 340 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 SOWAHDA6NJG2 315 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 CCNT1O60563 726 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 RNF8O76064 485 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 TROVE2P10155 538 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 CRKLP46109 303 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 SCTRP47872 440 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 SEPT2Q15019 361 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 CFAP157Q5JU67 520 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 TRAPPC3LQ5T215 181 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 ZFYVE27Q5T4F4 411 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 RBM26Q5T8P6 1007 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 MAEAQ7L5Y9 396 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 WDR75Q8IWA0 830 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 REXO1Q8N1G1 1221 aaKnown RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 TMCO5AQ8N6Q1 288 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 MYCBPAPQ8TBZ2 947 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 STAMQ92783 540 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 AK8Q96MA6 479 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 LY9Q9HBG7 655 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 SPATA7Q9P0W8 599 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 PCDHGC5Q9Y5F6 944 aa6.19□□□□□ -1.42
SCARB2-218ENST00000639715 EPN1Q9Y6I3 576 aaPredicted RBP6.19□□□□□ -1.42
SCARB2-218ENST00000639715 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 TRAF5O00463 557 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 OPLAHO14841 1288 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 POTEJP0CG39 1038 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 CCND1P24385 295 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 NR5A1Q13285 461 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 FAM47AQ5JRC9 791 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 CLEC4GQ6UXB4 293 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 BRINP3Q76B58 766 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 CYB5R4Q7L1T6 521 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 IFT20Q8IY31 132 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 ELOA2Q8IYF1 753 aaPredicted RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 ARHGAP18Q8N392 663 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 CNBD1Q8NA66 436 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 TBC1D5Q92609 795 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 P3H4Q92791 437 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 NAF1Q96HR8 494 aaKnown RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 DHTKD1Q96HY7 919 aaPredicted RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 NR1H4Q96RI1 486 aaPredicted RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 AGXT2Q9BYV1 514 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 RWDD2AQ9UIY3 292 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 TAF6LQ9Y6J9 622 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 PNPLA7Q6ZV29 1317 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 GNPATO15228 680 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 FAM107AO95990 144 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 ADCY7P51828 1080 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 TNNC1P63316 161 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 MRPS25P82663 173 aaKnown RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 APBA1Q02410 837 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 ZNF658Q5TYW1 1059 aaPredicted RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 GET4Q7L5D6 327 aaPredicted RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 CYFIP2Q96F07 1278 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 NACA2Q9H009 215 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 TFCP2L1Q9NZI6 479 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 LARSQ9P2J5 1176 aaKnown RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 FRMD4BQ9Y2L6 1034 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 PCDHB6Q9Y5E3 794 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 PCDHGA4Q9Y5G9 962 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 PRKAB2O43741 272 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 CTDNEP1O95476 244 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 OR52Z1P0C646 297 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 MDH1P40925 334 aaKnown RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 TXKP42681 527 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 MAGEA1P43355 309 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 SERPINB4P48594 390 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 EPHB4P54760 987 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 NKX1-1Q15270 411 aaPredicted RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 HLFQ16534 295 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 PTGISQ16647 500 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 SLC9C1Q4G0N8 1177 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 OLFML2BQ68BL8 750 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 ZNF653Q96CK0 615 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 RBM17Q96I25 401 aaKnown RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 RNPC3Q96LT9 517 aaKnown RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 NOX5Q96PH1 765 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 PSMB7Q99436 277 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 STIM2Q9P246 746 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 TUBE1Q9UJT0 475 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 ATRNO75882 1429 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 MACROD2A1Z1Q3 448 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 CFAP73A6NFT4 308 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 TMEM232C9JQI7 657 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 RASSF9O75901 435 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 GNA14O95837 355 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 SKIP12755 728 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 CASP14P31944 242 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 FNTAP49354 379 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 AARSP49588 968 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 INHBEP58166 350 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 ZBTB17Q13105 803 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 CALCRLQ16602 461 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 HAUS3Q68CZ6 603 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 YTHDF3Q7Z739 585 aaKnown RBP6.18□□□□□ -1.42
SCARB2-218ENST00000639715 GALNT15Q8N3T1 639 aa6.18□□□□□ -1.42
SCARB2-218ENST00000639715 PHC3Q8NDX5 983 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms