RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 RBM8AQ9Y5S9 174 aaKnown RBP15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 NCOR1O75376 2440 aa15.46■□□□□ 0.07
POLR2J3-219ENST00000608621 NOP56O00567 594 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 TREHO43280 583 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 STAM2O75886 525 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 SMIM10L2AP0DMW4 78 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 SMIM10L2BP0DMW5 78 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 KCNQ1P51787 676 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 SEMA3FQ13275 785 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 NEDD9Q14511 834 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 USP17L6PQ6QN14 398 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 ZNF654Q8IZM8 581 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 CTCFLQ8NI51 663 aaPredicted RBP15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 SMARCC2Q8TAQ2 1214 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 RRP36Q96EU6 259 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 NECAB3Q96P71 396 aaPredicted RBP15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 MAP3K14Q99558 947 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 USP26Q9BXU7 913 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 LY9Q9HBG7 655 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 REV3LO60673 3130 aa15.45■□□□□ 0.06
POLR2J3-219ENST00000608621 FRMPD4Q14CM0 1322 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 MEIS2O14770 477 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 FIBPO43427 364 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 SMARCA1P28370 1054 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 KIF5BP33176 963 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 CASC1Q6TDU7 716 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 METTL7BQ6UX53 244 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 CUL5Q93034 780 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 TGS1Q96RS0 853 aaKnown RBP15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 GPR20Q99678 358 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 SPZ1Q9BXG8 430 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 SUGCTQ9HAC7 445 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 SETD4Q9NVD3 440 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 MTUS1Q9ULD2 1270 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 COG5Q9UP83 839 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 TELO2Q9Y4R8 837 aa15.44■□□□□ 0.06
POLR2J3-219ENST00000608621 EMSYQ7Z589 1322 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 LINC01553A4QN01 128 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 PRC1O43663 620 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 DDAH1O94760 285 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 HOXC8P31273 242 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 ERVK-21P61565 698 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 PLEKHG4Q58EX7 1191 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 UTP14CQ5TAP6 766 aaKnown RBP15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 PCNX4Q63HM2 1172 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 NFXL1Q6ZNB6 911 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 TMTC2Q8N394 836 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 GDPD5Q8WTR4 605 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 HLA-CQ95604 372 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 LZTS2Q9BRK4 669 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 OSBPL7Q9BZF2 842 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 LMCD1Q9NZU5 365 aa15.43■□□□□ 0.06
POLR2J3-219ENST00000608621 DOCK5Q9H7D0 1870 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 BDP1A6H8Y1 2624 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 CCDC69A6NI79 296 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 PLEKHA8P1O95397 391 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 AMHP03971 560 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 MCM5P33992 734 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 GNAQP50148 359 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 SP4Q02446 784 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 MYOCDQ8IZQ8 938 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 CMTR1Q8N1G2 835 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 SRBD1Q8N5C6 995 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 SENP7Q9BQF6 1050 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 MTA3Q9BTC8 594 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 SEC63Q9UGP8 760 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 INSL6Q9Y581 213 aa15.42■□□□□ 0.06
POLR2J3-219ENST00000608621 PIK3CDO00329 1044 aa15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 SH2B2O14492 632 aaPredicted RBP15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 CTSHP09668 335 aa15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 GNAT1P11488 350 aa15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 RXRAP19793 462 aa15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 COL9A1P20849 921 aa15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 XRRA1Q6P2D8 792 aa15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 NLRX1Q86UT6 975 aa15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 TRIM50Q86XT4 487 aa15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 TMEM87BQ96K49 555 aa15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 LSG1Q9H089 658 aaKnown RBP15.41■□□□□ 0.06
POLR2J3-219ENST00000608621 SLC27A2O14975 620 aa15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 ATP9AO75110 1047 aa15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 ADAM17P78536 824 aa15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 HTRA4P83105 476 aaPredicted RBP15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 CCDC82Q8N4S0 544 aa15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 GIMAP8Q8ND71 665 aaPredicted RBP15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 SEPT8Q92599 483 aa15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 C17orf80Q9BSJ5 609 aa15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 PSTPIP2Q9H939 334 aa15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 ZNF215Q9UL58 517 aaPredicted RBP15.4■□□□□ 0.06
POLR2J3-219ENST00000608621 hCG_1642624A0A1W2PR95 340 aa15.39■□□□□ 0.05
POLR2J3-219ENST00000608621 CAND2O75155 1236 aa15.39■□□□□ 0.05
POLR2J3-219ENST00000608621 UPP2O95045 317 aa15.39■□□□□ 0.05
POLR2J3-219ENST00000608621 CALM1P0DP23 149 aa15.39■□□□□ 0.05
POLR2J3-219ENST00000608621 CALM2P0DP24 149 aa15.39■□□□□ 0.05
POLR2J3-219ENST00000608621 CALM3P0DP25 149 aa15.39■□□□□ 0.05
POLR2J3-219ENST00000608621 LIFRP42702 1097 aa15.39■□□□□ 0.05
POLR2J3-219ENST00000608621 ARHGAP4P98171 946 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms