RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.6□□□□□ -0.71
SYN3-213ENST00000619146 FAM184AQ8NB25 1140 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 RETREG2Q8NC44 543 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 RGS22Q8NE09 1264 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 ZBED2Q9BTP6 218 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 SPZ1Q9BXG8 430 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 RNF26Q9BY78 433 aaPredicted RBP10.6□□□□□ -0.71
SYN3-213ENST00000619146 WDR11Q9BZH6 1224 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 CYP39A1Q9NYL5 469 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 MAD2L2Q9UI95 211 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 CCPG1Q9ULG6 757 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 SPTBN4Q9H254 2564 aa10.6□□□□□ -0.71
SYN3-213ENST00000619146 KIF28PB7ZC32 967 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 JAK2O60674 1132 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 POU3F3P20264 500 aaPredicted RBP10.59□□□□□ -0.71
SYN3-213ENST00000619146 KCNA5P22460 613 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 CALML3P27482 149 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 GJB2P29033 226 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 KCNJ6P48051 423 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 FUT2Q10981 343 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 BAATQ14032 418 aaPredicted RBP10.59□□□□□ -0.71
SYN3-213ENST00000619146 TCTN1Q2MV58 587 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 TTBK2Q6IQ55 1244 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 EP400NLQ6ZTU2 488 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 POLR3EQ9NVU0 708 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 ORC3Q9UBD5 711 aaPredicted RBP10.59□□□□□ -0.71
SYN3-213ENST00000619146 PRR12Q9ULL5 1215 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 NOD1Q9Y239 953 aa10.59□□□□□ -0.71
SYN3-213ENST00000619146 PI4K2BG5E9Z4 385 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 NFIBO00712 420 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 PRPF3O43395 683 aaKnown RBP10.58□□□□□ -0.72
SYN3-213ENST00000619146 PLA2G6O60733 806 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 PLEKHA8P1O95397 391 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 DEXIO95424 95 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 PFKMP08237 780 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 SUPT20HL2P0C7V6 817 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 DDIT3P35638 169 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 MRE11P49959 708 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 ALDH5A1P51649 535 aaPredicted RBP10.58□□□□□ -0.72
SYN3-213ENST00000619146 WDR5P61964 334 aaKnown RBP10.58□□□□□ -0.72
SYN3-213ENST00000619146 NUCB2P80303 420 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 DUSP28Q4G0W2 176 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 SLC30A10Q6XR72 485 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 FAM177A1Q8N128 213 aaPredicted RBP10.58□□□□□ -0.72
SYN3-213ENST00000619146 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
SYN3-213ENST00000619146 CHURC1Q8WUH1 139 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
SYN3-213ENST00000619146 MTG1Q9BT17 334 aaPredicted RBP10.58□□□□□ -0.72
SYN3-213ENST00000619146 SLC26A6Q9BXS9 759 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 VTA1Q9NP79 307 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 CHMP5Q9NZZ3 219 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 V9GY48 417 aaPredicted RBP10.58□□□□□ -0.72
SYN3-213ENST00000619146 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.72
SYN3-213ENST00000619146 TECTAO75443 2155 aa10.58□□□□□ -0.72
SYN3-213ENST00000619146 MYO10Q9HD67 2058 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 KMT2EQ8IZD2 1858 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 GOLGA8HP0CJ92 632 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 XBP1P17861 261 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 CPT1AP50416 773 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 TRIM29Q14134 588 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 PTGISQ16647 500 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 LARP1BQ659C4 914 aaKnown RBP10.57□□□□□ -0.72
SYN3-213ENST00000619146 BTNL9Q6UXG8 535 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 FAM160B2Q86V87 743 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 STAG2Q8N3U4 1231 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.57□□□□□ -0.72
SYN3-213ENST00000619146 PHKBQ93100 1093 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 RIOX1Q9H6W3 641 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 UBE2ZQ9H832 354 aaPredicted RBP10.57□□□□□ -0.72
SYN3-213ENST00000619146 SUGCTQ9HAC7 445 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 GPCPD1Q9NPB8 672 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 SEC63Q9UGP8 760 aaKnown RBP10.57□□□□□ -0.72
SYN3-213ENST00000619146 Q9Y3F1 56 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 CFAP54Q96N23 3096 aa10.57□□□□□ -0.72
SYN3-213ENST00000619146 WDR87Q6ZQQ6 2873 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 USP34Q70CQ2 3546 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 PLXNA4Q9HCM2 1894 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 H3BQ06 376 aaPredicted RBP10.56□□□□□ -0.72
SYN3-213ENST00000619146 H3BQV1 296 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 SORBS3O60504 671 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 ARIH2O95376 493 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 FDPSP14324 419 aaKnown RBP10.56□□□□□ -0.72
SYN3-213ENST00000619146 TRAF1Q13077 416 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 TKFCQ3LXA3 575 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 PTCRAQ6ISU1 281 aaPredicted RBP10.56□□□□□ -0.72
SYN3-213ENST00000619146 GDF6Q6KF10 455 aaPredicted RBP10.56□□□□□ -0.72
SYN3-213ENST00000619146 FAM178BQ8IXR5 827 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 GJD3Q8N144 294 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 CMTR1Q8N1G2 835 aaKnown RBP10.56□□□□□ -0.72
SYN3-213ENST00000619146 CCDC82Q8N4S0 544 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 PHOSPHO2Q8TCD6 241 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 C8orf76Q96K31 380 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 C17orf80Q9BSJ5 609 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 ALG1Q9BT22 464 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 PNMA2Q9UL42 364 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 CNTNAP5Q8WYK1 1306 aa10.56□□□□□ -0.72
SYN3-213ENST00000619146 hCG_1984214I3L0E3 225 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 CYTH3O43739 400 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms