RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 CYFIP1Q7L576 1253 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 PPTC7Q8NI37 304 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 GTF3C6Q969F1 213 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 ZBTB10Q96DT7 871 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 FAM161BQ96MY7 647 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 SPATA33Q96N06 139 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 TTYH1Q9H313 450 aaPredicted RBP9.94□□□□□ -0.82
SNCA-212ENST00000611107 HIPK3Q9H422 1215 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 RIC8AQ9NPQ8 531 aa9.94□□□□□ -0.82
SNCA-212ENST00000611107 MROH7Q68CQ1 1323 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 SMCO2A6NFE2 343 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 CTDNEP1O95476 244 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 F2P00734 622 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 ARP10275 920 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 NAPAP54920 295 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 MBTPS1Q14703 1052 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 MFSD10Q14728 455 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 NPY5RQ15761 445 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 PFKFB3Q16875 520 aaPredicted RBP9.93□□□□□ -0.82
SNCA-212ENST00000611107 KIAA0753Q2KHM9 967 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 TRIM71Q2Q1W2 868 aaKnown RBP9.93□□□□□ -0.82
SNCA-212ENST00000611107 JAKMIP3Q5VZ66 844 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 NFRKBQ6P4R8 1299 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 NECAB1Q8N987 351 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 CRYGNQ8WXF5 182 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 GUCD1Q96NT3 240 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 PCYT2Q99447 389 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 GPR20Q99678 358 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 RNF26Q9BY78 433 aaPredicted RBP9.93□□□□□ -0.82
SNCA-212ENST00000611107 SLKQ9H2G2 1235 aaPredicted RBP9.93□□□□□ -0.82
SNCA-212ENST00000611107 GJB4Q9NTQ9 266 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 MTMR10Q9NXD2 777 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 BARHL2Q9NY43 387 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 EVPLQ92817 2033 aa9.93□□□□□ -0.82
SNCA-212ENST00000611107 STK36Q9NRP7 1315 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 ARID2Q68CP9 1835 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 GSTTP1A0A1W2PQM5 241 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 B4DLN1 442 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 TLR3O15455 904 aaKnown RBP9.92□□□□□ -0.82
SNCA-212ENST00000611107 PRPF3O43395 683 aaKnown RBP9.92□□□□□ -0.82
SNCA-212ENST00000611107 ARHGEF15O94989 841 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 LGALS2P05162 132 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 SCG2P13521 617 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 MRPL12P52815 198 aaKnown RBP9.92□□□□□ -0.82
SNCA-212ENST00000611107 ITGB3BPQ13352 177 aaPredicted RBP9.92□□□□□ -0.82
SNCA-212ENST00000611107 LAMC2Q13753 1193 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 DGKDQ16760 1214 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 OTOP2Q7RTS6 562 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 DEFB128Q7Z7B8 93 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 DEFB123Q8N688 67 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 RNPC3Q96LT9 517 aaKnown RBP9.92□□□□□ -0.82
SNCA-212ENST00000611107 MPHOSPH6Q99547 160 aaKnown RBP9.92□□□□□ -0.82
SNCA-212ENST00000611107 SLC26A6Q9BXS9 759 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 ANO3Q9BYT9 981 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 IL23AQ9NPF7 189 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 VPS54Q9P1Q0 977 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 GTF2IRD1Q9UHL9 959 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 LIMCH1Q9UPQ0 1083 aa9.92□□□□□ -0.82
SNCA-212ENST00000611107 IGLV3-22A0A075B6J6 115 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 FAM86B1E9PN63 330 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 CPLX1O14810 134 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 FIBPO43427 364 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 ST18O60284 1047 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 FAM86B2P0C5J1 330 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 MYOGP15173 224 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 HOXC8P31273 242 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 ADCY7P51828 1080 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 PTGISQ16647 500 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 UTP14CQ5TAP6 766 aaKnown RBP9.91□□□□□ -0.82
SNCA-212ENST00000611107 PPP1R18Q6NYC8 613 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 SPRED2Q7Z698 418 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 TMCO2Q7Z6W1 182 aaPredicted RBP9.91□□□□□ -0.82
SNCA-212ENST00000611107 SESTD1Q86VW0 696 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 NSUN7Q8NE18 718 aaKnown RBP9.91□□□□□ -0.82
SNCA-212ENST00000611107 CUL5Q93034 780 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 GJA10Q969M2 543 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 MXRA8Q9BRK3 442 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 RNPEPQ9H4A4 650 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 MLXIPQ9HAP2 919 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 JADE2Q9NQC1 790 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 EYSQ5T1H1 3165 aa9.91□□□□□ -0.82
SNCA-212ENST00000611107 MICAL3Q7RTP6 2002 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 hCG_1984214I3L0E3 225 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 DHX15O43143 795 aaKnown RBP9.9□□□□□ -0.82
SNCA-212ENST00000611107 TREHO43280 583 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 JAK2O60674 1132 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 KPNA6O60684 536 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 NBNO60934 754 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 PPFIA4O75335 1185 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 CCNE2O96020 404 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 IQCF3P0C7M6 154 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 SMIM10L2AP0DMW4 78 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 SMIM10L2BP0DMW5 78 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 TGFB3P10600 412 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 SREBF1P36956 1147 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 RABGGTBP53611 331 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 TRAF1Q13077 416 aa9.9□□□□□ -0.82
SNCA-212ENST00000611107 PPIGQ13427 754 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNCA-212ENST00000611107 METTL7BQ6UX53 244 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms