RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 IRF5Q13568 498 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 PPP2R5BQ15173 497 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 PTPAQ15257 358 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 PKN2Q16513 984 aaKnown RBP17.35■□□□□ 0.37
CLN8-209ENST00000635970 CT47A1Q5JQC4 288 aaPredicted RBP17.35■□□□□ 0.37
CLN8-209ENST00000635970 SLC30A10Q6XR72 485 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 DPP9Q86TI2 863 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 TRIB2Q92519 343 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 GPKOWQ92917 476 aaPredicted RBP eCLIP17.35■□□□□ 0.37
CLN8-209ENST00000635970 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
CLN8-209ENST00000635970 FLRT1Q9NZU1 646 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.35■□□□□ 0.37
CLN8-209ENST00000635970 PPP2R2CQ9Y2T4 447 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 OPLAHO14841 1288 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 ATP1A3P13637 1013 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLN8-209ENST00000635970 TBC1D5Q92609 795 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 ALG1Q9BT22 464 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 CYP39A1Q9NYL5 469 aa17.35■□□□□ 0.37
CLN8-209ENST00000635970 V9GY48 417 aaPredicted RBP17.35■□□□□ 0.37
CLN8-209ENST00000635970 CNTN2Q02246 1040 aa17.34■□□□□ 0.37
CLN8-209ENST00000635970 TUBB2AQ13885 445 aa17.34■□□□□ 0.37
CLN8-209ENST00000635970 SHC4Q6S5L8 630 aa17.34■□□□□ 0.37
CLN8-209ENST00000635970 KRBA2Q6ZNG9 492 aa17.34■□□□□ 0.37
CLN8-209ENST00000635970 TRIML1Q8N9V2 468 aa17.34■□□□□ 0.37
CLN8-209ENST00000635970 MLKLQ8NB16 471 aa17.34■□□□□ 0.37
CLN8-209ENST00000635970 RABGGTAQ92696 567 aa17.34■□□□□ 0.37
CLN8-209ENST00000635970 BAG1Q99933 345 aaPredicted RBP17.34■□□□□ 0.37
CLN8-209ENST00000635970 TUBB2BQ9BVA1 445 aa17.34■□□□□ 0.37
CLN8-209ENST00000635970 LRRC37A2A6NM11 1700 aa17.34■□□□□ 0.37
CLN8-209ENST00000635970 DNAJC25-GNG10A0A024R161 153 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 VWA3AA6NCI4 1184 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 HOXC6P09630 235 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 IFNAR1P17181 557 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 GRK4P32298 578 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 TRIM32Q13049 653 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 GNL2Q13823 731 aaKnown RBP17.33■□□□□ 0.37
CLN8-209ENST00000635970 TRIM29Q14134 588 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 SLC9C1Q4G0N8 1177 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 TMEM139Q8IV31 216 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 LRRN4CLQ8ND94 238 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 CNNM3Q8NE01 707 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 CARD6Q9BX69 1037 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 SLC26A6Q9BXS9 759 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 PNMA2Q9UL42 364 aa17.33■□□□□ 0.37
CLN8-209ENST00000635970 TULP2O00295 520 aa17.33■□□□□ 0.36
CLN8-209ENST00000635970 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.36
CLN8-209ENST00000635970 BAATQ14032 418 aaPredicted RBP17.33■□□□□ 0.36
CLN8-209ENST00000635970 ZNF792Q3KQV3 632 aa17.33■□□□□ 0.36
CLN8-209ENST00000635970 NT5DC1Q5TFE4 455 aa17.33■□□□□ 0.36
CLN8-209ENST00000635970 WWC2Q6AWC2 1192 aa17.33■□□□□ 0.36
CLN8-209ENST00000635970 HEATR3Q7Z4Q2 680 aa17.33■□□□□ 0.36
CLN8-209ENST00000635970 FGD4Q96M96 766 aa17.33■□□□□ 0.36
CLN8-209ENST00000635970 MRPL11Q9Y3B7 192 aaKnown RBP17.33■□□□□ 0.36
CLN8-209ENST00000635970 ASTN1O14525 1302 aa17.33■□□□□ 0.36
CLN8-209ENST00000635970 PFASO15067 1338 aa17.33■□□□□ 0.36
CLN8-209ENST00000635970 MYCP01106 439 aaPredicted RBP17.32■□□□□ 0.36
CLN8-209ENST00000635970 XRCC5P13010 732 aaKnown RBP17.32■□□□□ 0.36
CLN8-209ENST00000635970 CALML3P27482 149 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 RPS6P62753 249 aaKnown RBP17.32■□□□□ 0.36
CLN8-209ENST00000635970 SPECC1LQ69YQ0 1117 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 KRT40Q6A162 431 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 TYW1BQ6NUM6 668 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 KANK3Q6NY19 840 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 RNF207Q6ZRF8 634 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 RSRC2Q7L4I2 434 aaKnown RBP17.32■□□□□ 0.36
CLN8-209ENST00000635970 SLAIN1Q8ND83 568 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 ENOX1Q8TC92 643 aaKnown RBP17.32■□□□□ 0.36
CLN8-209ENST00000635970 WASF1Q92558 559 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 MAML3Q96JK9 1138 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 ARFGAP3Q9NP61 516 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 KCNH3Q9ULD8 1083 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 MRFAP1Q9Y605 127 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 STK36Q9NRP7 1315 aa17.32■□□□□ 0.36
CLN8-209ENST00000635970 PKN1Q16512 942 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 CC2D1AQ6P1N0 951 aaPredicted RBP17.31■□□□□ 0.36
CLN8-209ENST00000635970 MSL3Q8N5Y2 521 aaKnown RBP17.31■□□□□ 0.36
CLN8-209ENST00000635970 PXYLP1Q8TE99 480 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 FANCLQ9NW38 375 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 POTEB2H3BUK9 544 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 CFBP00751 764 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 PNOCQ13519 176 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 TNS4Q8IZW8 715 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 FAM133AQ8N9E0 248 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 KRI1Q8N9T8 703 aaKnown RBP17.31■□□□□ 0.36
CLN8-209ENST00000635970 NAA15Q9BXJ9 866 aaKnown RBP17.31■□□□□ 0.36
CLN8-209ENST00000635970 RNF26Q9BY78 433 aaPredicted RBP17.31■□□□□ 0.36
CLN8-209ENST00000635970 ST7Q9NRC1 585 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 PSD3Q9NYI0 1048 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 COL20A1Q9P218 1284 aa17.31■□□□□ 0.36
CLN8-209ENST00000635970 SOWAHBA6NEL2 793 aa17.3■□□□□ 0.36
CLN8-209ENST00000635970 PRPF3O43395 683 aaKnown RBP17.3■□□□□ 0.36
CLN8-209ENST00000635970 INHAP05111 366 aa17.3■□□□□ 0.36
CLN8-209ENST00000635970 HOXA13P31271 388 aaPredicted RBP17.3■□□□□ 0.36
CLN8-209ENST00000635970 GNG11P61952 73 aa17.3■□□□□ 0.36
CLN8-209ENST00000635970 PPP2R3AQ06190 1150 aa17.3■□□□□ 0.36
CLN8-209ENST00000635970 BRD3Q15059 726 aa17.3■□□□□ 0.36
CLN8-209ENST00000635970 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
CLN8-209ENST00000635970 GOLGA1Q92805 767 aa17.3■□□□□ 0.36
CLN8-209ENST00000635970 CCDC34Q96HJ3 373 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms