RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 TMTC2Q8N394 836 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 FBXL16Q8N461 479 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 CCDC82Q8N4S0 544 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 USP38Q8NB14 1042 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 CAGE1Q8TC20 777 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 AFAP1L1Q8TED9 768 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 SPZ1Q9BXG8 430 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 AGXT2Q9BYV1 514 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 TANC1Q9C0D5 1861 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 NOP56O00567 594 aaKnown RBP18.46■□□□□ 0.55
CD40-207ENST00000620709 PPFIA4O75335 1185 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 F2P00734 622 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 GNAQP50148 359 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 CCDC85BQ15834 202 aaPredicted RBP18.46■□□□□ 0.55
CD40-207ENST00000620709 USP17L6PQ6QN14 398 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 LRRC8DQ7L1W4 858 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 SRBD1Q8N5C6 995 aaKnown RBP18.46■□□□□ 0.55
CD40-207ENST00000620709 MAP3K14Q99558 947 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 LZTS2Q9BRK4 669 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 LARP6Q9BRS8 491 aaKnown RBP18.46■□□□□ 0.55
CD40-207ENST00000620709 TPCN1Q9ULQ1 816 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 PCDHA11Q9Y5I1 949 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 SLC12A7Q9Y666 1083 aa18.46■□□□□ 0.55
CD40-207ENST00000620709 hCG_1642624A0A1W2PR95 340 aa18.45■□□□□ 0.54
CD40-207ENST00000620709 TGFB3P10600 412 aa18.45■□□□□ 0.54
CD40-207ENST00000620709 SELPP16109 830 aa18.45■□□□□ 0.54
CD40-207ENST00000620709 ZNF200P98182 395 aaPredicted RBP18.45■□□□□ 0.54
CD40-207ENST00000620709 DHX38Q92620 1227 aaKnown RBP18.45■□□□□ 0.54
CD40-207ENST00000620709 BRF1Q92994 677 aa18.45■□□□□ 0.54
CD40-207ENST00000620709 CTAGE1Q96RT6 745 aa18.45■□□□□ 0.54
CD40-207ENST00000620709 BCAS3Q9H6U6 928 aa18.45■□□□□ 0.54
CD40-207ENST00000620709 LARGE1O95461 756 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 CALM1P0DP23 149 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 CALM2P0DP24 149 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 CALM3P0DP25 149 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 KCNJ6P48051 423 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 MRPS9P82933 396 aaKnown RBP18.44■□□□□ 0.54
CD40-207ENST00000620709 SP4Q02446 784 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 ME3Q16798 604 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 MICALL1Q8N3F8 863 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 CERS4Q9HA82 394 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 RBAK-RBAKDNI3L0D1 243 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 HAS3O00219 553 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 CA3P07451 260 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 CKBP12277 381 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 ADGRE1Q14246 886 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 SYNE3Q6ZMZ3 975 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 CYFIP1Q7L576 1253 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 MICU3Q86XE3 530 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 SLC9A7Q96T83 725 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 MTA3Q9BTC8 594 aa18.44■□□□□ 0.54
CD40-207ENST00000620709 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.44■□□□□ 0.54
CD40-207ENST00000620709 CHD7Q9P2D1 2997 aa18.43■□□□□ 0.54
CD40-207ENST00000620709 SMARCA1P28370 1054 aa18.43■□□□□ 0.54
CD40-207ENST00000620709 LIFRP42702 1097 aa18.43■□□□□ 0.54
CD40-207ENST00000620709 PTK7Q13308 1070 aa18.43■□□□□ 0.54
CD40-207ENST00000620709 UTP14CQ5TAP6 766 aaKnown RBP18.43■□□□□ 0.54
CD40-207ENST00000620709 PSTPIP2Q9H939 334 aa18.43■□□□□ 0.54
CD40-207ENST00000620709 PRDM6Q9NQX0 595 aa18.43■□□□□ 0.54
CD40-207ENST00000620709 VCANP13611 3396 aa18.43■□□□□ 0.54
CD40-207ENST00000620709 DOCK5Q9H7D0 1870 aa18.43■□□□□ 0.54
CD40-207ENST00000620709 KIF28PB7ZC32 967 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 FIBPO43427 364 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 STAM2O75886 525 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 NEDD9Q14511 834 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 UBE2SQ16763 222 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 HEATR3Q7Z4Q2 680 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 HERC6Q8IVU3 1022 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 CCDC83Q8IWF9 413 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 FANCBQ8NB91 859 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 WNT8BQ93098 351 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 C16orf70Q9BSU1 422 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 ZBED2Q9BTP6 218 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 FRMPD4Q14CM0 1322 aa18.42■□□□□ 0.54
CD40-207ENST00000620709 C17orf102A2RUQ5 167 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 SPATA31C2B4DYI2 1134 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 H3BRB1 525 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 MEIS2O14770 477 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 BAIAP3O94812 1187 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 LGALS2P05162 132 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 HOXD8P13378 290 aaPredicted RBP18.41■□□□□ 0.54
CD40-207ENST00000620709 THPOP40225 353 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 HIC1Q14526 733 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 ZNF618Q5T7W0 954 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 TMCO2Q7Z6W1 182 aaPredicted RBP18.41■□□□□ 0.54
CD40-207ENST00000620709 NLRX1Q86UT6 975 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 PHOSPHO2Q8TCD6 241 aa18.41■□□□□ 0.54
CD40-207ENST00000620709 INPP4AQ96PE3 977 aaPredicted RBP18.41■□□□□ 0.54
CD40-207ENST00000620709 TUT1Q9H6E5 874 aaKnown RBP18.41■□□□□ 0.54
CD40-207ENST00000620709 NAP1L2Q9ULW6 460 aaPredicted RBP18.41■□□□□ 0.54
CD40-207ENST00000620709 RFXAPO00287 272 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 TLL1O43897 1013 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 NBNO60934 754 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 ICAM3P32942 547 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 EVCP57679 992 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 APOBRQ0VD83 1088 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 SEMA3FQ13275 785 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 PCNX4Q63HM2 1172 aa18.4■□□□□ 0.54
CD40-207ENST00000620709 CNKSR3Q6P9H4 555 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms