RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 JADE2Q9NQC1 790 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 R3HCC1Q9Y3T6 440 aaKnown RBP14.82□□□□□ -0.04
VRK3-205ENST00000593919 TLL2Q9Y6L7 1015 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 LRRC37A2A6NM11 1700 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 PLXNA1Q9UIW2 1896 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 TESPA1A2RU30 521 aaPredicted RBP14.82□□□□□ -0.04
VRK3-205ENST00000593919 GAS7O60861 476 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 ECM1Q16610 540 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 DPCR1Q3MIW9 517 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 NT5DC1Q5TFE4 455 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 XRRA1Q6P2D8 792 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
VRK3-205ENST00000593919 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.82□□□□□ -0.04
VRK3-205ENST00000593919 DNERQ8NFT8 737 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 SPATA20Q8TB22 786 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 PARK7Q99497 189 aaKnown RBP14.82□□□□□ -0.04
VRK3-205ENST00000593919 NAT10Q9H0A0 1025 aaKnown RBP14.82□□□□□ -0.04
VRK3-205ENST00000593919 PORCNQ9H237 461 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 CUEDC2Q9H467 287 aa14.82□□□□□ -0.04
VRK3-205ENST00000593919 DOCK3Q8IZD9 2030 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 KDM3AQ9Y4C1 1321 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 SLC10A3P09131 477 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 CCT6AP40227 531 aaKnown RBP14.81□□□□□ -0.04
VRK3-205ENST00000593919 SARSP49591 514 aaKnown RBP14.81□□□□□ -0.04
VRK3-205ENST00000593919 DPYDQ12882 1025 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 TMEM119Q4V9L6 283 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 WDR78Q5VTH9 848 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 ISM2Q6H9L7 571 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 OTOP1Q7RTM1 612 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 GPRC5AQ8NFJ5 357 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 SMARCE1Q969G3 411 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 KBTBD4Q9NVX7 518 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 NRBP1Q9UHY1 535 aa14.81□□□□□ -0.04
VRK3-205ENST00000593919 POTEB3A0JP26 581 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 MANSC4A6NHS7 340 aaPredicted RBP14.8□□□□□ -0.04
VRK3-205ENST00000593919 POTEB2H3BUK9 544 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 EML1O00423 815 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 GCLCP48506 637 aaPredicted RBP14.8□□□□□ -0.04
VRK3-205ENST00000593919 PPP2R5CQ13362 524 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 HYIQ5T013 277 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 HAUS3Q68CZ6 603 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 POTEBQ6S5H4 581 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 CCDC186Q7Z3E2 898 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 SHCBP1Q8NEM2 672 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 INPP4AQ96PE3 977 aaPredicted RBP14.8□□□□□ -0.04
VRK3-205ENST00000593919 BLZF1Q9H2G9 400 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 MROH8Q9H579 483 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 EFCC1Q9HA90 598 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 MAGEF1Q9HAY2 307 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 AGO4Q9HCK5 861 aaKnown RBP14.8□□□□□ -0.04
VRK3-205ENST00000593919 BLOC1S4Q9NUP1 217 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 PKD2L1Q9P0L9 805 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 STK17AQ9UEE5 414 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 ABT1Q9ULW3 272 aaKnown RBP14.8□□□□□ -0.04
VRK3-205ENST00000593919 PYCARDQ9ULZ3 195 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 IGF2BP3O00425 579 aaKnown RBP eCLIP14.8□□□□□ -0.04
VRK3-205ENST00000593919 CHMP2AO43633 222 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 MED24O75448 989 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 RGS20O76081 388 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 ALDH5A1P51649 535 aaPredicted RBP14.8□□□□□ -0.04
VRK3-205ENST00000593919 NLRP12P59046 1061 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 CUL4BQ13620 913 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 NOLC1Q14978 699 aaKnown RBP eCLIP14.8□□□□□ -0.04
VRK3-205ENST00000593919 SARM1Q6SZW1 724 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 KCNK18Q7Z418 384 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 FAM133AQ8N9E0 248 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 ERMNQ8TAM6 284 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 IWS1Q96ST2 819 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 MMP19Q99542 508 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 RIT2Q99578 217 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 TEKT3Q9BXF9 490 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 NT5C3AQ9H0P0 336 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 MORF4L1Q9UBU8 362 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 MAN1B1Q9UKM7 699 aa14.8□□□□□ -0.04
VRK3-205ENST00000593919 SOWAHBA6NEL2 793 aa14.79□□□□□ -0.04
VRK3-205ENST00000593919 FAM155AB1AL88 458 aaPredicted RBP14.79□□□□□ -0.04
VRK3-205ENST00000593919 GTPBP6O43824 516 aaPredicted RBP14.79□□□□□ -0.04
VRK3-205ENST00000593919 TOMM70O94826 608 aa14.79□□□□□ -0.04
VRK3-205ENST00000593919 SMC2O95347 1197 aa14.79□□□□□ -0.04
VRK3-205ENST00000593919 PGK2P07205 417 aa14.79□□□□□ -0.04
VRK3-205ENST00000593919 CCNA1P78396 465 aa14.79□□□□□ -0.04
VRK3-205ENST00000593919 FSTL1Q12841 308 aa14.79□□□□□ -0.04
VRK3-205ENST00000593919 ITGB3BPQ13352 177 aaPredicted RBP14.79□□□□□ -0.04
VRK3-205ENST00000593919 KCTD2Q14681 263 aa14.79□□□□□ -0.04
VRK3-205ENST00000593919 DNTTIP2Q5QJE6 756 aaKnown RBP14.79□□□□□ -0.04
VRK3-205ENST00000593919 B3GNT9Q6UX72 402 aa14.79□□□□□ -0.04
VRK3-205ENST00000593919 LARP4BQ92615 738 aaKnown RBP14.79□□□□□ -0.04
VRK3-205ENST00000593919 UNC45AQ9H3U1 944 aa14.79□□□□□ -0.04
VRK3-205ENST00000593919 POTEFA5A3E0 1075 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 TMEM88BA6NKF7 163 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 DDX39AO00148 427 aaKnown RBP14.78□□□□□ -0.04
VRK3-205ENST00000593919 DHX15O43143 795 aaKnown RBP14.78□□□□□ -0.04
VRK3-205ENST00000593919 SPATA31C1P0DKV0 1188 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 FCER1AP12319 257 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 BMP6P22004 513 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 RPA1P27694 616 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 CDC25BP30305 580 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 SEMA3FQ13275 785 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 POTEGQ6S5H5 508 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 CATSPER3Q86XQ3 398 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms