RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NEDD9Q14511 834 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 CYFIP1Q7L576 1253 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 SERINC5Q86VE9 423 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 ADAMTS19Q8TE59 1207 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 LSG1Q9H089 658 aaKnown RBP23.61■■□□□ 1.37
TRIM47-207ENST00000593089 TTC28Q96AY4 2481 aa23.61■■□□□ 1.37
TRIM47-207ENST00000593089 PRRC2BQ5JSZ5 2229 aaKnown RBP23.61■■□□□ 1.37
TRIM47-207ENST00000593089 COL4A4P53420 1690 aaPredicted RBP23.6■■□□□ 1.37
TRIM47-207ENST00000593089 SH2B2O14492 632 aaPredicted RBP23.6■■□□□ 1.37
TRIM47-207ENST00000593089 FIBPO43427 364 aa23.6■■□□□ 1.37
TRIM47-207ENST00000593089 SMIM10L2AP0DMW4 78 aa23.6■■□□□ 1.37
TRIM47-207ENST00000593089 SMIM10L2BP0DMW5 78 aa23.6■■□□□ 1.37
TRIM47-207ENST00000593089 RXRAP19793 462 aa23.6■■□□□ 1.37
TRIM47-207ENST00000593089 MCM5P33992 734 aa23.6■■□□□ 1.37
TRIM47-207ENST00000593089 COL9A3Q14050 684 aaPredicted RBP23.6■■□□□ 1.37
TRIM47-207ENST00000593089 METTL7BQ6UX53 244 aa23.6■■□□□ 1.37
TRIM47-207ENST00000593089 CMTR1Q8N1G2 835 aaKnown RBP23.6■■□□□ 1.37
TRIM47-207ENST00000593089 ATP6V0A1Q93050 837 aa23.6■■□□□ 1.37
TRIM47-207ENST00000593089 MTA3Q9BTC8 594 aa23.6■■□□□ 1.37
TRIM47-207ENST00000593089 RSPH10B2B2RC85 870 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 SLC27A2O14975 620 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 EFCAB14O75071 495 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 LGR5O75473 907 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 RSPH10BP0C881 870 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 SMARCA1P28370 1054 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 TFF2Q03403 129 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 GRB10Q13322 594 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 FAM117BQ6P1L5 589 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 RAB11FIP4Q86YS3 637 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 SRBD1Q8N5C6 995 aaKnown RBP23.59■■□□□ 1.37
TRIM47-207ENST00000593089 TMEM87BQ96K49 555 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 GPR20Q99678 358 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 LZTS2Q9BRK4 669 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 ESYT1Q9BSJ8 1104 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 USP26Q9BXU7 913 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 RNPEPQ9H4A4 650 aa23.59■■□□□ 1.37
TRIM47-207ENST00000593089 MEIS2O14770 477 aa23.58■■□□□ 1.37
TRIM47-207ENST00000593089 TREHO43280 583 aa23.58■■□□□ 1.37
TRIM47-207ENST00000593089 GJB5O95377 273 aa23.58■■□□□ 1.37
TRIM47-207ENST00000593089 GNAQP50148 359 aa23.58■■□□□ 1.37
TRIM47-207ENST00000593089 SP4Q02446 784 aa23.58■■□□□ 1.37
TRIM47-207ENST00000593089 UTP14CQ5TAP6 766 aaKnown RBP23.58■■□□□ 1.37
TRIM47-207ENST00000593089 PCNX4Q63HM2 1172 aa23.58■■□□□ 1.37
TRIM47-207ENST00000593089 TMTC2Q8N394 836 aa23.58■■□□□ 1.37
TRIM47-207ENST00000593089 TELO2Q9Y4R8 837 aa23.58■■□□□ 1.37
TRIM47-207ENST00000593089 EMSYQ7Z589 1322 aa23.58■■□□□ 1.36
TRIM47-207ENST00000593089 PIK3CDO00329 1044 aa23.57■■□□□ 1.36
TRIM47-207ENST00000593089 CREB3L3Q68CJ9 461 aa23.57■■□□□ 1.36
TRIM47-207ENST00000593089 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.57■■□□□ 1.36
TRIM47-207ENST00000593089 TRIM50Q86XT4 487 aa23.57■■□□□ 1.36
TRIM47-207ENST00000593089 DBF4BQ8NFT6 615 aa23.57■■□□□ 1.36
TRIM47-207ENST00000593089 UHRF1Q96T88 793 aaPredicted RBP23.57■■□□□ 1.36
TRIM47-207ENST00000593089 RAD9AQ99638 391 aa23.57■■□□□ 1.36
TRIM47-207ENST00000593089 LRRC2Q9BYS8 371 aa23.57■■□□□ 1.36
TRIM47-207ENST00000593089 MTUS1Q9ULD2 1270 aa23.57■■□□□ 1.36
TRIM47-207ENST00000593089 TCF20Q9UGU0 1960 aaKnown RBP23.57■■□□□ 1.36
TRIM47-207ENST00000593089 REV3LO60673 3130 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 MICAL3Q7RTP6 2002 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 hCG_1642624A0A1W2PR95 340 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 CALM1P0DP23 149 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 CALM2P0DP24 149 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 CALM3P0DP25 149 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 HOXC8P31273 242 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 NLRX1Q86UT6 975 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 GDPD5Q8WTR4 605 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 ANO2Q9NQ90 1003 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 SETD4Q9NVD3 440 aa23.56■■□□□ 1.36
TRIM47-207ENST00000593089 TRANK1O15050 2925 aa23.55■■□□□ 1.36
TRIM47-207ENST00000593089 LPXNO60711 386 aa23.55■■□□□ 1.36
TRIM47-207ENST00000593089 CTSHP09668 335 aa23.55■■□□□ 1.36
TRIM47-207ENST00000593089 LIFRP42702 1097 aa23.55■■□□□ 1.36
TRIM47-207ENST00000593089 XRRA1Q6P2D8 792 aa23.55■■□□□ 1.36
TRIM47-207ENST00000593089 CCDC82Q8N4S0 544 aa23.55■■□□□ 1.36
TRIM47-207ENST00000593089 PSTPIP2Q9H939 334 aa23.55■■□□□ 1.36
TRIM47-207ENST00000593089 ZNF215Q9UL58 517 aaPredicted RBP23.55■■□□□ 1.36
TRIM47-207ENST00000593089 SLC12A7Q9Y666 1083 aa23.55■■□□□ 1.36
TRIM47-207ENST00000593089 KCNQ1P51787 676 aa23.54■■□□□ 1.36
TRIM47-207ENST00000593089 NECTIN1Q15223 517 aa23.54■■□□□ 1.36
TRIM47-207ENST00000593089 UBE2SQ16763 222 aa23.54■■□□□ 1.36
TRIM47-207ENST00000593089 AAK1Q2M2I8 961 aa23.54■■□□□ 1.36
TRIM47-207ENST00000593089 PLEKHG4Q58EX7 1191 aa23.54■■□□□ 1.36
TRIM47-207ENST00000593089 MYOCDQ8IZQ8 938 aa23.54■■□□□ 1.36
TRIM47-207ENST00000593089 SENP7Q9BQF6 1050 aa23.54■■□□□ 1.36
TRIM47-207ENST00000593089 SIP14410 1827 aa23.54■■□□□ 1.36
TRIM47-207ENST00000593089 LINC01553A4QN01 128 aa23.53■■□□□ 1.36
TRIM47-207ENST00000593089 AMHP03971 560 aa23.53■■□□□ 1.36
TRIM47-207ENST00000593089 GNAT1P11488 350 aa23.53■■□□□ 1.36
TRIM47-207ENST00000593089 NECAB3Q96P71 396 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-207ENST00000593089 TGS1Q96RS0 853 aaKnown RBP23.53■■□□□ 1.36
TRIM47-207ENST00000593089 OSBPL7Q9BZF2 842 aa23.53■■□□□ 1.36
TRIM47-207ENST00000593089 MUC3AQ02505 3323 aa23.53■■□□□ 1.36
TRIM47-207ENST00000593089 BMP1P13497 986 aa23.52■■□□□ 1.36
TRIM47-207ENST00000593089 ARHGAP4P98171 946 aa23.52■■□□□ 1.36
TRIM47-207ENST00000593089 MICU3Q86XE3 530 aa23.52■■□□□ 1.36
TRIM47-207ENST00000593089 FANCBQ8NB91 859 aa23.52■■□□□ 1.36
TRIM47-207ENST00000593089 GIMAP8Q8ND71 665 aaPredicted RBP23.52■■□□□ 1.36
TRIM47-207ENST00000593089 GPRASP2Q96D09 838 aa23.52■■□□□ 1.36
TRIM47-207ENST00000593089 SUGCTQ9HAC7 445 aa23.52■■□□□ 1.36
TRIM47-207ENST00000593089 KAT6AQ92794 2004 aa23.51■■□□□ 1.35
TRIM47-207ENST00000593089 ATP9AO75110 1047 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms