RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 SAMD3Q8N6K7 520 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 OSBPL7Q9BZF2 842 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 TUT1Q9H6E5 874 aaKnown RBP20.24■□□□□ 0.83
RETREG3-212ENST00000593251 EMSYQ7Z589 1322 aa20.24■□□□□ 0.83
RETREG3-212ENST00000593251 TREHO43280 583 aa20.23■□□□□ 0.83
RETREG3-212ENST00000593251 AMHP03971 560 aa20.23■□□□□ 0.83
RETREG3-212ENST00000593251 CTSHP09668 335 aa20.23■□□□□ 0.83
RETREG3-212ENST00000593251 MRPS9P82933 396 aaKnown RBP20.23■□□□□ 0.83
RETREG3-212ENST00000593251 TTC22Q5TAA0 569 aa20.23■□□□□ 0.83
RETREG3-212ENST00000593251 KHSRPQ92945 711 aaKnown RBP eCLIP20.23■□□□□ 0.83
RETREG3-212ENST00000593251 RNPEPQ9H4A4 650 aa20.23■□□□□ 0.83
RETREG3-212ENST00000593251 RTEL1Q9NZ71 1219 aa20.23■□□□□ 0.83
RETREG3-212ENST00000593251 TELO2Q9Y4R8 837 aa20.23■□□□□ 0.83
RETREG3-212ENST00000593251 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
RETREG3-212ENST00000593251 PNMA6FA0A0J9YX94 578 aa20.22■□□□□ 0.83
RETREG3-212ENST00000593251 ERICH2A1L162 156 aa20.22■□□□□ 0.83
RETREG3-212ENST00000593251 NOP56O00567 594 aaKnown RBP20.22■□□□□ 0.83
RETREG3-212ENST00000593251 MKRN4PQ13434 485 aaPredicted RBP20.22■□□□□ 0.83
RETREG3-212ENST00000593251 WTAPQ15007 396 aa20.22■□□□□ 0.83
RETREG3-212ENST00000593251 PLEKHG4Q58EX7 1191 aa20.22■□□□□ 0.83
RETREG3-212ENST00000593251 CYFIP1Q7L576 1253 aa20.22■□□□□ 0.83
RETREG3-212ENST00000593251 FBXO22Q8NEZ5 403 aa20.22■□□□□ 0.83
RETREG3-212ENST00000593251 ATG2AQ2TAZ0 1938 aa20.21■□□□□ 0.83
RETREG3-212ENST00000593251 HOXC8P31273 242 aa20.21■□□□□ 0.83
RETREG3-212ENST00000593251 TROAPQ12815 778 aa20.21■□□□□ 0.83
RETREG3-212ENST00000593251 TRAF1Q13077 416 aa20.21■□□□□ 0.83
RETREG3-212ENST00000593251 SEMA3FQ13275 785 aa20.21■□□□□ 0.83
RETREG3-212ENST00000593251 TRIM50Q86XT4 487 aa20.21■□□□□ 0.83
RETREG3-212ENST00000593251 LRFN3Q9BTN0 628 aa20.21■□□□□ 0.83
RETREG3-212ENST00000593251 UBE2ZQ9H832 354 aaPredicted RBP20.21■□□□□ 0.83
RETREG3-212ENST00000593251 U3KPZ7 1027 aaPredicted RBP20.21■□□□□ 0.83
RETREG3-212ENST00000593251 RALGAPA2Q2PPJ7 1873 aa20.21■□□□□ 0.83
RETREG3-212ENST00000593251 E7EWF7 191 aa20.2■□□□□ 0.82
RETREG3-212ENST00000593251 UPP2O95045 317 aa20.2■□□□□ 0.82
RETREG3-212ENST00000593251 PLA2G5P39877 138 aa20.2■□□□□ 0.82
RETREG3-212ENST00000593251 HTRA4P83105 476 aaPredicted RBP20.2■□□□□ 0.82
RETREG3-212ENST00000593251 GNPTABQ3T906 1256 aa20.2■□□□□ 0.82
RETREG3-212ENST00000593251 RALYLQ86SE5 291 aaKnown RBP20.2■□□□□ 0.82
RETREG3-212ENST00000593251 CD320Q9NPF0 282 aa20.2■□□□□ 0.82
RETREG3-212ENST00000593251 SETD4Q9NVD3 440 aa20.2■□□□□ 0.82
RETREG3-212ENST00000593251 FRMPD4Q14CM0 1322 aa20.2■□□□□ 0.82
RETREG3-212ENST00000593251 ICAM3P32942 547 aa20.19■□□□□ 0.82
RETREG3-212ENST00000593251 SP4Q02446 784 aa20.19■□□□□ 0.82
RETREG3-212ENST00000593251 UTP14CQ5TAP6 766 aaKnown RBP20.19■□□□□ 0.82
RETREG3-212ENST00000593251 METTL7BQ6UX53 244 aa20.19■□□□□ 0.82
RETREG3-212ENST00000593251 NCOA7Q8NI08 942 aa20.19■□□□□ 0.82
RETREG3-212ENST00000593251 SP7Q8TDD2 431 aaPredicted RBP20.19■□□□□ 0.82
RETREG3-212ENST00000593251 SEPT8Q92599 483 aa20.19■□□□□ 0.82
RETREG3-212ENST00000593251 FAM122AQ96E09 287 aa20.19■□□□□ 0.82
RETREG3-212ENST00000593251 INPP4AQ96PE3 977 aaPredicted RBP20.19■□□□□ 0.82
RETREG3-212ENST00000593251 GPR20Q99678 358 aa20.19■□□□□ 0.82
RETREG3-212ENST00000593251 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.18■□□□□ 0.82
RETREG3-212ENST00000593251 SPATA31C2B4DYI2 1134 aa20.18■□□□□ 0.82
RETREG3-212ENST00000593251 KCNA5P22460 613 aa20.18■□□□□ 0.82
RETREG3-212ENST00000593251 CHMLP26374 656 aa20.18■□□□□ 0.82
RETREG3-212ENST00000593251 ANTXR2P58335 489 aa20.18■□□□□ 0.82
RETREG3-212ENST00000593251 NEDD9Q14511 834 aa20.18■□□□□ 0.82
RETREG3-212ENST00000593251 USP17L6PQ6QN14 398 aa20.18■□□□□ 0.82
RETREG3-212ENST00000593251 CATIPQ7Z7H3 387 aa20.18■□□□□ 0.82
RETREG3-212ENST00000593251 MYL10Q9BUA6 226 aa20.18■□□□□ 0.82
RETREG3-212ENST00000593251 USP26Q9BXU7 913 aa20.18■□□□□ 0.82
RETREG3-212ENST00000593251 SUPT16HQ9Y5B9 1047 aaKnown RBP20.18■□□□□ 0.82
RETREG3-212ENST00000593251 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-212ENST00000593251 FAM86C2PA6NEL3 165 aa20.17■□□□□ 0.82
RETREG3-212ENST00000593251 FIBPO43427 364 aa20.17■□□□□ 0.82
RETREG3-212ENST00000593251 SART3Q15020 963 aaKnown RBP20.17■□□□□ 0.82
RETREG3-212ENST00000593251 EPC2Q52LR7 807 aa20.17■□□□□ 0.82
RETREG3-212ENST00000593251 SMARCC2Q8TAQ2 1214 aa20.17■□□□□ 0.82
RETREG3-212ENST00000593251 RUFY2Q8WXA3 655 aa20.17■□□□□ 0.82
RETREG3-212ENST00000593251 YME1L1Q96TA2 773 aa20.17■□□□□ 0.82
RETREG3-212ENST00000593251 LOXHD1Q8IVV2 1947 aa20.17■□□□□ 0.82
RETREG3-212ENST00000593251 STAM2O75886 525 aa20.16■□□□□ 0.82
RETREG3-212ENST00000593251 IL9P15248 144 aa20.16■□□□□ 0.82
RETREG3-212ENST00000593251 ARHGAP4P98171 946 aa20.16■□□□□ 0.82
RETREG3-212ENST00000593251 TMEM31Q5JXX7 168 aa20.16■□□□□ 0.82
RETREG3-212ENST00000593251 MB21D2Q8IYB1 491 aaPredicted RBP20.16■□□□□ 0.82
RETREG3-212ENST00000593251 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.16■□□□□ 0.82
RETREG3-212ENST00000593251 IGDCC4Q8TDY8 1250 aa20.16■□□□□ 0.82
RETREG3-212ENST00000593251 LMBR1Q8WVP7 490 aa20.16■□□□□ 0.82
RETREG3-212ENST00000593251 TOP1MTQ969P6 601 aa20.16■□□□□ 0.82
RETREG3-212ENST00000593251 MRPL38Q96DV4 380 aaKnown RBP20.16■□□□□ 0.82
RETREG3-212ENST00000593251 CAND2O75155 1236 aa20.15■□□□□ 0.82
RETREG3-212ENST00000593251 GNAT1P11488 350 aa20.15■□□□□ 0.82
RETREG3-212ENST00000593251 GPM6BQ13491 265 aa20.15■□□□□ 0.82
RETREG3-212ENST00000593251 LEXMQ3ZCV2 418 aa20.15■□□□□ 0.82
RETREG3-212ENST00000593251 IFIH1Q9BYX4 1025 aaKnown RBP20.15■□□□□ 0.82
RETREG3-212ENST00000593251 C11orf16Q9NQ32 467 aa20.15■□□□□ 0.82
RETREG3-212ENST00000593251 ZNF215Q9UL58 517 aaPredicted RBP20.15■□□□□ 0.82
RETREG3-212ENST00000593251 MYO7AQ13402 2215 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 COL4A6Q14031 1691 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 MEIS2O14770 477 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 ADAM17P78536 824 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 PCNX4Q63HM2 1172 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 FAM178BQ8IXR5 827 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 TMEM192Q8IY95 271 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 ZNF654Q8IZM8 581 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 CUL5Q93034 780 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 RRP36Q96EU6 259 aaKnown RBP20.14■□□□□ 0.81
RETREG3-212ENST00000593251 SPZ1Q9BXG8 430 aa20.14■□□□□ 0.81
RETREG3-212ENST00000593251 LY9Q9HBG7 655 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms