RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 SEMA3FQ13275 785 aa13.73□□□□□ -0.21
FDPS-220ENST00000611010 DHX37Q8IY37 1157 aaKnown RBP13.73□□□□□ -0.21
FDPS-220ENST00000611010 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
FDPS-220ENST00000611010 RC3H2Q9HBD1 1191 aaKnown RBP13.73□□□□□ -0.21
FDPS-220ENST00000611010 MRPL11Q9Y3B7 192 aaKnown RBP13.73□□□□□ -0.21
FDPS-220ENST00000611010 TTC3P53804 2025 aa13.73□□□□□ -0.21
FDPS-220ENST00000611010 POTEB3A0JP26 581 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 RSPH10B2B2RC85 870 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 H3BNC9 293 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 AMHP03971 560 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 LGALS2P05162 132 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 RSPH10BP0C881 870 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 SMIM10L2AP0DMW4 78 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 SMIM10L2BP0DMW5 78 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
FDPS-220ENST00000611010 SDSP20132 328 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 SSTR3P32745 418 aaPredicted RBP13.72□□□□□ -0.21
FDPS-220ENST00000611010 POTEBQ6S5H4 581 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 STOX1Q6ZVD7 989 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 TRIM50Q86XT4 487 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 MCF2L2Q86YR7 1114 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 TOP1MTQ969P6 601 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 SPATA33Q96N06 139 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 BACH2Q9BYV9 841 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 RNF41Q9H4P4 317 aaPredicted RBP13.72□□□□□ -0.21
FDPS-220ENST00000611010 KAT14Q9H8E8 782 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 VAT1LQ9HCJ6 419 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
FDPS-220ENST00000611010 FRMPD4Q14CM0 1322 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 PPFIA4O75335 1185 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 PARP1P09874 1014 aaKnown RBP13.71□□□□□ -0.21
FDPS-220ENST00000611010 ADAM17P78536 824 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 DLX2Q07687 328 aaPredicted RBP13.71□□□□□ -0.21
FDPS-220ENST00000611010 GPM6BQ13491 265 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 SEC23AQ15436 765 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 TIGD5Q53EQ6 642 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 VSIG10LQ86VR7 867 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 BANK1Q8NDB2 785 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 PABPC5Q96DU9 382 aaKnown RBP13.71□□□□□ -0.21
FDPS-220ENST00000611010 LNPKQ9C0E8 428 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 MAD2L2Q9UI95 211 aa13.71□□□□□ -0.21
FDPS-220ENST00000611010 C17orf102A2RUQ5 167 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 ZNF213O14771 459 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 DHX16O60231 1041 aaKnown RBP13.7□□□□□ -0.22
FDPS-220ENST00000611010 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
FDPS-220ENST00000611010 NHLH1Q02575 133 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 HDAC1Q13547 482 aaPredicted RBP13.7□□□□□ -0.22
FDPS-220ENST00000611010 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 IQCA1Q86XH1 822 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 TICAM2Q86XR7 235 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 TMEM192Q8IY95 271 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 ATP6V0A1Q93050 837 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 RILPL2Q969X0 211 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 AMNQ9BXJ7 453 aa13.7□□□□□ -0.22
FDPS-220ENST00000611010 TRIM6-TRIM34B2RNG4 842 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 H3BRB1 525 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 DCXO43602 365 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 CYTH3O43739 400 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 TBX10O75333 385 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 UPP2O95045 317 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 GTF2F1P35269 517 aaKnown RBP eCLIP13.69□□□□□ -0.223e-8■■■□□ 17.1
FDPS-220ENST00000611010 IRS1P35568 1242 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 MRE11P49959 708 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 RPAINQ86UA6 219 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 FBXL18Q96ME1 805 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 SAMD11Q96NU1 681 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 YME1L1Q96TA2 773 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 NSUN3Q9H649 340 aaKnown RBP13.69□□□□□ -0.22
FDPS-220ENST00000611010 TUT1Q9H6E5 874 aaKnown RBP13.69□□□□□ -0.22
FDPS-220ENST00000611010 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
FDPS-220ENST00000611010 MYO15AQ9UKN7 3530 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 FNDC1Q4ZHG4 1894 aaPredicted RBP13.68□□□□□ -0.22
FDPS-220ENST00000611010 PALM3A6NDB9 673 aaPredicted RBP13.68□□□□□ -0.22
FDPS-220ENST00000611010 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 C5orf67F2Z3F1 127 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 ZBTB5O15062 677 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 GRM6O15303 877 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 HYAL1Q12794 435 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 CWC27Q6UX04 472 aaKnown RBP13.68□□□□□ -0.22
FDPS-220ENST00000611010 HFE2Q6ZVN8 426 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 SEPT8Q92599 483 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 INPP4AQ96PE3 977 aaPredicted RBP13.68□□□□□ -0.22
FDPS-220ENST00000611010 UIMC1Q96RL1 719 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 GPR20Q99678 358 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 IFIH1Q9BYX4 1025 aaKnown RBP13.68□□□□□ -0.22
FDPS-220ENST00000611010 SETD4Q9NVD3 440 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 CLDND1Q9NY35 253 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 PCDHA1Q9Y5I3 950 aa13.68□□□□□ -0.22
FDPS-220ENST00000611010 LINC01565O15544 149 aa13.67□□□□□ -0.22
FDPS-220ENST00000611010 CAND2O75155 1236 aa13.67□□□□□ -0.22
FDPS-220ENST00000611010 ALADP13716 330 aa13.67□□□□□ -0.22
FDPS-220ENST00000611010 CCND2P30279 289 aa13.67□□□□□ -0.22
FDPS-220ENST00000611010 MGAT3Q09327 533 aa13.67□□□□□ -0.22
FDPS-220ENST00000611010 CAMK1Q14012 370 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms