RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 BCRP11274 1271 aa17■□□□□ 0.31
VRK3-218ENST00000600031 ZNF157P51786 506 aaPredicted RBP17■□□□□ 0.31
VRK3-218ENST00000600031 CNTN2Q02246 1040 aa17■□□□□ 0.31
VRK3-218ENST00000600031 CUL4BQ13620 913 aa17■□□□□ 0.31
VRK3-218ENST00000600031 LRCH2Q5VUJ6 765 aa17■□□□□ 0.31
VRK3-218ENST00000600031 OTOP1Q7RTM1 612 aa17■□□□□ 0.31
VRK3-218ENST00000600031 VSIG10LQ86VR7 867 aa17■□□□□ 0.31
VRK3-218ENST00000600031 KCNH7Q9NS40 1196 aa17■□□□□ 0.31
VRK3-218ENST00000600031 BLOC1S4Q9NUP1 217 aa17■□□□□ 0.31
VRK3-218ENST00000600031 KBTBD4Q9NVX7 518 aa17■□□□□ 0.31
VRK3-218ENST00000600031 EML1O00423 815 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 BMP6P22004 513 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 ERVK-9P63128 1117 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 ERVK-24P63145 666 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 TMEM119Q4V9L6 283 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 SMCR8Q8TEV9 937 aaPredicted RBP16.99■□□□□ 0.31
VRK3-218ENST00000600031 CCDC94Q9BW85 323 aaPredicted RBP16.99■□□□□ 0.31
VRK3-218ENST00000600031 CUEDC2Q9H467 287 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 NRBP1Q9UHY1 535 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 ASTN1O14525 1302 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 BECN2A8MW95 431 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 IPO5O00410 1097 aaKnown RBP16.99■□□□□ 0.31
VRK3-218ENST00000600031 RIOK3O14730 519 aaKnown RBP16.99■□□□□ 0.31
VRK3-218ENST00000600031 GTPBP6O43824 516 aaPredicted RBP16.99■□□□□ 0.31
VRK3-218ENST00000600031 CCND2P30279 289 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 CCT6AP40227 531 aaKnown RBP16.99■□□□□ 0.31
VRK3-218ENST00000600031 HYIQ5T013 277 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 KCNK18Q7Z418 384 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 ZNF710Q8N1W2 664 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 CDK5RAP3Q96JB5 506 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 NAT10Q9H0A0 1025 aaKnown RBP16.99■□□□□ 0.31
VRK3-218ENST00000600031 PKD2L1Q9P0L9 805 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 PFASO15067 1338 aa16.99■□□□□ 0.31
VRK3-218ENST00000600031 GAS7O60861 476 aa16.98■□□□□ 0.31
VRK3-218ENST00000600031 MED24O75448 989 aa16.98■□□□□ 0.31
VRK3-218ENST00000600031 SMC2O95347 1197 aa16.98■□□□□ 0.31
VRK3-218ENST00000600031 MTMR1Q13613 665 aa16.98■□□□□ 0.31
VRK3-218ENST00000600031 XRRA1Q6P2D8 792 aa16.98■□□□□ 0.31
VRK3-218ENST00000600031 AGO4Q9HCK5 861 aaKnown RBP16.98■□□□□ 0.31
VRK3-218ENST00000600031 POTEB3A0JP26 581 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 TESPA1A2RU30 521 aaPredicted RBP16.97■□□□□ 0.31
VRK3-218ENST00000600031 LRMPQ12912 555 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 PPP2R5CQ13362 524 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 RGMBQ6NW40 437 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 POTEBQ6S5H4 581 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 ANKRD13CQ8N6S4 541 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
VRK3-218ENST00000600031 MAGEF1Q9HAY2 307 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 STK17AQ9UEE5 414 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 KDM3AQ9Y4C1 1321 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 CTIFO43310 598 aaKnown RBP16.97■□□□□ 0.31
VRK3-218ENST00000600031 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 COPB2P35606 906 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 FSTL1Q12841 308 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 ITGB3BPQ13352 177 aaPredicted RBP16.97■□□□□ 0.31
VRK3-218ENST00000600031 MORC3Q14149 939 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 MCM6Q14566 821 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 B3GNT9Q6UX72 402 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 CATSPER3Q86XQ3 398 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 DNERQ8NFT8 737 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 CACTINQ8WUQ7 758 aaKnown RBP16.97■□□□□ 0.31
VRK3-218ENST00000600031 RIT2Q99578 217 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 PORCNQ9H237 461 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 UNC45AQ9H3U1 944 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 KIAA1024Q9UPX6 916 aa16.97■□□□□ 0.31
VRK3-218ENST00000600031 SOWAHBA6NEL2 793 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 POTEB2H3BUK9 544 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 DHX15O43143 795 aaKnown RBP16.96■□□□□ 0.31
VRK3-218ENST00000600031 CHMP2AO43633 222 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 RGS20O76081 388 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 DHX8Q14562 1220 aaKnown RBP16.96■□□□□ 0.31
VRK3-218ENST00000600031 HAUS3Q68CZ6 603 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.31
VRK3-218ENST00000600031 GPRC5AQ8NFJ5 357 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 ERMNQ8TAM6 284 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 RAD54LQ92698 747 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 GSDMAQ96QA5 445 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 EIF2AK1Q9BQI3 630 aaKnown RBP16.96■□□□□ 0.31
VRK3-218ENST00000600031 TEKT3Q9BXF9 490 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 EFCC1Q9HA90 598 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 PAXBP1Q9Y5B6 917 aa16.96■□□□□ 0.31
VRK3-218ENST00000600031 SMTNL1A8MU46 457 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 SLC26A4O43511 780 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 ATP9AO75110 1047 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 RPA1P27694 616 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 ALDH5A1P51649 535 aaPredicted RBP16.96■□□□□ 0.3
VRK3-218ENST00000600031 SEMA3FQ13275 785 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 WDR78Q5VTH9 848 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 LRRC8AQ8IWT6 810 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 FAM133AQ8N9E0 248 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 TRIML1Q8N9V2 468 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 LARP4BQ92615 738 aaKnown RBP16.96■□□□□ 0.3
VRK3-218ENST00000600031 INPP4AQ96PE3 977 aaPredicted RBP16.96■□□□□ 0.3
VRK3-218ENST00000600031 NT5C3AQ9H0P0 336 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 MROH8Q9H579 483 aa16.96■□□□□ 0.3
VRK3-218ENST00000600031 POTEFA5A3E0 1075 aa16.95■□□□□ 0.3
VRK3-218ENST00000600031 DDX39AO00148 427 aaKnown RBP16.95■□□□□ 0.3
VRK3-218ENST00000600031 CYP4A11Q02928 519 aa16.95■□□□□ 0.3
VRK3-218ENST00000600031 SYCP1Q15431 976 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms