RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 SYNPO2Q9UMS6 1093 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 F8VZ95 297 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 FSBPO95073 299 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 FGRP09769 529 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 TECP42680 631 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 TXKP42681 527 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 UBASH3AP57075 661 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 ROR2Q01974 943 aaKnown RBP6.13□□□□□ -1.43
CPNE4-214ENST00000617767 DEUP1Q05D60 604 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 ENOX2Q16206 610 aaKnown RBP6.13□□□□□ -1.43
CPNE4-214ENST00000617767 SLC15A2Q16348 729 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 CCDC40Q4G0X9 1142 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 C16orf86Q6ZW13 317 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 BZW1Q7L1Q6 419 aaKnown RBP6.13□□□□□ -1.43
CPNE4-214ENST00000617767 FAM228AQ86W67 206 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 CUL5Q93034 780 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 PRMT6Q96LA8 375 aaPredicted RBP6.13□□□□□ -1.43
CPNE4-214ENST00000617767 OSBPL9Q96SU4 736 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 ZSWIM4Q9H7M6 989 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 BATF3Q9NR55 127 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 HPSEQ9Y251 543 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 SRPRBQ9Y5M8 271 aaKnown RBP6.13□□□□□ -1.43
CPNE4-214ENST00000617767 KIAA1551Q9HCM1 1747 aa6.13□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L10C9JJH3 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 CCT6AP40227 531 aaKnown RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 PPP4CP60510 307 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 FANCCQ00597 558 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 CUL4BQ13620 913 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 MYBPC3Q14896 1274 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 SEPT2Q15019 361 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 DGKHQ86XP1 1220 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 BCAS4Q8TDM0 211 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 TSC22D3Q99576 134 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 STK32BQ9NY57 414 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 PCDHA6Q9UN73 950 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 FZD1Q9UP38 647 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 CEP131Q9UPN4 1083 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 NFE2L3Q9Y4A8 694 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 PCDHA8Q9Y5H6 950 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 SNED1Q8TER0 1413 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 CCDC151A5D8V7 595 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L15C9J2P7 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L13C9JLJ4 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L11C9JVI0 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L18D6R9N7 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L22D6RA61 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L17D6RBQ6 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L19D6RCP7 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L20D6RJB6 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 MARCH6O60337 910 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 RNF40O75150 1001 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 PLCG2P16885 1265 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 FUT4P22083 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 GCLCP48506 637 aaPredicted RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L24Q0WX57 530 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 GRM4Q14833 912 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 USP17L6PQ6QN14 398 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 SLF2Q8IX21 1173 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 LARGE2Q8N3Y3 721 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 RRP36Q96EU6 259 aaKnown RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 MYO1AQ9UBC5 1043 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 PCDHA4Q9UN74 947 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 LAMB1P07942 1786 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 STXBP3O00186 592 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 PLSCR1O15162 318 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 ACTN4O43707 911 aaKnown RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 E2F6O75461 281 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 SMNDC1O75940 238 aaKnown RBP eCLIP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 CD44P16070 742 aaKnown RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 ETF1P62495 437 aaKnown RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 PPP2R3AQ06190 1150 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 NCAPHQ15003 741 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 BEND6Q5SZJ8 279 aaPredicted RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 C14orf80Q86SX3 495 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 TRIM58Q8NG06 486 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 TBCKQ8TEA7 893 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 PAGE5Q96GU1 130 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 OSBPL5Q9H0X9 879 aaPredicted RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 ZNF287Q9HBT7 754 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 SLC40A1Q9NP59 571 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 MTMR4Q9NYA4 1195 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 CTNND2Q9UQB3 1225 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 TRPC6Q9Y210 931 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 GDAQ9Y2T3 454 aa6.12□□□□□ -1.43
CPNE4-214ENST00000617767 DDX60LQ5H9U9 1706 aaKnown RBP6.12□□□□□ -1.43
CPNE4-214ENST00000617767 COL11A2P13942 1736 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 TRIM49BA6NDI0 452 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 YDJCA8MPS7 323 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 KRT38O76015 456 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 HLA-DOAP06340 250 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 SHMT1P34896 483 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 STAT6P42226 847 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 SMTNP53814 917 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 ADKP55263 362 aaKnown RBP6.11□□□□□ -1.43
CPNE4-214ENST00000617767 SESN3P58005 492 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 UBXN2AP68543 259 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 MYL5Q02045 173 aa6.11□□□□□ -1.43
CPNE4-214ENST00000617767 ADCY1Q08828 1119 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms