RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 CHD1O14646 1710 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 SFI1A8K8P3 1242 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 C11orf57Q6ZUT1 292 aaPredicted RBP20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 PTCH1Q13635 1447 aa20.16■□□□□ 0.82
AC008878.3-201ENST00000617428 CCNE1P24864 410 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 KIF11P52732 1056 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 ZNF131P52739 623 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 SNRNP48Q6IEG0 339 aaKnown RBP20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 PIGOQ8TEQ8 1089 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 USP17L10C9JJH3 530 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 GOLGA8FQ08AF8 430 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 GOLGA8DPQ0D2H9 430 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 RESTQ13127 1097 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 LLGL1Q15334 1064 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 PCDHA6Q9UN73 950 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 PCDHA8Q9Y5H6 950 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 NEDD4P46934 1319 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 CIB2O75838 187 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 CD58P19256 250 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 CHRNA5P30532 468 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 MYRIPQ8NFW9 859 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 FAM84BQ96KN1 310 aaPredicted RBP20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 MROH7-TTC4A0A0A0MT08 1334 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 GOLGA8IPA6NC78 632 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 GOLGA8JA6NMD2 632 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 PEX3P56589 373 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 FBXO40Q9UH90 709 aa20.15■□□□□ 0.82
AC008878.3-201ENST00000617428 AP3B2Q13367 1082 aa20.14■□□□□ 0.82
AC008878.3-201ENST00000617428 ARL6IP4Q66PJ3 421 aaKnown RBP20.14■□□□□ 0.82
AC008878.3-201ENST00000617428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.14■□□□□ 0.82
AC008878.3-201ENST00000617428 SAMSN1Q9NSI8 373 aaKnown RBP20.14■□□□□ 0.82
AC008878.3-201ENST00000617428 MAD1L1Q9Y6D9 718 aa20.14■□□□□ 0.82
AC008878.3-201ENST00000617428 TTBK2Q6IQ55 1244 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 CABS1Q96KC9 395 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 GCNT4Q9P109 453 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 CRB1P82279 1406 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 MTMR1Q13613 665 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 NEDD9Q14511 834 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 PSMD6Q15008 389 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 GKAP1Q5VSY0 366 aaPredicted RBP20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 B4GALNT4Q76KP1 1039 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 ENAHQ8N8S7 591 aaPredicted RBP20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 PPFIBP2Q8ND30 876 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 UBE2TQ9NPD8 197 aaPredicted RBP20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 PLCB1Q9NQ66 1216 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 IKBKBO14920 756 aa20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 TDRD7Q8NHU6 1098 aaKnown RBP20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 MKRN1Q9UHC7 482 aaKnown RBP20.14■□□□□ 0.81
AC008878.3-201ENST00000617428 F5H6K3 240 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 GFPT2O94808 682 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 KLRC3Q07444 240 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 STXBP2Q15833 593 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 CYB5R4Q7L1T6 521 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 NRBP1Q9UHY1 535 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 CEP85LQ5SZL2 805 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 CATSPER4Q7RTX7 472 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 GAS2L3Q86XJ1 694 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 THNSL1Q8IYQ7 743 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 SAT1P21673 171 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 MAPK4P31152 587 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 STX2P32856 288 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 ANKRD20A3Q5VUR7 823 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 SP8Q8IXZ3 490 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 PAGE5Q96GU1 130 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 LRRC4Q9HBW1 653 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 JCADQ9P266 1359 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 PHBP35232 272 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 RBL2Q08999 1139 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 TRIM28Q13263 835 aaKnown RBP20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 RINT1Q6NUQ1 792 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 RNF146Q9NTX7 359 aa20.13■□□□□ 0.81
AC008878.3-201ENST00000617428 SHROOM2Q13796 1616 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 RCSD1Q6JBY9 416 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 TMED8Q6PL24 325 aaPredicted RBP20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 FAM133AQ8N9E0 248 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 OTUD5Q96G74 571 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 CCDC68Q9H2F9 335 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 TACC3Q9Y6A5 838 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 ENC1O14682 589 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 MYO1EQ12965 1108 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 RILPQ96NA2 401 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 POTEMA6NI47 508 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 A6NNZ2 444 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 ATF2P15336 505 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 PSMD2Q13200 908 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 TUBB8Q3ZCM7 444 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 MAGOHBQ96A72 148 aaKnown RBP20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 MCUR1Q96AQ8 359 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 MSTO1Q9BUK6 570 aa20.12■□□□□ 0.81
AC008878.3-201ENST00000617428 ABCD1P33897 745 aa20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 CCDC62Q6P9F0 684 aa20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 RFX6Q8HWS3 928 aa20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 RPF1Q9H9Y2 349 aaKnown RBP20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 SH3GLB2Q9NR46 395 aa20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 TET3O43151 1660 aa20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 PFKFB3Q16875 520 aaPredicted RBP20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 ENOX1Q8TC92 643 aaKnown RBP20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 RWDD2AQ9UIY3 292 aa20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 FEM1BQ9UK73 627 aa20.11■□□□□ 0.81
AC008878.3-201ENST00000617428 TYW5A2RUC4 315 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms