RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 HOXD8P13378 290 aaPredicted RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 IL9P15248 144 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ATP2A2P16615 1042 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ATP4AP20648 1035 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 COL9A1P20849 921 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 UBA1P22314 1058 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 DNAJB1P25685 340 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CDC27P30260 824 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 HOXC8P31273 242 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 COPB2P35606 906 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 LTBRP36941 435 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 GHRHRQ02643 423 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMEM62Q0P6H9 643 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 FUT2Q10981 343 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CKAP5Q14008 2032 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CAMK1Q14012 370 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 MFSD10Q14728 455 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 PPP2R5BQ15173 497 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 NECTIN1Q15223 517 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 KIAA0753Q2KHM9 967 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMEM67Q5HYA8 995 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 TJAP1Q5JTD0 557 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CELF3Q5SZQ8 465 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 MARCH8Q5T0T0 291 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 IFIT1BQ5T764 474 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 UTP14CQ5TAP6 766 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ARHGEF16Q5VV41 709 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 PPP2R2DQ66LE6 453 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 KANK3Q6NY19 840 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 PSRC1Q6PGN9 363 aaPredicted RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 LRRC8DQ7L1W4 858 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CYFIP1Q7L576 1253 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ADGRD2Q7Z7M1 963 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SERINC5Q86VE9 423 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 DGKHQ86XP1 1220 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 HERC6Q8IVU3 1022 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 DHX37Q8IY37 1157 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 RGS22Q8NE09 1264 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 DNERQ8NFT8 737 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ADAMTS19Q8TE59 1207 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SCFD2Q8WU76 684 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 LMBR1Q8WVP7 490 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ESR2Q92731 530 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 MAP4K1Q92918 833 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 GJA10Q969M2 543 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZNF668Q96K58 619 aaPredicted RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 TTC14Q96N46 770 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ASB2Q96Q27 587 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 PPP1R16BQ96T49 567 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 PHOX2BQ99453 314 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 GAS2L1Q99501 681 aaPredicted RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 GPR20Q99678 358 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 DSCC1Q9BVC3 393 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 FTOQ9C0B1 505 aaKnown RBP eCLIP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CHMP4BQ9H444 224 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 RWDD1Q9H446 243 aaPredicted RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 KAT14Q9H8E8 782 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 AGO3Q9H9G7 860 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SUGCTQ9HAC7 445 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SLC28A3Q9HAS3 691 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 LY9Q9HBG7 655 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SPC25Q9HBM1 224 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 DIAPH3Q9NSV4 1193 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 GJB4Q9NTQ9 266 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 FAM217BQ9NTX9 383 aaPredicted RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SETD4Q9NVD3 440 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 POLR3EQ9NVU0 708 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 THEGQ9P2T0 379 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 ADD3Q9UEY8 706 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 GTF2IRD1Q9UHL9 959 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 MSRAQ9UJ68 235 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CDH22Q9UJ99 828 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 BRPF3Q9ULD4 1205 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SYNPO2Q9UMS6 1093 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 Q9Y3F1 56 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 PCDHA11Q9Y5I1 949 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 PCDHA1Q9Y5I3 950 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 RBM8AQ9Y5S9 174 aaKnown RBP1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 FRMPD4Q14CM0 1322 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 MROH7Q68CQ1 1323 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 CNTNAP5Q8WYK1 1306 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 LAMA1P25391 3075 aa1.87□□□□□ -2.11
SYNGAP1-216ENST00000636640 SDK1Q7Z5N4 2213 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 MYLKQ15746 1914 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMEM265A0A087WTH1 108 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 PNMA6FA0A0J9YX94 578 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 TMEM150BA6NC51 233 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 GRXCR2A6NFK2 248 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZBTB42B2RXF5 422 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 SPATA31C2B4DYI2 1134 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 H3BQ06 376 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 H3BRB1 525 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 DDX39AO00148 427 aaKnown RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 PITPNM1O00562 1244 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 SH2B2O14492 632 aaPredicted RBP1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 ZBTB5O15062 677 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 PRC1O43663 620 aa1.86□□□□□ -2.11
SYNGAP1-216ENST00000636640 B4GALT3O60512 393 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms