RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 UBA7P41226 1012 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 STAT6P42226 847 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 SARNPP82979 210 aaKnown RBP17.04■□□□□ 0.32
PNKP-204ENST00000594661 ZYXQ15942 572 aaKnown RBP17.04■□□□□ 0.32
PNKP-204ENST00000594661 USH1GQ495M9 461 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 FAM83BQ5T0W9 1011 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 LRRC15Q8TF66 581 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 AMNQ9BXJ7 453 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 GOPCQ9HD26 462 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 PRR12Q9ULL5 1215 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 SYNRGQ9UMZ2 1314 aa17.04■□□□□ 0.32
PNKP-204ENST00000594661 LRRIQ3A6PVS8 624 aaPredicted RBP17.03■□□□□ 0.32
PNKP-204ENST00000594661 FSBPO95073 299 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 TECP42680 631 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 CCT5P48643 541 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 STX17P56962 302 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 CUL4BQ13620 913 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 CALCRLQ16602 461 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 WLSQ5T9L3 541 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 FBXO11Q86XK2 927 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 N4BP2L2Q92802 583 aaPredicted RBP17.03■□□□□ 0.32
PNKP-204ENST00000594661 PLIN2Q99541 437 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 SH3BP1Q9Y3L3 701 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 PHF20L1A8MW92 1017 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
PNKP-204ENST00000594661 STAT2P52630 851 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 FAM43BQ6ZT52 329 aaPredicted RBP17.03■□□□□ 0.32
PNKP-204ENST00000594661 RASSF8Q8NHQ8 419 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 AK8Q96MA6 479 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 P2RX7Q99572 595 aaKnown RBP17.03■□□□□ 0.32
PNKP-204ENST00000594661 CDC23Q9UJX2 597 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 ATAD5Q96QE3 1844 aa17.03■□□□□ 0.32
PNKP-204ENST00000594661 PPP1R3GB7ZBB8 358 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 MEIS2O14770 477 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 NEBLO76041 1014 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 NF2P35240 595 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 TXKP42681 527 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 VSNL1P62760 191 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 SEMA3FQ13275 785 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 TNFAIP1Q13829 316 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 ZKSCAN8Q15776 578 aaPredicted RBP17.02■□□□□ 0.32
PNKP-204ENST00000594661 SPATA1Q5VX52 437 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 RRAGBQ5VZM2 374 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 CABP7Q86V35 215 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 GLT8D2Q9H1C3 349 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 VCPKMTQ9H867 229 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 HACL1Q9UJ83 578 aa17.02■□□□□ 0.32
PNKP-204ENST00000594661 RDXP35241 583 aaKnown RBP17.02■□□□□ 0.31
PNKP-204ENST00000594661 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.31
PNKP-204ENST00000594661 NAIF1Q69YI7 327 aaPredicted RBP17.02■□□□□ 0.31
PNKP-204ENST00000594661 PPP4R3AQ6IN85 833 aa17.02■□□□□ 0.31
PNKP-204ENST00000594661 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.31
PNKP-204ENST00000594661 STX10O60499 249 aa17.01■□□□□ 0.31
PNKP-204ENST00000594661 ASNSP08243 561 aa17.01■□□□□ 0.31
PNKP-204ENST00000594661 PAX7P23759 505 aa17.01■□□□□ 0.31
PNKP-204ENST00000594661 WDR93Q6P2C0 686 aa17.01■□□□□ 0.31
PNKP-204ENST00000594661 MMTAG2Q9BU76 263 aaKnown RBP17.01■□□□□ 0.31
PNKP-204ENST00000594661 ANO3Q9BYT9 981 aa17.01■□□□□ 0.31
PNKP-204ENST00000594661 OPLAHO14841 1288 aa17■□□□□ 0.31
PNKP-204ENST00000594661 PLCG1P19174 1290 aa17■□□□□ 0.31
PNKP-204ENST00000594661 SSR1P43307 286 aaKnown RBP17■□□□□ 0.31
PNKP-204ENST00000594661 GOLGA8FQ08AF8 430 aa17■□□□□ 0.31
PNKP-204ENST00000594661 GOLGA8DPQ0D2H9 430 aa17■□□□□ 0.31
PNKP-204ENST00000594661 GRIK3Q13003 919 aa17■□□□□ 0.31
PNKP-204ENST00000594661 DDX25Q9UHL0 483 aaKnown RBP17■□□□□ 0.31
PNKP-204ENST00000594661 CTNND2Q9UQB3 1225 aa17■□□□□ 0.31
PNKP-204ENST00000594661 RTN2O75298 545 aa17■□□□□ 0.31
PNKP-204ENST00000594661 RPN1P04843 607 aaKnown RBP17■□□□□ 0.31
PNKP-204ENST00000594661 FXR2P51116 673 aaKnown RBP eCLIP17■□□□□ 0.31
PNKP-204ENST00000594661 IRAK1P51617 712 aa17■□□□□ 0.31
PNKP-204ENST00000594661 TRIM6Q9C030 488 aaPredicted RBP17■□□□□ 0.31
PNKP-204ENST00000594661 DEFB129Q9H1M3 183 aa17■□□□□ 0.31
PNKP-204ENST00000594661 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
PNKP-204ENST00000594661 RMND1Q9NWS8 449 aa17■□□□□ 0.31
PNKP-204ENST00000594661 CAPN7Q9Y6W3 813 aa17■□□□□ 0.31
PNKP-204ENST00000594661 ZC3H4Q9UPT8 1303 aaKnown RBP17■□□□□ 0.31
PNKP-204ENST00000594661 SMCHD1A6NHR9 2005 aa17■□□□□ 0.31
PNKP-204ENST00000594661 TBX2Q13207 712 aaPredicted RBP16.99■□□□□ 0.31
PNKP-204ENST00000594661 SPECC1LQ69YQ0 1117 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 HAS1Q92839 578 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 GJA10Q969M2 543 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 BAG1Q99933 345 aaPredicted RBP16.99■□□□□ 0.31
PNKP-204ENST00000594661 ZNF341Q9BYN7 854 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 SH2D4AQ9H788 454 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 ODF2LQ9ULJ1 636 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 POTEMA6NI47 508 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 TBC1D8BQ0IIM8 1120 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 AP3B2Q13367 1082 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 NR1I3Q14994 352 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 TOGARAM2Q6ZUX3 1019 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 FBXO28Q9NVF7 368 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 KBTBD4Q9NVX7 518 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 LRWD1Q9UFC0 647 aa16.99■□□□□ 0.31
PNKP-204ENST00000594661 PUF60Q9UHX1 559 aaKnown RBP16.99■□□□□ 0.31
PNKP-204ENST00000594661 A0A1B0GTH6 734 aa16.98■□□□□ 0.31
PNKP-204ENST00000594661 NBPF12Q5TAG4 269 aaPredicted RBP16.98■□□□□ 0.31
PNKP-204ENST00000594661 ZNF658Q5TYW1 1059 aaPredicted RBP16.98■□□□□ 0.31
PNKP-204ENST00000594661 CCDC174Q6PII3 467 aa16.98■□□□□ 0.31
PNKP-204ENST00000594661 CRYGNQ8WXF5 182 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms